Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 RPS2P35-201ENST00000443417 897 ntBASIC30.68■■■□□ 2.5
PCDHGC5Q9Y5F6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHGC5Q9Y5F6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHGC5Q9Y5F6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.65■■■□□ 2.5
PCDHGC5Q9Y5F6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.61■■■□□ 2.49
PCDHGC5Q9Y5F6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.6■■■□□ 2.49
PCDHGC5Q9Y5F6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHGC5Q9Y5F6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHGC5Q9Y5F6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.56■■■□□ 2.48
PCDHGC5Q9Y5F6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHGC5Q9Y5F6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHGC5Q9Y5F6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCDHGC5Q9Y5F6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
PCDHGC5Q9Y5F6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCDHGC5Q9Y5F6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCDHGC5Q9Y5F6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.49■■■□□ 2.47
PCDHGC5Q9Y5F6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.48■■■□□ 2.47
PCDHGC5Q9Y5F6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHGC5Q9Y5F6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
PCDHGC5Q9Y5F6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.48■■■□□ 2.47
PCDHGC5Q9Y5F6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.47■■■□□ 2.47
PCDHGC5Q9Y5F6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.47■■■□□ 2.47
PCDHGC5Q9Y5F6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCDHGC5Q9Y5F6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
PCDHGC5Q9Y5F6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCDHGC5Q9Y5F6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PCDHGC5Q9Y5F6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.42■■■□□ 2.46
PCDHGC5Q9Y5F6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PCDHGC5Q9Y5F6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PCDHGC5Q9Y5F6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
PCDHGC5Q9Y5F6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.38■■■□□ 2.45
PCDHGC5Q9Y5F6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.38■■■□□ 2.45
PCDHGC5Q9Y5F6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PCDHGC5Q9Y5F6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.38■■■□□ 2.45
PCDHGC5Q9Y5F6 CAHM-201ENST00000604200 896 ntBASIC30.37■■■□□ 2.45
PCDHGC5Q9Y5F6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PCDHGC5Q9Y5F6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCDHGC5Q9Y5F6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.32■■■□□ 2.44
PCDHGC5Q9Y5F6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCDHGC5Q9Y5F6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
PCDHGC5Q9Y5F6 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
PCDHGC5Q9Y5F6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.3■■■□□ 2.44
PCDHGC5Q9Y5F6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.3■■■□□ 2.44
PCDHGC5Q9Y5F6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHGC5Q9Y5F6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCDHGC5Q9Y5F6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHGC5Q9Y5F6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PCDHGC5Q9Y5F6 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.28■■■□□ 2.44
PCDHGC5Q9Y5F6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.27■■■□□ 2.44
PCDHGC5Q9Y5F6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PCDHGC5Q9Y5F6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PCDHGC5Q9Y5F6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCDHGC5Q9Y5F6 AL162393.1-201ENST00000437852 946 ntBASIC30.23■■■□□ 2.43
PCDHGC5Q9Y5F6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
PCDHGC5Q9Y5F6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
PCDHGC5Q9Y5F6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.21■■■□□ 2.43
PCDHGC5Q9Y5F6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PCDHGC5Q9Y5F6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
PCDHGC5Q9Y5F6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHGC5Q9Y5F6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCDHGC5Q9Y5F6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PCDHGC5Q9Y5F6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCDHGC5Q9Y5F6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCDHGC5Q9Y5F6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCDHGC5Q9Y5F6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCDHGC5Q9Y5F6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCDHGC5Q9Y5F6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHGC5Q9Y5F6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCDHGC5Q9Y5F6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.14■■■□□ 2.42
PCDHGC5Q9Y5F6 AL391121.1-201ENST00000607967 1349 ntBASIC30.14■■■□□ 2.42
PCDHGC5Q9Y5F6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDHGC5Q9Y5F6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
PCDHGC5Q9Y5F6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCDHGC5Q9Y5F6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCDHGC5Q9Y5F6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHGC5Q9Y5F6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDHGC5Q9Y5F6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHGC5Q9Y5F6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDHGC5Q9Y5F6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCDHGC5Q9Y5F6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PCDHGC5Q9Y5F6 AL133380.1-201ENST00000506013 324 ntBASIC30.08■■■□□ 2.41
PCDHGC5Q9Y5F6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
PCDHGC5Q9Y5F6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCDHGC5Q9Y5F6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.06■■■□□ 2.4
PCDHGC5Q9Y5F6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
PCDHGC5Q9Y5F6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCDHGC5Q9Y5F6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.04■■■□□ 2.4
PCDHGC5Q9Y5F6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PCDHGC5Q9Y5F6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.03■■■□□ 2.4
PCDHGC5Q9Y5F6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHGC5Q9Y5F6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.02■■■□□ 2.4
PCDHGC5Q9Y5F6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
PCDHGC5Q9Y5F6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
PCDHGC5Q9Y5F6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30■■■□□ 2.39
PCDHGC5Q9Y5F6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30■■■□□ 2.39
PCDHGC5Q9Y5F6 AP006261.1-201ENST00000584783 668 ntBASIC30■■■□□ 2.39
PCDHGC5Q9Y5F6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PCDHGC5Q9Y5F6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHGC5Q9Y5F6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
PCDHGC5Q9Y5F6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms