Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
AP1S3Q96PC3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
AP1S3Q96PC3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP1S3Q96PC3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP1S3Q96PC3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP1S3Q96PC3 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP1S3Q96PC3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP1S3Q96PC3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP1S3Q96PC3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.78■□□□□ 0.92
AP1S3Q96PC3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
AP1S3Q96PC3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP1S3Q96PC3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
AP1S3Q96PC3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.74■□□□□ 0.91
AP1S3Q96PC3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.73■□□□□ 0.91
AP1S3Q96PC3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP1S3Q96PC3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
AP1S3Q96PC3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S3Q96PC3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
AP1S3Q96PC3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S3Q96PC3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S3Q96PC3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S3Q96PC3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
AP1S3Q96PC3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S3Q96PC3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S3Q96PC3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S3Q96PC3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.67■□□□□ 0.9
AP1S3Q96PC3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S3Q96PC3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S3Q96PC3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S3Q96PC3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
AP1S3Q96PC3 AC139426.1-201ENST00000568218 2529 ntBASIC20.65■□□□□ 0.9
AP1S3Q96PC3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
AP1S3Q96PC3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP1S3Q96PC3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.64■□□□□ 0.9
AP1S3Q96PC3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S3Q96PC3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP1S3Q96PC3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S3Q96PC3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S3Q96PC3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP1S3Q96PC3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S3Q96PC3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP1S3Q96PC3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
AP1S3Q96PC3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S3Q96PC3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S3Q96PC3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
AP1S3Q96PC3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP1S3Q96PC3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP1S3Q96PC3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
AP1S3Q96PC3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP1S3Q96PC3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S3Q96PC3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S3Q96PC3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
AP1S3Q96PC3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AP1S3Q96PC3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S3Q96PC3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP1S3Q96PC3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S3Q96PC3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S3Q96PC3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP1S3Q96PC3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.51■□□□□ 0.87
AP1S3Q96PC3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
AP1S3Q96PC3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
AP1S3Q96PC3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
AP1S3Q96PC3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
AP1S3Q96PC3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
AP1S3Q96PC3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S3Q96PC3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S3Q96PC3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
AP1S3Q96PC3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S3Q96PC3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S3Q96PC3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S3Q96PC3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
AP1S3Q96PC3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.45■□□□□ 0.87
AP1S3Q96PC3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
AP1S3Q96PC3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
AP1S3Q96PC3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S3Q96PC3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
AP1S3Q96PC3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S3Q96PC3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S3Q96PC3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S3Q96PC3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S3Q96PC3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP1S3Q96PC3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.42■□□□□ 0.86
AP1S3Q96PC3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.42■□□□□ 0.86
AP1S3Q96PC3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.4■□□□□ 0.86
AP1S3Q96PC3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP1S3Q96PC3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.39■□□□□ 0.85
AP1S3Q96PC3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S3Q96PC3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S3Q96PC3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP1S3Q96PC3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP1S3Q96PC3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.37■□□□□ 0.85
AP1S3Q96PC3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S3Q96PC3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S3Q96PC3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S3Q96PC3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.36■□□□□ 0.85
AP1S3Q96PC3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP1S3Q96PC3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
AP1S3Q96PC3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S3Q96PC3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP1S3Q96PC3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms