Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
LSMEM2Q8N112 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
LSMEM2Q8N112 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.72■■□□□ 1.87
LSMEM2Q8N112 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
LSMEM2Q8N112 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
LSMEM2Q8N112 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.7■■□□□ 1.86
LSMEM2Q8N112 MIR7108-201ENST00000614319 87 ntBASIC26.7■■□□□ 1.86
LSMEM2Q8N112 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.7■■□□□ 1.86
LSMEM2Q8N112 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
LSMEM2Q8N112 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.68■■□□□ 1.86
LSMEM2Q8N112 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
LSMEM2Q8N112 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.67■■□□□ 1.86
LSMEM2Q8N112 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LSMEM2Q8N112 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
LSMEM2Q8N112 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
LSMEM2Q8N112 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.66■■□□□ 1.86
LSMEM2Q8N112 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LSMEM2Q8N112 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
LSMEM2Q8N112 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
LSMEM2Q8N112 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.63■■□□□ 1.85
LSMEM2Q8N112 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
LSMEM2Q8N112 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
LSMEM2Q8N112 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LSMEM2Q8N112 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
LSMEM2Q8N112 ABCB10P3-201ENST00000561950 2166 ntBASIC26.62■■□□□ 1.85
LSMEM2Q8N112 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LSMEM2Q8N112 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.61■■□□□ 1.85
LSMEM2Q8N112 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
LSMEM2Q8N112 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.6■■□□□ 1.85
LSMEM2Q8N112 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LSMEM2Q8N112 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
LSMEM2Q8N112 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.59■■□□□ 1.85
LSMEM2Q8N112 AC087741.3-201ENST00000624270 1347 ntBASIC26.59■■□□□ 1.85
LSMEM2Q8N112 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LSMEM2Q8N112 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.58■■□□□ 1.85
LSMEM2Q8N112 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LSMEM2Q8N112 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LSMEM2Q8N112 AC044849.2-201ENST00000606596 710 ntBASIC26.57■■□□□ 1.84
LSMEM2Q8N112 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LSMEM2Q8N112 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LSMEM2Q8N112 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.55■■□□□ 1.84
LSMEM2Q8N112 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
LSMEM2Q8N112 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.55■■□□□ 1.84
LSMEM2Q8N112 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LSMEM2Q8N112 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LSMEM2Q8N112 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
LSMEM2Q8N112 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LSMEM2Q8N112 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LSMEM2Q8N112 DUX4L28-201ENST00000623687 678 ntBASIC26.52■■□□□ 1.84
LSMEM2Q8N112 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.51■■□□□ 1.83
LSMEM2Q8N112 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
LSMEM2Q8N112 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.5■■□□□ 1.83
LSMEM2Q8N112 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
LSMEM2Q8N112 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
LSMEM2Q8N112 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LSMEM2Q8N112 MIR762-201ENST00000390236 83 ntBASIC26.49■■□□□ 1.83
LSMEM2Q8N112 AC005559.1-201ENST00000589661 871 ntBASIC26.48■■□□□ 1.83
LSMEM2Q8N112 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LSMEM2Q8N112 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LSMEM2Q8N112 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
LSMEM2Q8N112 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LSMEM2Q8N112 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.46■■□□□ 1.83
LSMEM2Q8N112 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LSMEM2Q8N112 HLA-V-202ENST00000446817 847 ntBASIC26.45■■□□□ 1.82
LSMEM2Q8N112 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.45■■□□□ 1.82
LSMEM2Q8N112 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
LSMEM2Q8N112 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LSMEM2Q8N112 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LSMEM2Q8N112 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.44■■□□□ 1.82
LSMEM2Q8N112 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
LSMEM2Q8N112 AC139426.1-201ENST00000568218 2529 ntBASIC26.43■■□□□ 1.82
LSMEM2Q8N112 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LSMEM2Q8N112 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.42■■□□□ 1.82
LSMEM2Q8N112 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LSMEM2Q8N112 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.42■■□□□ 1.82
LSMEM2Q8N112 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
LSMEM2Q8N112 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
LSMEM2Q8N112 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LSMEM2Q8N112 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
LSMEM2Q8N112 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.4■■□□□ 1.82
LSMEM2Q8N112 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.4■■□□□ 1.82
LSMEM2Q8N112 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LSMEM2Q8N112 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
LSMEM2Q8N112 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
LSMEM2Q8N112 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LSMEM2Q8N112 AL161658.1-201ENST00000623641 1967 ntBASIC26.37■■□□□ 1.81
LSMEM2Q8N112 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LSMEM2Q8N112 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.37■■□□□ 1.81
LSMEM2Q8N112 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LSMEM2Q8N112 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LSMEM2Q8N112 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
LSMEM2Q8N112 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
LSMEM2Q8N112 ST7-AS1-201ENST00000456775 1889 ntBASIC26.35■■□□□ 1.81
LSMEM2Q8N112 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.35■■□□□ 1.81
LSMEM2Q8N112 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.34■■□□□ 1.81
LSMEM2Q8N112 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.34■■□□□ 1.81
LSMEM2Q8N112 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
LSMEM2Q8N112 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LSMEM2Q8N112 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LSMEM2Q8N112 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms