RNA–Protein interactions for RNA: ENST00000371600.7

NPDC1-201, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPDC1, Length 2,187 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-201ENST00000371600 NISCHQ9Y2I1 1504 aa52.71■■■■■ 6.03
NPDC1-201ENST00000371600 CCDC180Q9P1Z9 1646 aa45.27■■■■■ 4.84
NPDC1-201ENST00000371600 ZCCHC6Q5VYS8 1495 aaKnown RBP44.58■■■■■ 4.73
NPDC1-201ENST00000371600 SHROOM4Q9ULL8 1493 aa44.43■■■■■ 4.7
NPDC1-201ENST00000371600 SUPT5HO00267 1087 aaKnown RBP43.58■■■■■ 4.57
NPDC1-201ENST00000371600 DCAF1Q9Y4B6 1507 aa43.45■■■■■ 4.55
NPDC1-201ENST00000371600 DCAF8L2P0C7V8 631 aa43.41■■■■■ 4.54
NPDC1-201ENST00000371600 ABCC9O60706 1549 aa42.5■■■■■ 4.39
NPDC1-201ENST00000371600 CHIC1Q5VXU3 224 aa42.47■■■■■ 4.39
NPDC1-201ENST00000371600 MYO15BQ96JP2 1530 aa42.37■■■■■ 4.37
NPDC1-201ENST00000371600 NACADO15069 1562 aa42.01■■■■■ 4.32
NPDC1-201ENST00000371600 SCRIBQ14160 1630 aa41.97■■■■■ 4.31
NPDC1-201ENST00000371600 RSF1Q96T23 1441 aaPredicted RBP41.6■■■■■ 4.25
NPDC1-201ENST00000371600 RB1CC1Q8TDY2 1594 aa41.52■■■■■ 4.24
NPDC1-201ENST00000371600 LOC105371045A0A1W2PR82 267 aa41.03■■■■■ 4.16
NPDC1-201ENST00000371600 CECR2Q9BXF3 1484 aa40.96■■■■■ 4.15
NPDC1-201ENST00000371600 UNC13AQ9UPW8 1703 aa40.96■■■■■ 4.15
NPDC1-201ENST00000371600 HRCP23327 699 aa40.89■■■■■ 4.14
NPDC1-201ENST00000371600 MROH2BQ7Z745 1585 aa40.86■■■■■ 4.13
NPDC1-201ENST00000371600 PCGF6Q9BYE7 350 aa40.85■■■■■ 4.13
NPDC1-201ENST00000371600 TRIM41Q8WV44 630 aa40.78■■■■■ 4.12
NPDC1-201ENST00000371600 WIZO95785 1651 aa40.58■■■■■ 4.09
NPDC1-201ENST00000371600 BAZ1AQ9NRL2 1556 aaPredicted RBP40.54■■■■■ 4.08
NPDC1-201ENST00000371600 BICRAQ9NZM4 1560 aa40.46■■■■■ 4.07
NPDC1-201ENST00000371600 TRIM26Q12899 539 aaPredicted RBP40.34■■■■■ 4.05
NPDC1-201ENST00000371600 PABPN1Q86U42 306 aaKnown RBP eCLIP40.3■■■■■ 4.048e-6■□□□□ 8.9
NPDC1-201ENST00000371600 FAM9AQ8IZU1 332 aaPredicted RBP40.2■■■■■ 4.03
NPDC1-201ENST00000371600 SMARCA4P51532 1647 aa40.18■■■■■ 4.02
NPDC1-201ENST00000371600 TOP2AP11388 1531 aaKnown RBP40.12■■■■■ 4.01
NPDC1-201ENST00000371600 EIF4G1Q04637 1599 aaKnown RBP40.09■■■■■ 4.01
NPDC1-201ENST00000371600 CCDC88BA6NC98 1476 aa39.87■■■■□ 3.97
NPDC1-201ENST00000371600 SMARCA2P51531 1590 aa39.82■■■■□ 3.97
NPDC1-201ENST00000371600 PPARGC1BQ86YN6 1023 aaKnown RBP39.78■■■■□ 3.96
NPDC1-201ENST00000371600 EHMT2Q96KQ7 1210 aa39.67■■■■□ 3.94
NPDC1-201ENST00000371600 PEG3Q9GZU2 1588 aa39.57■■■■□ 3.92
NPDC1-201ENST00000371600 ABCC8Q09428 1581 aa39.56■■■■□ 3.92
NPDC1-201ENST00000371600 ZEB1P37275 1124 aaPredicted RBP39.52■■■■□ 3.92
NPDC1-201ENST00000371600 ATAD2BQ9ULI0 1458 aa39.36■■■■□ 3.89
NPDC1-201ENST00000371600 EEA1Q15075 1411 aa39.3■■■■□ 3.88
NPDC1-201ENST00000371600 SOGA1O94964 1423 aa39.22■■■■□ 3.87
NPDC1-201ENST00000371600 BAZ1BQ9UIG0 1483 aaKnown RBP39.14■■■■□ 3.86
NPDC1-201ENST00000371600 CSRNP3Q8WYN3 585 aa39.11■■■■□ 3.85
NPDC1-201ENST00000371600 TNIKQ9UKE5 1360 aa39.11■■■■□ 3.85
NPDC1-201ENST00000371600 WRNQ14191 1432 aaPredicted RBP eCLIP39.1■■■■□ 3.85
NPDC1-201ENST00000371600 CEP162Q5TB80 1403 aa39.04■■■■□ 3.84
NPDC1-201ENST00000371600 RUSC2Q8N2Y8 1516 aa38.97■■■■□ 3.83
NPDC1-201ENST00000371600 GOLGA3Q08378 1498 aa38.88■■■■□ 3.81
NPDC1-201ENST00000371600 UBTFP17480 764 aaKnown RBP38.83■■■■□ 3.81
NPDC1-201ENST00000371600 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
NPDC1-201ENST00000371600 SYNJ1O43426 1573 aa38.82■■■■□ 3.81
NPDC1-201ENST00000371600 HMGXB3Q12766 1538 aa38.8■■■■□ 3.8
NPDC1-201ENST00000371600 CEP164Q9UPV0 1460 aa38.71■■■■□ 3.79
NPDC1-201ENST00000371600 KIF21BO75037 1637 aa38.65■■■■□ 3.78
NPDC1-201ENST00000371600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.53■■■■□ 3.76
NPDC1-201ENST00000371600 CCER1Q8TC90 406 aaPredicted RBP38.53■■■■□ 3.76
NPDC1-201ENST00000371600 TOP2BQ02880 1626 aa38.48■■■■□ 3.75
NPDC1-201ENST00000371600 CC2D2AQ9P2K1 1620 aa38.41■■■■□ 3.74
NPDC1-201ENST00000371600 TTBK1Q5TCY1 1321 aaPredicted RBP38.39■■■■□ 3.74
NPDC1-201ENST00000371600 CLIP1P30622 1438 aa38.37■■■■□ 3.73
NPDC1-201ENST00000371600 BIVM-ERCC5R4GMW8 1640 aa38.36■■■■□ 3.73
NPDC1-201ENST00000371600 RAPGEF2Q9Y4G8 1499 aa38.3■■■■□ 3.72
NPDC1-201ENST00000371600 VPS8Q8N3P4 1428 aa38.24■■■■□ 3.71
NPDC1-201ENST00000371600 CFTRP13569 1480 aa38.19■■■■□ 3.7
NPDC1-201ENST00000371600 ERICH3Q5RHP9 1530 aa38.11■■■■□ 3.69
NPDC1-201ENST00000371600 PRXQ9BXM0 1461 aa38.09■■■■□ 3.69
NPDC1-201ENST00000371600 CUX1P39880 1505 aa38.07■■■■□ 3.69
NPDC1-201ENST00000371600 APLP2Q06481 763 aa38.04■■■■□ 3.68
NPDC1-201ENST00000371600 PRDM2Q13029 1718 aa38.01■■■■□ 3.68
NPDC1-201ENST00000371600 KIF27Q86VH2 1401 aa37.96■■■■□ 3.67
NPDC1-201ENST00000371600 CADPSQ9ULU8 1353 aa37.92■■■■□ 3.66
NPDC1-201ENST00000371600 RANGAP1P46060 587 aaPredicted RBP37.83■■■■□ 3.65
NPDC1-201ENST00000371600 HNRNPUL2Q1KMD3 747 aaKnown RBP37.77■■■■□ 3.64
NPDC1-201ENST00000371600 ARAP1Q96P48 1450 aa37.75■■■■□ 3.63
NPDC1-201ENST00000371600 DIEXFQ68CQ4 756 aaKnown RBP37.7■■■■□ 3.63
NPDC1-201ENST00000371600 NESP48681 1621 aa37.58■■■■□ 3.61
NPDC1-201ENST00000371600 DNAJC5BQ9UF47 199 aa37.56■■■■□ 3.6
NPDC1-201ENST00000371600 ZNF316A6NFI3 1004 aaPredicted RBP37.54■■■■□ 3.6
NPDC1-201ENST00000371600 FANCD2Q9BXW9 1451 aa37.54■■■■□ 3.6
NPDC1-201ENST00000371600 CUX2O14529 1486 aa37.53■■■■□ 3.6
NPDC1-201ENST00000371600 IGF1RP08069 1367 aa37.52■■■■□ 3.6
NPDC1-201ENST00000371600 ARHGAP35Q9NRY4 1499 aa37.47■■■■□ 3.59
NPDC1-201ENST00000371600 KANK4Q5T7N3 995 aaPredicted RBP37.44■■■■□ 3.58
NPDC1-201ENST00000371600 FGD5Q6ZNL6 1462 aa37.42■■■■□ 3.58
NPDC1-201ENST00000371600 SCAF1Q9H7N4 1312 aaKnown RBP37.42■■■■□ 3.58
NPDC1-201ENST00000371600 LAMC3Q9Y6N6 1575 aa37.37■■■■□ 3.57
NPDC1-201ENST00000371600 CARMIL1Q5VZK9 1371 aa37.36■■■■□ 3.57
NPDC1-201ENST00000371600 RRBP1Q9P2E9 1410 aaKnown RBP37.36■■■■□ 3.57
NPDC1-201ENST00000371600 CLSPNQ9HAW4 1339 aa37.35■■■■□ 3.57
NPDC1-201ENST00000371600 ACIN1Q9UKV3 1341 aaKnown RBP37.29■■■■□ 3.56
NPDC1-201ENST00000371600 DNMBPQ6XZF7 1577 aa37.28■■■■□ 3.56
NPDC1-201ENST00000371600 TOPBP1Q92547 1522 aa37.23■■■■□ 3.55
NPDC1-201ENST00000371600 CENPBP07199 599 aaPredicted RBP37.2■■■■□ 3.55
NPDC1-201ENST00000371600 MAP3K1Q13233 1512 aa37.19■■■■□ 3.54
NPDC1-201ENST00000371600 DHX57Q6P158 1386 aaKnown RBP37.18■■■■□ 3.54
NPDC1-201ENST00000371600 CCNB3Q8WWL7 1395 aa37.16■■■■□ 3.54
NPDC1-201ENST00000371600 NEUROD1Q13562 356 aa37.14■■■■□ 3.54
NPDC1-201ENST00000371600 POLA1P09884 1462 aaPredicted RBP37.11■■■■□ 3.53
NPDC1-201ENST00000371600 URB2Q14146 1524 aaKnown RBP37.11■■■■□ 3.53
NPDC1-201ENST00000371600 RAD54L2Q9Y4B4 1467 aa37.1■■■■□ 3.53
NPDC1-201ENST00000371600 ABCA10Q8WWZ4 1543 aa37.08■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms