Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-1A0A0K0K1D8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
TRBV6-1A0A0K0K1D8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV6-1A0A0K0K1D8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.05■□□□□ 0.8
TRBV6-1A0A0K0K1D8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-1A0A0K0K1D8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV6-1A0A0K0K1D8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.03■□□□□ 0.8
TRBV6-1A0A0K0K1D8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV6-1A0A0K0K1D8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-1A0A0K0K1D8 AC006077.2-201ENST00000623591 457 ntBASIC20.02■□□□□ 0.8
TRBV6-1A0A0K0K1D8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.02■□□□□ 0.8
TRBV6-1A0A0K0K1D8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
TRBV6-1A0A0K0K1D8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV6-1A0A0K0K1D8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRBV6-1A0A0K0K1D8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-1A0A0K0K1D8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-1A0A0K0K1D8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-1A0A0K0K1D8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-1A0A0K0K1D8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRBV6-1A0A0K0K1D8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-1A0A0K0K1D8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-1A0A0K0K1D8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-1A0A0K0K1D8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-1A0A0K0K1D8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV6-1A0A0K0K1D8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV6-1A0A0K0K1D8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV6-1A0A0K0K1D8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV6-1A0A0K0K1D8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-1A0A0K0K1D8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV6-1A0A0K0K1D8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-1A0A0K0K1D8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-1A0A0K0K1D8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-1A0A0K0K1D8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.96■□□□□ 0.79
TRBV6-1A0A0K0K1D8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-1A0A0K0K1D8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
TRBV6-1A0A0K0K1D8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-1A0A0K0K1D8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-1A0A0K0K1D8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-1A0A0K0K1D8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-1A0A0K0K1D8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV6-1A0A0K0K1D8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV6-1A0A0K0K1D8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV6-1A0A0K0K1D8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
TRBV6-1A0A0K0K1D8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV6-1A0A0K0K1D8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TRBV6-1A0A0K0K1D8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV6-1A0A0K0K1D8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV6-1A0A0K0K1D8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV6-1A0A0K0K1D8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV6-1A0A0K0K1D8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV6-1A0A0K0K1D8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV6-1A0A0K0K1D8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.89■□□□□ 0.77
TRBV6-1A0A0K0K1D8 AL139393.2-201ENST00000608721 2025 ntBASIC19.88■□□□□ 0.77
TRBV6-1A0A0K0K1D8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV6-1A0A0K0K1D8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV6-1A0A0K0K1D8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV6-1A0A0K0K1D8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.87■□□□□ 0.77
TRBV6-1A0A0K0K1D8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV6-1A0A0K0K1D8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRBV6-1A0A0K0K1D8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-1A0A0K0K1D8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-1A0A0K0K1D8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV6-1A0A0K0K1D8 DRD5P2-201ENST00000421395 2012 ntBASIC19.84■□□□□ 0.77
TRBV6-1A0A0K0K1D8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV6-1A0A0K0K1D8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.83■□□□□ 0.77
TRBV6-1A0A0K0K1D8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV6-1A0A0K0K1D8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-1A0A0K0K1D8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-1A0A0K0K1D8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-1A0A0K0K1D8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-1A0A0K0K1D8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-1A0A0K0K1D8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRBV6-1A0A0K0K1D8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-1A0A0K0K1D8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-1A0A0K0K1D8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-1A0A0K0K1D8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-1A0A0K0K1D8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRBV6-1A0A0K0K1D8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV6-1A0A0K0K1D8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-1A0A0K0K1D8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV6-1A0A0K0K1D8 AL121749.1-202ENST00000609313 2153 ntBASIC19.77■□□□□ 0.75
TRBV6-1A0A0K0K1D8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-1A0A0K0K1D8 ZNRF2P1-201ENST00000441407 443 ntBASIC19.76■□□□□ 0.75
TRBV6-1A0A0K0K1D8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.75■□□□□ 0.75
TRBV6-1A0A0K0K1D8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-1A0A0K0K1D8 DYNLL1-208ENST00000550178 581 ntBASIC19.75■□□□□ 0.75
TRBV6-1A0A0K0K1D8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-1A0A0K0K1D8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV6-1A0A0K0K1D8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV6-1A0A0K0K1D8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV6-1A0A0K0K1D8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV6-1A0A0K0K1D8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms