RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
KDM3B-201ENST00000314358 EHMT2Q96KQ7 1210 aa34.26■■■■□ 3.08
KDM3B-201ENST00000314358 SUPT5HO00267 1087 aaKnown RBP34.21■■■■□ 3.07
KDM3B-201ENST00000314358 NISCHQ9Y2I1 1504 aa33.81■■■■□ 3
KDM3B-201ENST00000314358 PELP1Q8IZL8 1130 aaKnown RBP33.52■■■□□ 2.96
KDM3B-201ENST00000314358 SHROOM4Q9ULL8 1493 aa33.35■■■□□ 2.93
KDM3B-201ENST00000314358 TTBK1Q5TCY1 1321 aaPredicted RBP33.09■■■□□ 2.89
KDM3B-201ENST00000314358 APLP2Q06481 763 aa32.76■■■□□ 2.83
KDM3B-201ENST00000314358 ERICH6Q7L0X2 663 aa32.72■■■□□ 2.83
KDM3B-201ENST00000314358 FAM9AQ8IZU1 332 aaPredicted RBP32.62■■■□□ 2.81
KDM3B-201ENST00000314358 PCGF6Q9BYE7 350 aa32.46■■■□□ 2.79
KDM3B-201ENST00000314358 RANGAP1P46060 587 aaPredicted RBP32.43■■■□□ 2.78
KDM3B-201ENST00000314358 CCER1Q8TC90 406 aaPredicted RBP32.06■■■□□ 2.72
KDM3B-201ENST00000314358 CENPBP07199 599 aaPredicted RBP32.03■■■□□ 2.72
KDM3B-201ENST00000314358 ATP1B4Q9UN42 357 aaPredicted RBP32.03■■■□□ 2.72
KDM3B-201ENST00000314358 YTHDC1Q96MU7 727 aaKnown RBP32■■■□□ 2.71
KDM3B-201ENST00000314358 MYT1Q01538 1121 aa31.84■■■□□ 2.69
KDM3B-201ENST00000314358 NEFLP07196 543 aa31.6■■■□□ 2.65
KDM3B-201ENST00000314358 PPARGC1BQ86YN6 1023 aaKnown RBP31.45■■■□□ 2.63
KDM3B-201ENST00000314358 ZEB1P37275 1124 aaPredicted RBP31.33■■■□□ 2.61
KDM3B-201ENST00000314358 UBTFP17480 764 aaKnown RBP31.27■■■□□ 2.6
KDM3B-201ENST00000314358 TRIM41Q8WV44 630 aa31.26■■■□□ 2.59
KDM3B-201ENST00000314358 CNGB1Q14028 1251 aaPredicted RBP31.16■■■□□ 2.58
KDM3B-201ENST00000314358 POLR3GLQ9BT43 218 aa31.15■■■□□ 2.58
KDM3B-201ENST00000314358 DAXXQ9UER7 740 aaPredicted RBP31.05■■■□□ 2.56
KDM3B-201ENST00000314358 ITGAEP38570 1179 aa30.88■■■□□ 2.53
KDM3B-201ENST00000314358 MYT1LQ9UL68 1186 aa30.83■■■□□ 2.53
KDM3B-201ENST00000314358 CHIC1Q5VXU3 224 aa30.78■■■□□ 2.52
KDM3B-201ENST00000314358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.56■■■□□ 2.48
KDM3B-201ENST00000314358 HNRNPUL2Q1KMD3 747 aaKnown RBP30.56■■■□□ 2.48
KDM3B-201ENST00000314358 SLC4A1APQ9BWU0 796 aaKnown RBP30.55■■■□□ 2.48
KDM3B-201ENST00000314358 HRCP23327 699 aa30.39■■■□□ 2.46
KDM3B-201ENST00000314358 ZNF316A6NFI3 1004 aaPredicted RBP30.34■■■□□ 2.45
KDM3B-201ENST00000314358 CLSPNQ9HAW4 1339 aa30.34■■■□□ 2.45
KDM3B-201ENST00000314358 TRIM26Q12899 539 aaPredicted RBP30.31■■■□□ 2.44
KDM3B-201ENST00000314358 RTL5Q5HYW3 569 aaPredicted RBP30.24■■■□□ 2.43
KDM3B-201ENST00000314358 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
KDM3B-201ENST00000314358 BCANQ96GW7 911 aa30.09■■■□□ 2.41
KDM3B-201ENST00000314358 BCL11AQ9H165 835 aa30.04■■■□□ 2.4
KDM3B-201ENST00000314358 DIEXFQ68CQ4 756 aaKnown RBP29.82■■■□□ 2.36
KDM3B-201ENST00000314358 NEUROD1Q13562 356 aa29.72■■■□□ 2.35
KDM3B-201ENST00000314358 SLC24A1O60721 1099 aa29.69■■■□□ 2.34
KDM3B-201ENST00000314358 FAM50AQ14320 339 aaKnown RBP29.68■■■□□ 2.34
KDM3B-201ENST00000314358 TRIM52Q96A61 297 aa29.63■■■□□ 2.33
KDM3B-201ENST00000314358 ZNF326Q5BKZ1 582 aaKnown RBP29.6■■■□□ 2.33
KDM3B-201ENST00000314358 GTF3C3Q9Y5Q9 886 aa29.54■■■□□ 2.32
KDM3B-201ENST00000314358 PABPN1Q86U42 306 aaKnown RBP eCLIP29.51■■■□□ 2.32
KDM3B-201ENST00000314358 ZBTB47Q9UFB7 747 aaPredicted RBP29.48■■■□□ 2.31
KDM3B-201ENST00000314358 ABCC9O60706 1549 aa29.46■■■□□ 2.31
KDM3B-201ENST00000314358 CDK11AQ9UQ88 783 aaPredicted RBP29.41■■■□□ 2.3
KDM3B-201ENST00000314358 CANXP27824 592 aaKnown RBP29.36■■■□□ 2.29
KDM3B-201ENST00000314358 NPM2Q86SE8 214 aaKnown RBP29.31■■■□□ 2.28
KDM3B-201ENST00000314358 ANP32CO43423 234 aa29.26■■■□□ 2.27
KDM3B-201ENST00000314358 FBLN2P98095 1184 aa29.25■■■□□ 2.27
KDM3B-201ENST00000314358 EIF5BO60841 1220 aaKnown RBP29.21■■■□□ 2.27
KDM3B-201ENST00000314358 ARID3CA6NKF2 412 aa29.03■■■□□ 2.24
KDM3B-201ENST00000314358 ANP32AP39687 249 aaKnown RBP28.97■■■□□ 2.23
KDM3B-201ENST00000314358 ARXQ96QS3 562 aa28.89■■■□□ 2.22
KDM3B-201ENST00000314358 NEFMP07197 916 aa28.88■■■□□ 2.21
KDM3B-201ENST00000314358 PLPPR3Q6T4P5 718 aa28.84■■■□□ 2.21
KDM3B-201ENST00000314358 HSP90AA1P07900 732 aaKnown RBP28.79■■■□□ 2.2
KDM3B-201ENST00000314358 P3H3Q8IVL6 736 aa28.77■■■□□ 2.2
KDM3B-201ENST00000314358 SALL2Q9Y467 1007 aaPredicted RBP28.76■■■□□ 2.19
KDM3B-201ENST00000314358 FKBP8Q14318 412 aa28.71■■■□□ 2.19
KDM3B-201ENST00000314358 ANP32BQ92688 251 aaKnown RBP28.71■■■□□ 2.19
KDM3B-201ENST00000314358 NBR1Q14596 966 aa28.71■■■□□ 2.19
KDM3B-201ENST00000314358 ACIN1Q9UKV3 1341 aaKnown RBP28.66■■■□□ 2.18
KDM3B-201ENST00000314358 ZNF777Q9ULD5 760 aaPredicted RBP28.65■■■□□ 2.18
KDM3B-201ENST00000314358 FAM9BQ8IZU0 186 aa28.53■■■□□ 2.16
KDM3B-201ENST00000314358 CHGAP10645 457 aaKnown RBP28.52■■■□□ 2.16
KDM3B-201ENST00000314358 HNRNPUQ00839 825 aaKnown RBP eCLIP28.45■■■□□ 2.14
KDM3B-201ENST00000314358 UPF2Q9HAU5 1272 aaKnown RBP28.41■■■□□ 2.14
KDM3B-201ENST00000314358 IRX6P78412 446 aaPredicted RBP28.35■■■□□ 2.13
KDM3B-201ENST00000314358 SENP3Q9H4L4 574 aaPredicted RBP28.33■■■□□ 2.13
KDM3B-201ENST00000314358 STAG3Q9UJ98 1225 aa28.32■■■□□ 2.12
KDM3B-201ENST00000314358 PLEKHG5O94827 1062 aa28.32■■■□□ 2.12
KDM3B-201ENST00000314358 DDX10Q13206 875 aaKnown RBP28.32■■■□□ 2.12
KDM3B-201ENST00000314358 GLIPR1L2Q4G1C9 344 aa28.29■■■□□ 2.12
KDM3B-201ENST00000314358 ESF1Q9H501 851 aaKnown RBP28.28■■■□□ 2.12
KDM3B-201ENST00000314358 A0A0G2JS52 829 aa28.27■■■□□ 2.12
KDM3B-201ENST00000314358 SCAF1Q9H7N4 1312 aaKnown RBP28.24■■■□□ 2.11
KDM3B-201ENST00000314358 CCDC136Q96JN2 1154 aa28.23■■■□□ 2.11
KDM3B-201ENST00000314358 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
KDM3B-201ENST00000314358 TPRNQ4KMQ1 711 aa28.15■■■□□ 2.1
KDM3B-201ENST00000314358 SENP3-EIF4A1A0A087X0R7 540 aa28.15■■■□□ 2.1
KDM3B-201ENST00000314358 CSRNP3Q8WYN3 585 aa28.15■■■□□ 2.1
KDM3B-201ENST00000314358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.11■■■□□ 2.098e-9■■□□□ 12.6
KDM3B-201ENST00000314358 ZBTB7CA1YPR0 619 aa28.1■■■□□ 2.09
KDM3B-201ENST00000314358 TONSLQ96HA7 1378 aa28.1■■■□□ 2.09
KDM3B-201ENST00000314358 HIRIP3Q9BW71 556 aaPredicted RBP28.09■■■□□ 2.09
KDM3B-201ENST00000314358 TMC1Q8TDI8 760 aa28.08■■■□□ 2.09
KDM3B-201ENST00000314358 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.04■■■□□ 2.08
KDM3B-201ENST00000314358 CDK11BP21127 795 aaKnown RBP28.04■■■□□ 2.08
KDM3B-201ENST00000314358 CHIC2Q9UKJ5 165 aa28.04■■■□□ 2.08
KDM3B-201ENST00000314358 KDM2AQ9Y2K7 1162 aa28.04■■■□□ 2.08
KDM3B-201ENST00000314358 TULP1O00294 542 aaPredicted RBP28.03■■■□□ 2.08
KDM3B-201ENST00000314358 WDR43Q15061 677 aaKnown RBP eCLIP28■■■□□ 2.07
KDM3B-201ENST00000314358 NPM1P06748 294 aaKnown RBP eCLIP27.94■■■□□ 2.06
KDM3B-201ENST00000314358 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
KDM3B-201ENST00000314358 MRS2Q9HD23 443 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms