Protein–RNA interactions for Protein: O60315

ZEB2, Zinc finger E-box-binding homeobox 2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2O60315 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.84■■■□□ 2.53
ZEB2O60315 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
ZEB2O60315 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
ZEB2O60315 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ZEB2O60315 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
ZEB2O60315 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ZEB2O60315 WASH5P-204ENST00000632292 975 ntBASIC30.77■■■□□ 2.52
ZEB2O60315 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
ZEB2O60315 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ZEB2O60315 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.73■■■□□ 2.51
ZEB2O60315 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ZEB2O60315 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ZEB2O60315 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.71■■■□□ 2.51
ZEB2O60315 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.71■■■□□ 2.51
ZEB2O60315 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
ZEB2O60315 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ZEB2O60315 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.69■■■□□ 2.5
ZEB2O60315 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.69■■■□□ 2.5
ZEB2O60315 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
ZEB2O60315 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
ZEB2O60315 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ZEB2O60315 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.66■■■□□ 2.5
ZEB2O60315 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.66■■■□□ 2.5
ZEB2O60315 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.65■■■□□ 2.5
ZEB2O60315 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
ZEB2O60315 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
ZEB2O60315 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ZEB2O60315 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.62■■■□□ 2.49
ZEB2O60315 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.62■■■□□ 2.49
ZEB2O60315 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ZEB2O60315 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.6■■■□□ 2.49
ZEB2O60315 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZEB2O60315 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.59■■■□□ 2.49
ZEB2O60315 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
ZEB2O60315 HLA-V-202ENST00000446817 847 ntBASIC30.58■■■□□ 2.49
ZEB2O60315 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ZEB2O60315 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ZEB2O60315 ZNRF2P2-203ENST00000454624 420 ntBASIC30.56■■■□□ 2.48
ZEB2O60315 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
ZEB2O60315 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
ZEB2O60315 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ZEB2O60315 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.55■■■□□ 2.48
ZEB2O60315 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
ZEB2O60315 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ZEB2O60315 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ZEB2O60315 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ZEB2O60315 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.52■■■□□ 2.48
ZEB2O60315 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.52■■■□□ 2.48
ZEB2O60315 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
ZEB2O60315 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ZEB2O60315 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ZEB2O60315 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ZEB2O60315 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ZEB2O60315 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ZEB2O60315 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
ZEB2O60315 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ZEB2O60315 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
ZEB2O60315 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZEB2O60315 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.46■■■□□ 2.47
ZEB2O60315 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.45■■■□□ 2.47
ZEB2O60315 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ZEB2O60315 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ZEB2O60315 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ZEB2O60315 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.44■■■□□ 2.46
ZEB2O60315 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ZEB2O60315 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ZEB2O60315 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZEB2O60315 DUX4L29-201ENST00000425409 679 ntBASIC30.42■■■□□ 2.46
ZEB2O60315 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ZEB2O60315 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
ZEB2O60315 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
ZEB2O60315 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.4■■■□□ 2.46
ZEB2O60315 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
ZEB2O60315 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.4■■■□□ 2.46
ZEB2O60315 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZEB2O60315 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
ZEB2O60315 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.39■■■□□ 2.46
ZEB2O60315 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.39■■■□□ 2.46
ZEB2O60315 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.39■■■□□ 2.46
ZEB2O60315 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.38■■■□□ 2.45
ZEB2O60315 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
ZEB2O60315 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
ZEB2O60315 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.35■■■□□ 2.45
ZEB2O60315 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
ZEB2O60315 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ZEB2O60315 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ZEB2O60315 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
ZEB2O60315 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
ZEB2O60315 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
ZEB2O60315 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.32■■■□□ 2.44
ZEB2O60315 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ZEB2O60315 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.31■■■□□ 2.44
ZEB2O60315 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ZEB2O60315 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.3■■■□□ 2.44
ZEB2O60315 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ZEB2O60315 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.29■■■□□ 2.44
ZEB2O60315 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
ZEB2O60315 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ZEB2O60315 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.28■■■□□ 2.44
ZEB2O60315 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms