RNA–Protein interactions for RNA: ENST00000621161.4

RAB11FIP4-211, Transcript of RAB11 family interacting protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP4, Length 8,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-211ENST00000621161 PELP1Q8IZL8 1130 aaKnown RBP33.22■■■□□ 2.91
RAB11FIP4-211ENST00000621161 MYT1Q01538 1121 aa32.28■■■□□ 2.76
RAB11FIP4-211ENST00000621161 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
RAB11FIP4-211ENST00000621161 ERICH6Q7L0X2 663 aa31.74■■■□□ 2.67
RAB11FIP4-211ENST00000621161 CCER1Q8TC90 406 aaPredicted RBP31.54■■■□□ 2.64
RAB11FIP4-211ENST00000621161 NISCHQ9Y2I1 1504 aa30.95■■■□□ 2.55
RAB11FIP4-211ENST00000621161 YTHDC1Q96MU7 727 aaKnown RBP30.94■■■□□ 2.54
RAB11FIP4-211ENST00000621161 TTBK1Q5TCY1 1321 aaPredicted RBP30.84■■■□□ 2.53
RAB11FIP4-211ENST00000621161 APLP2Q06481 763 aa30.63■■■□□ 2.49
RAB11FIP4-211ENST00000621161 CENPBP07199 599 aaPredicted RBP30.58■■■□□ 2.49
RAB11FIP4-211ENST00000621161 SUPT5HO00267 1087 aaKnown RBP30.47■■■□□ 2.47
RAB11FIP4-211ENST00000621161 FAM9AQ8IZU1 332 aaPredicted RBP30.36■■■□□ 2.45
RAB11FIP4-211ENST00000621161 EHMT2Q96KQ7 1210 aa30.31■■■□□ 2.44
RAB11FIP4-211ENST00000621161 NEFLP07196 543 aa30.23■■■□□ 2.43
RAB11FIP4-211ENST00000621161 DAXXQ9UER7 740 aaPredicted RBP30.04■■■□□ 2.4
RAB11FIP4-211ENST00000621161 ZEB1P37275 1124 aaPredicted RBP29.68■■■□□ 2.34
RAB11FIP4-211ENST00000621161 PCGF6Q9BYE7 350 aa29.65■■■□□ 2.34
RAB11FIP4-211ENST00000621161 RTL5Q5HYW3 569 aaPredicted RBP29.24■■■□□ 2.27
RAB11FIP4-211ENST00000621161 SHROOM4Q9ULL8 1493 aa29.2■■■□□ 2.27
RAB11FIP4-211ENST00000621161 ZNF316A6NFI3 1004 aaPredicted RBP29.16■■■□□ 2.26
RAB11FIP4-211ENST00000621161 ATP1B4Q9UN42 357 aaPredicted RBP29.07■■■□□ 2.24
RAB11FIP4-211ENST00000621161 GLIPR1L2Q4G1C9 344 aa28.96■■■□□ 2.23
RAB11FIP4-211ENST00000621161 RANGAP1P46060 587 aaPredicted RBP28.88■■■□□ 2.21
RAB11FIP4-211ENST00000621161 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
RAB11FIP4-211ENST00000621161 POLR3GLQ9BT43 218 aa28.55■■■□□ 2.16
RAB11FIP4-211ENST00000621161 UBTFP17480 764 aaKnown RBP28.4■■■□□ 2.14
RAB11FIP4-211ENST00000621161 MYT1LQ9UL68 1186 aa28.31■■■□□ 2.12
RAB11FIP4-211ENST00000621161 EIF5BO60841 1220 aaKnown RBP28.29■■■□□ 2.12
RAB11FIP4-211ENST00000621161 SLC4A1APQ9BWU0 796 aaKnown RBP28.29■■■□□ 2.12
RAB11FIP4-211ENST00000621161 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
RAB11FIP4-211ENST00000621161 ZBTB47Q9UFB7 747 aaPredicted RBP28.22■■■□□ 2.11
RAB11FIP4-211ENST00000621161 CNGB1Q14028 1251 aaPredicted RBP28.13■■■□□ 2.09
RAB11FIP4-211ENST00000621161 ANP32BQ92688 251 aaKnown RBP28■■■□□ 2.07
RAB11FIP4-211ENST00000621161 CDK11AQ9UQ88 783 aaPredicted RBP27.88■■■□□ 2.05
RAB11FIP4-211ENST00000621161 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
RAB11FIP4-211ENST00000621161 HRCP23327 699 aa27.84■■■□□ 2.05
RAB11FIP4-211ENST00000621161 TRIM26Q12899 539 aaPredicted RBP27.81■■■□□ 2.04
RAB11FIP4-211ENST00000621161 ITGAEP38570 1179 aa27.79■■■□□ 2.04
RAB11FIP4-211ENST00000621161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.78■■■□□ 2.04
RAB11FIP4-211ENST00000621161 HNRNPUL2Q1KMD3 747 aaKnown RBP27.78■■■□□ 2.04
RAB11FIP4-211ENST00000621161 PPARGC1BQ86YN6 1023 aaKnown RBP27.69■■■□□ 2.02
RAB11FIP4-211ENST00000621161 TNNT2P45379 298 aaPredicted RBP27.68■■■□□ 2.02
RAB11FIP4-211ENST00000621161 ANP32AP39687 249 aaKnown RBP27.65■■■□□ 2.02
RAB11FIP4-211ENST00000621161 CANXP27824 592 aaKnown RBP27.62■■■□□ 2.01
RAB11FIP4-211ENST00000621161 SLC24A1O60721 1099 aa27.6■■■□□ 2.01
RAB11FIP4-211ENST00000621161 BCL11AQ9H165 835 aa27.57■■■□□ 2
RAB11FIP4-211ENST00000621161 DIEXFQ68CQ4 756 aaKnown RBP27.52■■■□□ 2
RAB11FIP4-211ENST00000621161 HSP90AA1P07900 732 aaKnown RBP27.49■■□□□ 1.99
RAB11FIP4-211ENST00000621161 BCANQ96GW7 911 aa27.46■■□□□ 1.99
RAB11FIP4-211ENST00000621161 NEFMP07197 916 aa27.43■■□□□ 1.98
RAB11FIP4-211ENST00000621161 CDK11BP21127 795 aaKnown RBP27.42■■□□□ 1.98
RAB11FIP4-211ENST00000621161 ANP32CO43423 234 aa27.27■■□□□ 1.96
RAB11FIP4-211ENST00000621161 UPF2Q9HAU5 1272 aaKnown RBP27.24■■□□□ 1.95
RAB11FIP4-211ENST00000621161 NPM2Q86SE8 214 aaKnown RBP27.2■■□□□ 1.95
RAB11FIP4-211ENST00000621161 GTF3C3Q9Y5Q9 886 aa27.2■■□□□ 1.94
RAB11FIP4-211ENST00000621161 TRIM44Q96DX7 344 aaPredicted RBP27.14■■□□□ 1.94
RAB11FIP4-211ENST00000621161 TRIM52Q96A61 297 aa27■■□□□ 1.91
RAB11FIP4-211ENST00000621161 NCLP19338 710 aaKnown RBP26.95■■□□□ 1.91
RAB11FIP4-211ENST00000621161 FAM50AQ14320 339 aaKnown RBP26.91■■□□□ 1.9
RAB11FIP4-211ENST00000621161 NEUROD1Q13562 356 aa26.89■■□□□ 1.89
RAB11FIP4-211ENST00000621161 ZNF326Q5BKZ1 582 aaKnown RBP26.88■■□□□ 1.89
RAB11FIP4-211ENST00000621161 ARXQ96QS3 562 aa26.86■■□□□ 1.89
RAB11FIP4-211ENST00000621161 NBR1Q14596 966 aa26.76■■□□□ 1.87
RAB11FIP4-211ENST00000621161 ANP32EQ9BTT0 268 aa26.62■■□□□ 1.85
RAB11FIP4-211ENST00000621161 CALRP27797 417 aaKnown RBP26.6■■□□□ 1.85
RAB11FIP4-211ENST00000621161 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.58■■□□□ 1.85
RAB11FIP4-211ENST00000621161 ZRSR1Q15695 479 aaKnown RBP26.55■■□□□ 1.84
RAB11FIP4-211ENST00000621161 DNTTIP2Q5QJE6 756 aaKnown RBP26.53■■□□□ 1.84
RAB11FIP4-211ENST00000621161 GOLGA6L22H0YM25 854 aa26.48■■□□□ 1.83
RAB11FIP4-211ENST00000621161 PTMAP06454 111 aaKnown RBP26.46■■□□□ 1.83
RAB11FIP4-211ENST00000621161 AMER1Q5JTC6 1135 aaPredicted RBP26.46■■□□□ 1.83
RAB11FIP4-211ENST00000621161 FKBP8Q14318 412 aa26.43■■□□□ 1.82
RAB11FIP4-211ENST00000621161 ACIN1Q9UKV3 1341 aaKnown RBP26.43■■□□□ 1.82
RAB11FIP4-211ENST00000621161 MYH16Q9H6N6 1097 aa26.43■■□□□ 1.82
RAB11FIP4-211ENST00000621161 ERICH6BQ5W0A0 696 aa26.42■■□□□ 1.82
RAB11FIP4-211ENST00000621161 BECN1Q14457 450 aa26.41■■□□□ 1.82
RAB11FIP4-211ENST00000621161 CCDC136Q96JN2 1154 aa26.37■■□□□ 1.81
RAB11FIP4-211ENST00000621161 LOC105371045A0A1W2PR82 267 aa26.37■■□□□ 1.81
RAB11FIP4-211ENST00000621161 NAP1L5Q96NT1 182 aaPredicted RBP26.34■■□□□ 1.81
RAB11FIP4-211ENST00000621161 DDRGK1Q96HY6 314 aa26.31■■□□□ 1.8
RAB11FIP4-211ENST00000621161 GOLGA6L6A8MZA4 724 aa26.28■■□□□ 1.8
RAB11FIP4-211ENST00000621161 TULP1O00294 542 aaPredicted RBP26.25■■□□□ 1.79
RAB11FIP4-211ENST00000621161 TNNT3P45378 269 aaPredicted RBP26.24■■□□□ 1.79
RAB11FIP4-211ENST00000621161 CCDC180Q9P1Z9 1646 aa26.23■■□□□ 1.79
RAB11FIP4-211ENST00000621161 HNRNPUQ00839 825 aaKnown RBP eCLIP26.19■■□□□ 1.78
RAB11FIP4-211ENST00000621161 NRDCO43847 1150 aa26.18■■□□□ 1.78
RAB11FIP4-211ENST00000621161 ESF1Q9H501 851 aaKnown RBP26.17■■□□□ 1.78
RAB11FIP4-211ENST00000621161 PTMSP20962 102 aa26.13■■□□□ 1.77
RAB11FIP4-211ENST00000621161 CHAF1AQ13111 956 aaPredicted RBP26.13■■□□□ 1.77
RAB11FIP4-211ENST00000621161 CASC1Q6TDU7 716 aa26.08■■□□□ 1.77
RAB11FIP4-211ENST00000621161 L1TD1Q5T7N2 865 aaKnown RBP26.07■■□□□ 1.76
RAB11FIP4-211ENST00000621161 STAG3Q9UJ98 1225 aa26.07■■□□□ 1.76
RAB11FIP4-211ENST00000621161 FAM9BQ8IZU0 186 aa26.06■■□□□ 1.76
RAB11FIP4-211ENST00000621161 WDR43Q15061 677 aaKnown RBP eCLIP26.05■■□□□ 1.76
RAB11FIP4-211ENST00000621161 SALL2Q9Y467 1007 aaPredicted RBP26.03■■□□□ 1.76
RAB11FIP4-211ENST00000621161 TMC1Q8TDI8 760 aa26.02■■□□□ 1.76
RAB11FIP4-211ENST00000621161 NCBP3Q53F19 620 aaKnown RBP26.02■■□□□ 1.76
RAB11FIP4-211ENST00000621161 A0A0G2JS52 829 aa25.98■■□□□ 1.75
RAB11FIP4-211ENST00000621161 PLCB2Q00722 1185 aa25.94■■□□□ 1.74
RAB11FIP4-211ENST00000621161 TPRNQ4KMQ1 711 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms