Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZC3H3Q8IXZ2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ZC3H3Q8IXZ2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
ZC3H3Q8IXZ2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.77■■■□□ 2.36
ZC3H3Q8IXZ2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.76■■■□□ 2.35
ZC3H3Q8IXZ2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ZC3H3Q8IXZ2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.75■■■□□ 2.35
ZC3H3Q8IXZ2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
ZC3H3Q8IXZ2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.74■■■□□ 2.35
ZC3H3Q8IXZ2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.74■■■□□ 2.35
ZC3H3Q8IXZ2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
ZC3H3Q8IXZ2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
ZC3H3Q8IXZ2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.71■■■□□ 2.35
ZC3H3Q8IXZ2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
ZC3H3Q8IXZ2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.69■■■□□ 2.34
ZC3H3Q8IXZ2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ZC3H3Q8IXZ2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.68■■■□□ 2.34
ZC3H3Q8IXZ2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.67■■■□□ 2.34
ZC3H3Q8IXZ2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.67■■■□□ 2.34
ZC3H3Q8IXZ2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
ZC3H3Q8IXZ2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.66■■■□□ 2.34
ZC3H3Q8IXZ2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.63■■■□□ 2.33
ZC3H3Q8IXZ2 AL133380.1-201ENST00000506013 324 ntBASIC29.63■■■□□ 2.33
ZC3H3Q8IXZ2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.63■■■□□ 2.33
ZC3H3Q8IXZ2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ZC3H3Q8IXZ2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
ZC3H3Q8IXZ2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
ZC3H3Q8IXZ2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
ZC3H3Q8IXZ2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.59■■■□□ 2.33
ZC3H3Q8IXZ2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
ZC3H3Q8IXZ2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
ZC3H3Q8IXZ2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
ZC3H3Q8IXZ2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.55■■■□□ 2.32
ZC3H3Q8IXZ2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
ZC3H3Q8IXZ2 AL161658.1-201ENST00000623641 1967 ntBASIC29.54■■■□□ 2.32
ZC3H3Q8IXZ2 WASH5P-204ENST00000632292 975 ntBASIC29.53■■■□□ 2.32
ZC3H3Q8IXZ2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.5■■■□□ 2.31
ZC3H3Q8IXZ2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
ZC3H3Q8IXZ2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ZC3H3Q8IXZ2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ZC3H3Q8IXZ2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ZC3H3Q8IXZ2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ZC3H3Q8IXZ2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.48■■■□□ 2.31
ZC3H3Q8IXZ2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.46■■■□□ 2.31
ZC3H3Q8IXZ2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H3Q8IXZ2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.46■■■□□ 2.31
ZC3H3Q8IXZ2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H3Q8IXZ2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H3Q8IXZ2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ZC3H3Q8IXZ2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
ZC3H3Q8IXZ2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
ZC3H3Q8IXZ2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
ZC3H3Q8IXZ2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ZC3H3Q8IXZ2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ZC3H3Q8IXZ2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.43■■■□□ 2.3
ZC3H3Q8IXZ2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ZC3H3Q8IXZ2 RARRES2P7-201ENST00000567349 469 ntBASIC29.42■■■□□ 2.3
ZC3H3Q8IXZ2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
ZC3H3Q8IXZ2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ZC3H3Q8IXZ2 ABCB10P1-201ENST00000614297 2181 ntBASIC29.41■■■□□ 2.3
ZC3H3Q8IXZ2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ZC3H3Q8IXZ2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ZC3H3Q8IXZ2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
ZC3H3Q8IXZ2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
ZC3H3Q8IXZ2 SETD8P1-201ENST00000623146 1180 ntBASIC29.38■■■□□ 2.29
ZC3H3Q8IXZ2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ZC3H3Q8IXZ2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
ZC3H3Q8IXZ2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
ZC3H3Q8IXZ2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
ZC3H3Q8IXZ2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
ZC3H3Q8IXZ2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
ZC3H3Q8IXZ2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H3Q8IXZ2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ZC3H3Q8IXZ2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
ZC3H3Q8IXZ2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H3Q8IXZ2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H3Q8IXZ2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H3Q8IXZ2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ZC3H3Q8IXZ2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.3■■■□□ 2.28
ZC3H3Q8IXZ2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ZC3H3Q8IXZ2 ST7-AS1-201ENST00000456775 1889 ntBASIC29.29■■■□□ 2.28
ZC3H3Q8IXZ2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ZC3H3Q8IXZ2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ZC3H3Q8IXZ2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ZC3H3Q8IXZ2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
ZC3H3Q8IXZ2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
ZC3H3Q8IXZ2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ZC3H3Q8IXZ2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ZC3H3Q8IXZ2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
ZC3H3Q8IXZ2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ZC3H3Q8IXZ2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ZC3H3Q8IXZ2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ZC3H3Q8IXZ2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.26■■■□□ 2.27
ZC3H3Q8IXZ2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.25■■■□□ 2.27
ZC3H3Q8IXZ2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
ZC3H3Q8IXZ2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
ZC3H3Q8IXZ2 AL135925.1-201ENST00000605920 1701 ntBASIC29.23■■■□□ 2.27
ZC3H3Q8IXZ2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.23■■■□□ 2.27
ZC3H3Q8IXZ2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.22■■■□□ 2.27
ZC3H3Q8IXZ2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms