Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PHC3Q8NDX5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PHC3Q8NDX5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PHC3Q8NDX5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.93■■□□□ 1.9
PHC3Q8NDX5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PHC3Q8NDX5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.91■■□□□ 1.9
PHC3Q8NDX5 AC139426.1-201ENST00000568218 2529 ntBASIC26.9■■□□□ 1.9
PHC3Q8NDX5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PHC3Q8NDX5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PHC3Q8NDX5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.88■■□□□ 1.89
PHC3Q8NDX5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PHC3Q8NDX5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
PHC3Q8NDX5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.86■■□□□ 1.89
PHC3Q8NDX5 AC097358.2-201ENST00000607541 1159 ntBASIC26.86■■□□□ 1.89
PHC3Q8NDX5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PHC3Q8NDX5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.85■■□□□ 1.89
PHC3Q8NDX5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PHC3Q8NDX5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PHC3Q8NDX5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PHC3Q8NDX5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PHC3Q8NDX5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PHC3Q8NDX5 AL133380.1-201ENST00000506013 324 ntBASIC26.82■■□□□ 1.88
PHC3Q8NDX5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PHC3Q8NDX5 AC136428.2-201ENST00000563187 214 ntBASIC26.8■■□□□ 1.88
PHC3Q8NDX5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.8■■□□□ 1.88
PHC3Q8NDX5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PHC3Q8NDX5 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.79■■□□□ 1.88
PHC3Q8NDX5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PHC3Q8NDX5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
PHC3Q8NDX5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.78■■□□□ 1.88
PHC3Q8NDX5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PHC3Q8NDX5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.76■■□□□ 1.87
PHC3Q8NDX5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PHC3Q8NDX5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.75■■□□□ 1.87
PHC3Q8NDX5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
PHC3Q8NDX5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.74■■□□□ 1.87
PHC3Q8NDX5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PHC3Q8NDX5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PHC3Q8NDX5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PHC3Q8NDX5 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
PHC3Q8NDX5 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.7■■□□□ 1.86
PHC3Q8NDX5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.7■■□□□ 1.86
PHC3Q8NDX5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PHC3Q8NDX5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
PHC3Q8NDX5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.69■■□□□ 1.86
PHC3Q8NDX5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PHC3Q8NDX5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
PHC3Q8NDX5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PHC3Q8NDX5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PHC3Q8NDX5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PHC3Q8NDX5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PHC3Q8NDX5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
PHC3Q8NDX5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.65■■□□□ 1.86
PHC3Q8NDX5 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PHC3Q8NDX5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PHC3Q8NDX5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
PHC3Q8NDX5 CAHM-201ENST00000604200 896 ntBASIC26.64■■□□□ 1.86
PHC3Q8NDX5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PHC3Q8NDX5 AC120057.4-201ENST00000624722 1615 ntBASIC26.63■■□□□ 1.85
PHC3Q8NDX5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.62■■□□□ 1.85
PHC3Q8NDX5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
PHC3Q8NDX5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.6■■□□□ 1.85
PHC3Q8NDX5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PHC3Q8NDX5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PHC3Q8NDX5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PHC3Q8NDX5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PHC3Q8NDX5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
PHC3Q8NDX5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PHC3Q8NDX5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PHC3Q8NDX5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
PHC3Q8NDX5 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PHC3Q8NDX5 AL391121.1-201ENST00000607967 1349 ntBASIC26.56■■□□□ 1.84
PHC3Q8NDX5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PHC3Q8NDX5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PHC3Q8NDX5 SUZ12P1-203ENST00000578195 985 ntBASIC26.54■■□□□ 1.84
PHC3Q8NDX5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PHC3Q8NDX5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PHC3Q8NDX5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PHC3Q8NDX5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PHC3Q8NDX5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.52■■□□□ 1.84
PHC3Q8NDX5 WASH5P-204ENST00000632292 975 ntBASIC26.52■■□□□ 1.84
PHC3Q8NDX5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PHC3Q8NDX5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PHC3Q8NDX5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PHC3Q8NDX5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PHC3Q8NDX5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PHC3Q8NDX5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PHC3Q8NDX5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PHC3Q8NDX5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PHC3Q8NDX5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.47■■□□□ 1.83
PHC3Q8NDX5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PHC3Q8NDX5 ABCB10P1-201ENST00000614297 2181 ntBASIC26.47■■□□□ 1.83
PHC3Q8NDX5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PHC3Q8NDX5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.45■■□□□ 1.82
PHC3Q8NDX5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.45■■□□□ 1.82
PHC3Q8NDX5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms