Protein–RNA interactions for Protein: Q8IYM9

TRIM22, E3 ubiquitin-protein ligase TRIM22, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM22Q8IYM9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
TRIM22Q8IYM9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
TRIM22Q8IYM9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
TRIM22Q8IYM9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.33■■■□□ 2.77
TRIM22Q8IYM9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
TRIM22Q8IYM9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
TRIM22Q8IYM9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
TRIM22Q8IYM9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.25■■■□□ 2.75
TRIM22Q8IYM9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.23■■■□□ 2.75
TRIM22Q8IYM9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.23■■■□□ 2.75
TRIM22Q8IYM9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
TRIM22Q8IYM9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.22■■■□□ 2.75
TRIM22Q8IYM9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
TRIM22Q8IYM9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
TRIM22Q8IYM9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.2■■■□□ 2.75
TRIM22Q8IYM9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
TRIM22Q8IYM9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
TRIM22Q8IYM9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.18■■■□□ 2.74
TRIM22Q8IYM9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.18■■■□□ 2.74
TRIM22Q8IYM9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.17■■■□□ 2.74
TRIM22Q8IYM9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
TRIM22Q8IYM9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
TRIM22Q8IYM9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
TRIM22Q8IYM9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.14■■■□□ 2.73
TRIM22Q8IYM9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TRIM22Q8IYM9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.12■■■□□ 2.73
TRIM22Q8IYM9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.11■■■□□ 2.73
TRIM22Q8IYM9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
TRIM22Q8IYM9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TRIM22Q8IYM9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.08■■■□□ 2.73
TRIM22Q8IYM9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
TRIM22Q8IYM9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
TRIM22Q8IYM9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.03■■■□□ 2.72
TRIM22Q8IYM9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.01■■■□□ 2.71
TRIM22Q8IYM9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
TRIM22Q8IYM9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
TRIM22Q8IYM9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32■■■□□ 2.71
TRIM22Q8IYM9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM22Q8IYM9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.97■■■□□ 2.71
TRIM22Q8IYM9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
TRIM22Q8IYM9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM22Q8IYM9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.95■■■□□ 2.71
TRIM22Q8IYM9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.95■■■□□ 2.71
TRIM22Q8IYM9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.95■■■□□ 2.71
TRIM22Q8IYM9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
TRIM22Q8IYM9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.95■■■□□ 2.7
TRIM22Q8IYM9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
TRIM22Q8IYM9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
TRIM22Q8IYM9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.93■■■□□ 2.7
TRIM22Q8IYM9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM22Q8IYM9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM22Q8IYM9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM22Q8IYM9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
TRIM22Q8IYM9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.91■■■□□ 2.7
TRIM22Q8IYM9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM22Q8IYM9 AC120057.4-201ENST00000624722 1615 ntBASIC31.9■■■□□ 2.7
TRIM22Q8IYM9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
TRIM22Q8IYM9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM22Q8IYM9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM22Q8IYM9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.89■■■□□ 2.69
TRIM22Q8IYM9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.87■■■□□ 2.69
TRIM22Q8IYM9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM22Q8IYM9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM22Q8IYM9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM22Q8IYM9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM22Q8IYM9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM22Q8IYM9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM22Q8IYM9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRIM22Q8IYM9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM22Q8IYM9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.79■■■□□ 2.68
TRIM22Q8IYM9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM22Q8IYM9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM22Q8IYM9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TRIM22Q8IYM9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
TRIM22Q8IYM9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRIM22Q8IYM9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
TRIM22Q8IYM9 RARRES2P7-201ENST00000567349 469 ntBASIC31.73■■■□□ 2.67
TRIM22Q8IYM9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
TRIM22Q8IYM9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
TRIM22Q8IYM9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
TRIM22Q8IYM9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.69■■■□□ 2.66
TRIM22Q8IYM9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TRIM22Q8IYM9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM22Q8IYM9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM22Q8IYM9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM22Q8IYM9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TRIM22Q8IYM9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.63■■■□□ 2.65
TRIM22Q8IYM9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.63■■■□□ 2.65
TRIM22Q8IYM9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.62■■■□□ 2.65
TRIM22Q8IYM9 AL133380.1-201ENST00000506013 324 ntBASIC31.61■■■□□ 2.65
TRIM22Q8IYM9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.6■■■□□ 2.65
TRIM22Q8IYM9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.58■■■□□ 2.65
TRIM22Q8IYM9 SETD8P1-201ENST00000623146 1180 ntBASIC31.58■■■□□ 2.65
TRIM22Q8IYM9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.57■■■□□ 2.64
TRIM22Q8IYM9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM22Q8IYM9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM22Q8IYM9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM22Q8IYM9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM22Q8IYM9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM22Q8IYM9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms