RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
ATXN2-227ENST00000616825 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.27
ATXN2-227ENST00000616825 NISCHQ9Y2I1 1504 aa28.71■■■□□ 2.19
ATXN2-227ENST00000616825 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
ATXN2-227ENST00000616825 EHMT2Q96KQ7 1210 aa28.24■■■□□ 2.11
ATXN2-227ENST00000616825 APLP2Q06481 763 aa27.97■■■□□ 2.07
ATXN2-227ENST00000616825 PELP1Q8IZL8 1130 aaKnown RBP27.85■■■□□ 2.05
ATXN2-227ENST00000616825 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
ATXN2-227ENST00000616825 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
ATXN2-227ENST00000616825 PCGF6Q9BYE7 350 aa27.2■■□□□ 1.95
ATXN2-227ENST00000616825 RANGAP1P46060 587 aaPredicted RBP27.07■■□□□ 1.92
ATXN2-227ENST00000616825 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
ATXN2-227ENST00000616825 ATP1B4Q9UN42 357 aaPredicted RBP26.92■■□□□ 1.9
ATXN2-227ENST00000616825 ZEB1P37275 1124 aaPredicted RBP26.86■■□□□ 1.89
ATXN2-227ENST00000616825 CCER1Q8TC90 406 aaPredicted RBP26.85■■□□□ 1.89
ATXN2-227ENST00000616825 CENPBP07199 599 aaPredicted RBP26.84■■□□□ 1.89
ATXN2-227ENST00000616825 UBTFP17480 764 aaKnown RBP26.83■■□□□ 1.89
ATXN2-227ENST00000616825 ERICH6Q7L0X2 663 aa26.6■■□□□ 1.85
ATXN2-227ENST00000616825 NEFLP07196 543 aa26.37■■□□□ 1.81
ATXN2-227ENST00000616825 PPARGC1BQ86YN6 1023 aaKnown RBP26.19■■□□□ 1.78
ATXN2-227ENST00000616825 YTHDC1Q96MU7 727 aaKnown RBP26.15■■□□□ 1.78
ATXN2-227ENST00000616825 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
ATXN2-227ENST00000616825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
ATXN2-227ENST00000616825 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
ATXN2-227ENST00000616825 MYT1LQ9UL68 1186 aa25.98■■□□□ 1.75
ATXN2-227ENST00000616825 ITGAEP38570 1179 aa25.96■■□□□ 1.75
ATXN2-227ENST00000616825 POLR3GLQ9BT43 218 aa25.81■■□□□ 1.72
ATXN2-227ENST00000616825 LOC105371045A0A1W2PR82 267 aa25.73■■□□□ 1.71
ATXN2-227ENST00000616825 HRCP23327 699 aa25.71■■□□□ 1.71
ATXN2-227ENST00000616825 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
ATXN2-227ENST00000616825 DAXXQ9UER7 740 aaPredicted RBP25.63■■□□□ 1.69
ATXN2-227ENST00000616825 MYT1Q01538 1121 aa25.57■■□□□ 1.68
ATXN2-227ENST00000616825 CNGB1Q14028 1251 aaPredicted RBP25.53■■□□□ 1.68
ATXN2-227ENST00000616825 SLC4A1APQ9BWU0 796 aaKnown RBP25.36■■□□□ 1.65
ATXN2-227ENST00000616825 FAM50AQ14320 339 aaKnown RBP25.26■■□□□ 1.63
ATXN2-227ENST00000616825 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
ATXN2-227ENST00000616825 TRIM52Q96A61 297 aa25.18■■□□□ 1.62
ATXN2-227ENST00000616825 DIEXFQ68CQ4 756 aaKnown RBP25.15■■□□□ 1.62
ATXN2-227ENST00000616825 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.61
ATXN2-227ENST00000616825 ABCC9O60706 1549 aa25.02■■□□□ 1.6
ATXN2-227ENST00000616825 NEUROD1Q13562 356 aa25.02■■□□□ 1.6
ATXN2-227ENST00000616825 ZNF316A6NFI3 1004 aaPredicted RBP24.95■■□□□ 1.58
ATXN2-227ENST00000616825 RTL5Q5HYW3 569 aaPredicted RBP24.93■■□□□ 1.58
ATXN2-227ENST00000616825 FBLN2P98095 1184 aa24.91■■□□□ 1.58
ATXN2-227ENST00000616825 ZNF326Q5BKZ1 582 aaKnown RBP24.9■■□□□ 1.58
ATXN2-227ENST00000616825 ANP32CO43423 234 aa24.81■■□□□ 1.56
ATXN2-227ENST00000616825 ZBTB47Q9UFB7 747 aaPredicted RBP24.72■■□□□ 1.55
ATXN2-227ENST00000616825 CSRNP3Q8WYN3 585 aa24.66■■□□□ 1.54
ATXN2-227ENST00000616825 P3H3Q8IVL6 736 aa24.63■■□□□ 1.53
ATXN2-227ENST00000616825 BCANQ96GW7 911 aa24.62■■□□□ 1.53
ATXN2-227ENST00000616825 NEFMP07197 916 aa24.58■■□□□ 1.53
ATXN2-227ENST00000616825 ARID3CA6NKF2 412 aa24.56■■□□□ 1.52
ATXN2-227ENST00000616825 CDK11AQ9UQ88 783 aaPredicted RBP24.55■■□□□ 1.52
ATXN2-227ENST00000616825 GTF3C3Q9Y5Q9 886 aa24.52■■□□□ 1.52
ATXN2-227ENST00000616825 SLC24A1O60721 1099 aa24.51■■□□□ 1.51
ATXN2-227ENST00000616825 CANXP27824 592 aaKnown RBP24.5■■□□□ 1.51
ATXN2-227ENST00000616825 ZNF777Q9ULD5 760 aaPredicted RBP24.49■■□□□ 1.51
ATXN2-227ENST00000616825 BCL11AQ9H165 835 aa24.4■■□□□ 1.5
ATXN2-227ENST00000616825 ESF1Q9H501 851 aaKnown RBP24.34■■□□□ 1.49
ATXN2-227ENST00000616825 CHGAP10645 457 aaKnown RBP24.21■■□□□ 1.47
ATXN2-227ENST00000616825 NPM1P06748 294 aaKnown RBP eCLIP24.2■■□□□ 1.46
ATXN2-227ENST00000616825 TONSLQ96HA7 1378 aa24.2■■□□□ 1.46
ATXN2-227ENST00000616825 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
ATXN2-227ENST00000616825 STAG3Q9UJ98 1225 aa24.18■■□□□ 1.46
ATXN2-227ENST00000616825 ANP32AP39687 249 aaKnown RBP24.16■■□□□ 1.46
ATXN2-227ENST00000616825 ACIN1Q9UKV3 1341 aaKnown RBP24.14■■□□□ 1.46
ATXN2-227ENST00000616825 HNRNPUQ00839 825 aaKnown RBP eCLIP24.03■■□□□ 1.44
ATXN2-227ENST00000616825 DDX10Q13206 875 aaKnown RBP24.02■■□□□ 1.44
ATXN2-227ENST00000616825 NPM2Q86SE8 214 aaKnown RBP24■■□□□ 1.43
ATXN2-227ENST00000616825 TSPY4P0CV99 314 aa24■■□□□ 1.43
ATXN2-227ENST00000616825 TSPY10P0CW01 314 aa24■■□□□ 1.43
ATXN2-227ENST00000616825 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
ATXN2-227ENST00000616825 CHIC2Q9UKJ5 165 aa23.98■■□□□ 1.43
ATXN2-227ENST00000616825 FAM9BQ8IZU0 186 aa23.97■■□□□ 1.43
ATXN2-227ENST00000616825 FKBP8Q14318 412 aa23.95■■□□□ 1.43
ATXN2-227ENST00000616825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.95■■□□□ 1.433e-7■■□□□ 13.5
ATXN2-227ENST00000616825 HSP90AA1P07900 732 aaKnown RBP23.94■■□□□ 1.42
ATXN2-227ENST00000616825 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
ATXN2-227ENST00000616825 TMC1Q8TDI8 760 aa23.93■■□□□ 1.42
ATXN2-227ENST00000616825 UPF2Q9HAU5 1272 aaKnown RBP23.92■■□□□ 1.42
ATXN2-227ENST00000616825 SALL2Q9Y467 1007 aaPredicted RBP23.9■■□□□ 1.42
ATXN2-227ENST00000616825 MTUS2Q5JR59 1369 aa23.84■■□□□ 1.41
ATXN2-227ENST00000616825 ANP32BQ92688 251 aaKnown RBP23.84■■□□□ 1.41
ATXN2-227ENST00000616825 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.83■■□□□ 1.41
ATXN2-227ENST00000616825 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
ATXN2-227ENST00000616825 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
ATXN2-227ENST00000616825 WDR43Q15061 677 aaKnown RBP eCLIP23.78■■□□□ 1.4
ATXN2-227ENST00000616825 CCDC136Q96JN2 1154 aa23.78■■□□□ 1.4
ATXN2-227ENST00000616825 MRS2Q9HD23 443 aa23.77■■□□□ 1.4
ATXN2-227ENST00000616825 DCAF1Q9Y4B6 1507 aa23.7■■□□□ 1.39
ATXN2-227ENST00000616825 EIF4G2P78344 907 aaKnown RBP eCLIP23.65■■□□□ 1.383e-9■■■■□ 21.5
ATXN2-227ENST00000616825 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
ATXN2-227ENST00000616825 CLIP1P30622 1438 aa23.62■■□□□ 1.37
ATXN2-227ENST00000616825 PLEKHD1A6NEE1 506 aa23.6■■□□□ 1.37
ATXN2-227ENST00000616825 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
ATXN2-227ENST00000616825 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
ATXN2-227ENST00000616825 KCNH8Q96L42 1107 aa23.57■■□□□ 1.36
ATXN2-227ENST00000616825 HIRIP3Q9BW71 556 aaPredicted RBP23.56■■□□□ 1.36
ATXN2-227ENST00000616825 PPP1R15AO75807 674 aaPredicted RBP23.53■■□□□ 1.36
ATXN2-227ENST00000616825 MYH16Q9H6N6 1097 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms