RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 NISCHQ9Y2I1 1504 aa52.7■■■■■ 6.03
SNTB1-202ENST00000517992 CCDC180Q9P1Z9 1646 aa46.28■■■■■ 5
SNTB1-202ENST00000517992 ABCC9O60706 1549 aa44.49■■■■■ 4.71
SNTB1-202ENST00000517992 ZCCHC6Q5VYS8 1495 aaKnown RBP44.32■■■■■ 4.69
SNTB1-202ENST00000517992 SHROOM4Q9ULL8 1493 aa43.96■■■■■ 4.63
SNTB1-202ENST00000517992 DCAF8L2P0C7V8 631 aa43.82■■■■■ 4.6
SNTB1-202ENST00000517992 DCAF1Q9Y4B6 1507 aa43.51■■■■■ 4.56
SNTB1-202ENST00000517992 NACADO15069 1562 aa43.25■■■■■ 4.51
SNTB1-202ENST00000517992 MYO15BQ96JP2 1530 aa43.24■■■■■ 4.51
SNTB1-202ENST00000517992 SUPT5HO00267 1087 aaKnown RBP43.09■■■■■ 4.49
SNTB1-202ENST00000517992 RB1CC1Q8TDY2 1594 aa43.08■■■■■ 4.49
SNTB1-202ENST00000517992 SCRIBQ14160 1630 aa42.54■■■■■ 4.4
SNTB1-202ENST00000517992 UNC13AQ9UPW8 1703 aa42.31■■■■■ 4.36
SNTB1-202ENST00000517992 CHIC1Q5VXU3 224 aa42.13■■■■■ 4.33
SNTB1-202ENST00000517992 BICRAQ9NZM4 1560 aa41.86■■■■■ 4.29
SNTB1-202ENST00000517992 PABPN1Q86U42 306 aaKnown RBP eCLIP41.83■■■■■ 4.29
SNTB1-202ENST00000517992 RSF1Q96T23 1441 aaPredicted RBP41.27■■■■■ 4.2
SNTB1-202ENST00000517992 CECR2Q9BXF3 1484 aa41.07■■■■■ 4.17
SNTB1-202ENST00000517992 HRCP23327 699 aa40.75■■■■■ 4.11
SNTB1-202ENST00000517992 MROH2BQ7Z745 1585 aa40.73■■■■■ 4.11
SNTB1-202ENST00000517992 BAZ1AQ9NRL2 1556 aaPredicted RBP40.73■■■■■ 4.11
SNTB1-202ENST00000517992 SMARCA4P51532 1647 aa40.69■■■■■ 4.1
SNTB1-202ENST00000517992 EIF4G1Q04637 1599 aaKnown RBP40.64■■■■■ 4.1
SNTB1-202ENST00000517992 LOC105371045A0A1W2PR82 267 aa40.6■■■■■ 4.09
SNTB1-202ENST00000517992 PCGF6Q9BYE7 350 aa40.53■■■■■ 4.08
SNTB1-202ENST00000517992 WIZO95785 1651 aa40.39■■■■■ 4.06
SNTB1-202ENST00000517992 TRIM41Q8WV44 630 aa40.35■■■■■ 4.05
SNTB1-202ENST00000517992 CC2D2AQ9P2K1 1620 aa40.24■■■■■ 4.03
SNTB1-202ENST00000517992 ATAD2BQ9ULI0 1458 aa40.18■■■■■ 4.02
SNTB1-202ENST00000517992 PEG3Q9GZU2 1588 aa40.18■■■■■ 4.02
SNTB1-202ENST00000517992 SMARCA2P51531 1590 aa40.11■■■■■ 4.01
SNTB1-202ENST00000517992 TRIM26Q12899 539 aaPredicted RBP40.07■■■■■ 4
SNTB1-202ENST00000517992 DNAJC5BQ9UF47 199 aa39.94■■■■□ 3.98
SNTB1-202ENST00000517992 NCAPD3P42695 1498 aa39.93■■■■□ 3.98
SNTB1-202ENST00000517992 BAZ1BQ9UIG0 1483 aaKnown RBP39.91■■■■□ 3.98
SNTB1-202ENST00000517992 TOP2AP11388 1531 aaKnown RBP39.88■■■■□ 3.98
SNTB1-202ENST00000517992 HMGXB3Q12766 1538 aa39.82■■■■□ 3.96
SNTB1-202ENST00000517992 FAM9AQ8IZU1 332 aaPredicted RBP39.72■■■■□ 3.95
SNTB1-202ENST00000517992 PPARGC1BQ86YN6 1023 aaKnown RBP39.54■■■■□ 3.92
SNTB1-202ENST00000517992 CCDC88BA6NC98 1476 aa39.53■■■■□ 3.92
SNTB1-202ENST00000517992 ZEB1P37275 1124 aaPredicted RBP39.33■■■■□ 3.89
SNTB1-202ENST00000517992 ABCC8Q09428 1581 aa39.28■■■■□ 3.88
SNTB1-202ENST00000517992 EHMT2Q96KQ7 1210 aa39.13■■■■□ 3.85
SNTB1-202ENST00000517992 EEA1Q15075 1411 aa39.08■■■■□ 3.85
SNTB1-202ENST00000517992 WRNQ14191 1432 aaPredicted RBP eCLIP38.95■■■■□ 3.83
SNTB1-202ENST00000517992 SOGA1O94964 1423 aa38.88■■■■□ 3.81
SNTB1-202ENST00000517992 CADPSQ9ULU8 1353 aa38.86■■■■□ 3.81
SNTB1-202ENST00000517992 NESP48681 1621 aa38.86■■■■□ 3.81
SNTB1-202ENST00000517992 CFTRP13569 1480 aa38.86■■■■□ 3.81
SNTB1-202ENST00000517992 TNIKQ9UKE5 1360 aa38.85■■■■□ 3.81
SNTB1-202ENST00000517992 CEP162Q5TB80 1403 aa38.8■■■■□ 3.8
SNTB1-202ENST00000517992 CSRNP3Q8WYN3 585 aa38.71■■■■□ 3.79
SNTB1-202ENST00000517992 LAMC3Q9Y6N6 1575 aa38.7■■■■□ 3.79
SNTB1-202ENST00000517992 PRDM2Q13029 1718 aa38.66■■■■□ 3.78
SNTB1-202ENST00000517992 GOLGA3Q08378 1498 aa38.65■■■■□ 3.78
SNTB1-202ENST00000517992 RUSC2Q8N2Y8 1516 aa38.65■■■■□ 3.78
SNTB1-202ENST00000517992 SYNJ1O43426 1573 aa38.6■■■■□ 3.77
SNTB1-202ENST00000517992 KIF21BO75037 1637 aa38.52■■■■□ 3.76
SNTB1-202ENST00000517992 FANCD2Q9BXW9 1451 aa38.46■■■■□ 3.75
SNTB1-202ENST00000517992 CEP164Q9UPV0 1460 aa38.46■■■■□ 3.75
SNTB1-202ENST00000517992 PDS5BQ9NTI5 1447 aa38.4■■■■□ 3.74
SNTB1-202ENST00000517992 KIF21AQ7Z4S6 1674 aa38.39■■■■□ 3.74
SNTB1-202ENST00000517992 UBTFP17480 764 aaKnown RBP38.37■■■■□ 3.73
SNTB1-202ENST00000517992 TOP2BQ02880 1626 aa38.27■■■■□ 3.72
SNTB1-202ENST00000517992 CCER1Q8TC90 406 aaPredicted RBP38.22■■■■□ 3.71
SNTB1-202ENST00000517992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.21■■■■□ 3.71
SNTB1-202ENST00000517992 BIVM-ERCC5R4GMW8 1640 aa38.2■■■■□ 3.71
SNTB1-202ENST00000517992 ERCC6Q03468 1493 aa38.18■■■■□ 3.7
SNTB1-202ENST00000517992 CUX1P39880 1505 aa38.13■■■■□ 3.69
SNTB1-202ENST00000517992 CLIP1P30622 1438 aa38.09■■■■□ 3.69
SNTB1-202ENST00000517992 URB2Q14146 1524 aaKnown RBP38.05■■■■□ 3.68
SNTB1-202ENST00000517992 RAPGEF2Q9Y4G8 1499 aa38.01■■■■□ 3.68
SNTB1-202ENST00000517992 VPS8Q8N3P4 1428 aa38.01■■■■□ 3.68
SNTB1-202ENST00000517992 MRC2Q9UBG0 1479 aa37.98■■■■□ 3.67
SNTB1-202ENST00000517992 DNMBPQ6XZF7 1577 aa37.97■■■■□ 3.67
SNTB1-202ENST00000517992 TOPBP1Q92547 1522 aa37.97■■■■□ 3.67
SNTB1-202ENST00000517992 ERICH3Q5RHP9 1530 aa37.94■■■■□ 3.66
SNTB1-202ENST00000517992 TTBK1Q5TCY1 1321 aaPredicted RBP37.93■■■■□ 3.66
SNTB1-202ENST00000517992 THOC2Q8NI27 1593 aaKnown RBP37.91■■■■□ 3.66
SNTB1-202ENST00000517992 PRXQ9BXM0 1461 aa37.83■■■■□ 3.65
SNTB1-202ENST00000517992 WDR62O43379 1518 aa37.82■■■■□ 3.65
SNTB1-202ENST00000517992 FGD5Q6ZNL6 1462 aa37.82■■■■□ 3.64
SNTB1-202ENST00000517992 PELP1Q8IZL8 1130 aaKnown RBP37.76■■■■□ 3.64
SNTB1-202ENST00000517992 POLA1P09884 1462 aaPredicted RBP37.74■■■■□ 3.63
SNTB1-202ENST00000517992 RAD54L2Q9Y4B4 1467 aa37.64■■■■□ 3.62
SNTB1-202ENST00000517992 KIF27Q86VH2 1401 aa37.63■■■■□ 3.61
SNTB1-202ENST00000517992 APLP2Q06481 763 aa37.62■■■■□ 3.61
SNTB1-202ENST00000517992 CUX2O14529 1486 aa37.57■■■■□ 3.61
SNTB1-202ENST00000517992 ARAP1Q96P48 1450 aa37.54■■■■□ 3.6
SNTB1-202ENST00000517992 TARBP1Q13395 1621 aaKnown RBP37.48■■■■□ 3.59
SNTB1-202ENST00000517992 DIEXFQ68CQ4 756 aaKnown RBP37.46■■■■□ 3.59
SNTB1-202ENST00000517992 WDR97A6NE52 1622 aa37.43■■■■□ 3.58
SNTB1-202ENST00000517992 ABCA10Q8WWZ4 1543 aa37.42■■■■□ 3.58
SNTB1-202ENST00000517992 HNRNPUL2Q1KMD3 747 aaKnown RBP37.39■■■■□ 3.58
SNTB1-202ENST00000517992 IFT140Q96RY7 1462 aa37.38■■■■□ 3.58
SNTB1-202ENST00000517992 SCAF1Q9H7N4 1312 aaKnown RBP37.33■■■■□ 3.57
SNTB1-202ENST00000517992 TDRD9Q8NDG6 1382 aaKnown RBP37.33■■■■□ 3.57
SNTB1-202ENST00000517992 ZNF316A6NFI3 1004 aaPredicted RBP37.3■■■■□ 3.56
SNTB1-202ENST00000517992 ZNF608Q9ULD9 1512 aaPredicted RBP37.3■■■■□ 3.56
SNTB1-202ENST00000517992 RANGAP1P46060 587 aaPredicted RBP37.3■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms