Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.18■■■□□ 2.26
SHC3Q92529 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SHC3Q92529 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SHC3Q92529 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.14■■■□□ 2.26
SHC3Q92529 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.14■■■□□ 2.26
SHC3Q92529 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SHC3Q92529 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.13■■■□□ 2.25
SHC3Q92529 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
SHC3Q92529 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SHC3Q92529 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.09■■■□□ 2.25
SHC3Q92529 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SHC3Q92529 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SHC3Q92529 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SHC3Q92529 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.06■■■□□ 2.24
SHC3Q92529 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
SHC3Q92529 AL133380.1-201ENST00000506013 324 ntBASIC29.06■■■□□ 2.24
SHC3Q92529 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
SHC3Q92529 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.04■■■□□ 2.24
SHC3Q92529 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.02■■■□□ 2.24
SHC3Q92529 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SHC3Q92529 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SHC3Q92529 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.99■■■□□ 2.23
SHC3Q92529 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SHC3Q92529 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.99■■■□□ 2.23
SHC3Q92529 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
SHC3Q92529 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SHC3Q92529 RARRES2P7-201ENST00000567349 469 ntBASIC28.97■■■□□ 2.23
SHC3Q92529 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.96■■■□□ 2.23
SHC3Q92529 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SHC3Q92529 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.95■■■□□ 2.22
SHC3Q92529 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
SHC3Q92529 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.94■■■□□ 2.22
SHC3Q92529 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SHC3Q92529 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SHC3Q92529 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.93■■■□□ 2.22
SHC3Q92529 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHC3Q92529 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SHC3Q92529 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SHC3Q92529 WASH5P-204ENST00000632292 975 ntBASIC28.92■■■□□ 2.22
SHC3Q92529 AL161658.1-201ENST00000623641 1967 ntBASIC28.91■■■□□ 2.22
SHC3Q92529 SETD8P1-201ENST00000623146 1180 ntBASIC28.89■■■□□ 2.22
SHC3Q92529 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
SHC3Q92529 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SHC3Q92529 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SHC3Q92529 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
SHC3Q92529 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SHC3Q92529 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.87■■■□□ 2.21
SHC3Q92529 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SHC3Q92529 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SHC3Q92529 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SHC3Q92529 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SHC3Q92529 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.82■■■□□ 2.2
SHC3Q92529 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SHC3Q92529 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SHC3Q92529 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SHC3Q92529 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SHC3Q92529 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SHC3Q92529 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SHC3Q92529 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SHC3Q92529 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
SHC3Q92529 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SHC3Q92529 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SHC3Q92529 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.76■■■□□ 2.19
SHC3Q92529 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SHC3Q92529 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SHC3Q92529 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
SHC3Q92529 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
SHC3Q92529 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.73■■■□□ 2.19
SHC3Q92529 ABCB10P1-201ENST00000614297 2181 ntBASIC28.73■■■□□ 2.19
SHC3Q92529 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SHC3Q92529 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.71■■■□□ 2.19
SHC3Q92529 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SHC3Q92529 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
SHC3Q92529 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.7■■■□□ 2.18
SHC3Q92529 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SHC3Q92529 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SHC3Q92529 AC136428.2-201ENST00000563187 214 ntBASIC28.69■■■□□ 2.18
SHC3Q92529 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SHC3Q92529 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
SHC3Q92529 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SHC3Q92529 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SHC3Q92529 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SHC3Q92529 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SHC3Q92529 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
SHC3Q92529 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SHC3Q92529 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
SHC3Q92529 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SHC3Q92529 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.65■■■□□ 2.18
SHC3Q92529 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.64■■■□□ 2.18
SHC3Q92529 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SHC3Q92529 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.64■■■□□ 2.18
SHC3Q92529 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SHC3Q92529 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SHC3Q92529 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.62■■■□□ 2.17
SHC3Q92529 AC097358.2-201ENST00000607541 1159 ntBASIC28.62■■■□□ 2.17
SHC3Q92529 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SHC3Q92529 CAHM-201ENST00000604200 896 ntBASIC28.61■■■□□ 2.17
SHC3Q92529 AL391121.1-201ENST00000607967 1349 ntBASIC28.61■■■□□ 2.17
SHC3Q92529 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.6■■■□□ 2.17
SHC3Q92529 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms