Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ZC3HC1Q86WB0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
ZC3HC1Q86WB0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ZC3HC1Q86WB0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.76■■■□□ 2.03
ZC3HC1Q86WB0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ZC3HC1Q86WB0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
ZC3HC1Q86WB0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.72■■■□□ 2.03
ZC3HC1Q86WB0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.72■■■□□ 2.03
ZC3HC1Q86WB0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.72■■■□□ 2.03
ZC3HC1Q86WB0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
ZC3HC1Q86WB0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ZC3HC1Q86WB0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
ZC3HC1Q86WB0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
ZC3HC1Q86WB0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
ZC3HC1Q86WB0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.69■■■□□ 2.02
ZC3HC1Q86WB0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ZC3HC1Q86WB0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ZC3HC1Q86WB0 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.66■■■□□ 2.02
ZC3HC1Q86WB0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ZC3HC1Q86WB0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ZC3HC1Q86WB0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
ZC3HC1Q86WB0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.64■■■□□ 2.01
ZC3HC1Q86WB0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.64■■■□□ 2.01
ZC3HC1Q86WB0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.63■■■□□ 2.01
ZC3HC1Q86WB0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
ZC3HC1Q86WB0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
ZC3HC1Q86WB0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
ZC3HC1Q86WB0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
ZC3HC1Q86WB0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.6■■■□□ 2.01
ZC3HC1Q86WB0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
ZC3HC1Q86WB0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
ZC3HC1Q86WB0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
ZC3HC1Q86WB0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
ZC3HC1Q86WB0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.57■■■□□ 2
ZC3HC1Q86WB0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.57■■■□□ 2
ZC3HC1Q86WB0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.57■■■□□ 2
ZC3HC1Q86WB0 AC120057.4-201ENST00000624722 1615 ntBASIC27.56■■■□□ 2
ZC3HC1Q86WB0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.54■■■□□ 2
ZC3HC1Q86WB0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ZC3HC1Q86WB0 DYNLL1-208ENST00000550178 581 ntBASIC27.54■■■□□ 2
ZC3HC1Q86WB0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
ZC3HC1Q86WB0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.53■■■□□ 2
ZC3HC1Q86WB0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.52■■■□□ 2
ZC3HC1Q86WB0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.5■■□□□ 1.99
ZC3HC1Q86WB0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3HC1Q86WB0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
ZC3HC1Q86WB0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
ZC3HC1Q86WB0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3HC1Q86WB0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.44■■□□□ 1.98
ZC3HC1Q86WB0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.44■■□□□ 1.98
ZC3HC1Q86WB0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
ZC3HC1Q86WB0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ZC3HC1Q86WB0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
ZC3HC1Q86WB0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ZC3HC1Q86WB0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.42■■□□□ 1.98
ZC3HC1Q86WB0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZC3HC1Q86WB0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZC3HC1Q86WB0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.42■■□□□ 1.98
ZC3HC1Q86WB0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.42■■□□□ 1.98
ZC3HC1Q86WB0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3HC1Q86WB0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ZC3HC1Q86WB0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.37■■□□□ 1.97
ZC3HC1Q86WB0 AL031258.1-201ENST00000623562 325 ntBASIC27.37■■□□□ 1.97
ZC3HC1Q86WB0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZC3HC1Q86WB0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.35■■□□□ 1.97
ZC3HC1Q86WB0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZC3HC1Q86WB0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.34■■□□□ 1.97
ZC3HC1Q86WB0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3HC1Q86WB0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3HC1Q86WB0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZC3HC1Q86WB0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.32■■□□□ 1.96
ZC3HC1Q86WB0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
ZC3HC1Q86WB0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
ZC3HC1Q86WB0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
ZC3HC1Q86WB0 AP002365.1-201ENST00000603448 772 ntBASIC27.29■■□□□ 1.96
ZC3HC1Q86WB0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZC3HC1Q86WB0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ZC3HC1Q86WB0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3HC1Q86WB0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZC3HC1Q86WB0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3HC1Q86WB0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ZC3HC1Q86WB0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ZC3HC1Q86WB0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
ZC3HC1Q86WB0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.21■■□□□ 1.95
ZC3HC1Q86WB0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZC3HC1Q86WB0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
ZC3HC1Q86WB0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
ZC3HC1Q86WB0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ZC3HC1Q86WB0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ZC3HC1Q86WB0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZC3HC1Q86WB0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZC3HC1Q86WB0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
ZC3HC1Q86WB0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.16■■□□□ 1.94
ZC3HC1Q86WB0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3HC1Q86WB0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
ZC3HC1Q86WB0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.14■■□□□ 1.94
ZC3HC1Q86WB0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.1■■□□□ 1.93
ZC3HC1Q86WB0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.09■■□□□ 1.93
ZC3HC1Q86WB0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZC3HC1Q86WB0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 266.9 ms