Protein–RNA interactions for Protein: Q9Y5U5

TNFRSF18, Tumor necrosis factor receptor superfamily member 18, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18Q9Y5U5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF18Q9Y5U5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF18Q9Y5U5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF18Q9Y5U5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF18Q9Y5U5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF18Q9Y5U5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF18Q9Y5U5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF18Q9Y5U5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.09■□□□□ 0.65
TNFRSF18Q9Y5U5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TNFRSF18Q9Y5U5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TNFRSF18Q9Y5U5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF18Q9Y5U5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TNFRSF18Q9Y5U5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF18Q9Y5U5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TNFRSF18Q9Y5U5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TNFRSF18Q9Y5U5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TNFRSF18Q9Y5U5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF18Q9Y5U5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFRSF18Q9Y5U5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFRSF18Q9Y5U5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFRSF18Q9Y5U5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF18Q9Y5U5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFRSF18Q9Y5U5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TNFRSF18Q9Y5U5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF18Q9Y5U5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFRSF18Q9Y5U5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TNFRSF18Q9Y5U5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF18Q9Y5U5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TNFRSF18Q9Y5U5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF18Q9Y5U5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFRSF18Q9Y5U5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFRSF18Q9Y5U5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFRSF18Q9Y5U5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF18Q9Y5U5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF18Q9Y5U5 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF18Q9Y5U5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFRSF18Q9Y5U5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TNFRSF18Q9Y5U5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF18Q9Y5U5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19■□□□□ 0.63
TNFRSF18Q9Y5U5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF18Q9Y5U5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TNFRSF18Q9Y5U5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFRSF18Q9Y5U5 RARRES2P7-201ENST00000567349 469 ntBASIC18.99■□□□□ 0.63
TNFRSF18Q9Y5U5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFRSF18Q9Y5U5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.98■□□□□ 0.63
TNFRSF18Q9Y5U5 ST7-AS1-201ENST00000456775 1889 ntBASIC18.98■□□□□ 0.63
TNFRSF18Q9Y5U5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF18Q9Y5U5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TNFRSF18Q9Y5U5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF18Q9Y5U5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TNFRSF18Q9Y5U5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF18Q9Y5U5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TNFRSF18Q9Y5U5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.96■□□□□ 0.63
TNFRSF18Q9Y5U5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.95■□□□□ 0.62
TNFRSF18Q9Y5U5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF18Q9Y5U5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.95■□□□□ 0.62
TNFRSF18Q9Y5U5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TNFRSF18Q9Y5U5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TNFRSF18Q9Y5U5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC18.94■□□□□ 0.62
TNFRSF18Q9Y5U5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.94■□□□□ 0.62
TNFRSF18Q9Y5U5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TNFRSF18Q9Y5U5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TNFRSF18Q9Y5U5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF18Q9Y5U5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TNFRSF18Q9Y5U5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF18Q9Y5U5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TNFRSF18Q9Y5U5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.92■□□□□ 0.62
TNFRSF18Q9Y5U5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF18Q9Y5U5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.91■□□□□ 0.62
TNFRSF18Q9Y5U5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.91■□□□□ 0.62
TNFRSF18Q9Y5U5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF18Q9Y5U5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TNFRSF18Q9Y5U5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
TNFRSF18Q9Y5U5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF18Q9Y5U5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF18Q9Y5U5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TNFRSF18Q9Y5U5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TNFRSF18Q9Y5U5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.9■□□□□ 0.62
TNFRSF18Q9Y5U5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.9■□□□□ 0.62
TNFRSF18Q9Y5U5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TNFRSF18Q9Y5U5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.89■□□□□ 0.61
TNFRSF18Q9Y5U5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF18Q9Y5U5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TNFRSF18Q9Y5U5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TNFRSF18Q9Y5U5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TNFRSF18Q9Y5U5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF18Q9Y5U5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF18Q9Y5U5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.88■□□□□ 0.61
TNFRSF18Q9Y5U5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TNFRSF18Q9Y5U5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TNFRSF18Q9Y5U5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF18Q9Y5U5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF18Q9Y5U5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.86■□□□□ 0.61
TNFRSF18Q9Y5U5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFRSF18Q9Y5U5 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TNFRSF18Q9Y5U5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.85■□□□□ 0.61
TNFRSF18Q9Y5U5 SETD8P1-201ENST00000623146 1180 ntBASIC18.85■□□□□ 0.61
TNFRSF18Q9Y5U5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFRSF18Q9Y5U5 AL135925.1-201ENST00000605920 1701 ntBASIC18.84■□□□□ 0.61
TNFRSF18Q9Y5U5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms