Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.82■■□□□ 1.72
HLA-DQA1Q5Y7H0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
HLA-DQA1Q5Y7H0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.8■■□□□ 1.72
HLA-DQA1Q5Y7H0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HLA-DQA1Q5Y7H0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
HLA-DQA1Q5Y7H0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HLA-DQA1Q5Y7H0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.77■■□□□ 1.72
HLA-DQA1Q5Y7H0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
HLA-DQA1Q5Y7H0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HLA-DQA1Q5Y7H0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.75■■□□□ 1.71
HLA-DQA1Q5Y7H0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.73■■□□□ 1.71
HLA-DQA1Q5Y7H0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
HLA-DQA1Q5Y7H0 RARRES2P7-201ENST00000567349 469 ntBASIC25.73■■□□□ 1.71
HLA-DQA1Q5Y7H0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
HLA-DQA1Q5Y7H0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HLA-DQA1Q5Y7H0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
HLA-DQA1Q5Y7H0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
HLA-DQA1Q5Y7H0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.7■■□□□ 1.7
HLA-DQA1Q5Y7H0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
HLA-DQA1Q5Y7H0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.69■■□□□ 1.7
HLA-DQA1Q5Y7H0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HLA-DQA1Q5Y7H0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.67■■□□□ 1.7
HLA-DQA1Q5Y7H0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.66■■□□□ 1.7
HLA-DQA1Q5Y7H0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
HLA-DQA1Q5Y7H0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HLA-DQA1Q5Y7H0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
HLA-DQA1Q5Y7H0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
HLA-DQA1Q5Y7H0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
HLA-DQA1Q5Y7H0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.64■■□□□ 1.7
HLA-DQA1Q5Y7H0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
HLA-DQA1Q5Y7H0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.64■■□□□ 1.69
HLA-DQA1Q5Y7H0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HLA-DQA1Q5Y7H0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.63■■□□□ 1.69
HLA-DQA1Q5Y7H0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
HLA-DQA1Q5Y7H0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.61■■□□□ 1.69
HLA-DQA1Q5Y7H0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HLA-DQA1Q5Y7H0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HLA-DQA1Q5Y7H0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
HLA-DQA1Q5Y7H0 SETD8P1-201ENST00000623146 1180 ntBASIC25.56■■□□□ 1.68
HLA-DQA1Q5Y7H0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
HLA-DQA1Q5Y7H0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HLA-DQA1Q5Y7H0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HLA-DQA1Q5Y7H0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.55■■□□□ 1.68
HLA-DQA1Q5Y7H0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HLA-DQA1Q5Y7H0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HLA-DQA1Q5Y7H0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HLA-DQA1Q5Y7H0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.52■■□□□ 1.68
HLA-DQA1Q5Y7H0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HLA-DQA1Q5Y7H0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HLA-DQA1Q5Y7H0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
HLA-DQA1Q5Y7H0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
HLA-DQA1Q5Y7H0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HLA-DQA1Q5Y7H0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
HLA-DQA1Q5Y7H0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
HLA-DQA1Q5Y7H0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
HLA-DQA1Q5Y7H0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HLA-DQA1Q5Y7H0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HLA-DQA1Q5Y7H0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.46■■□□□ 1.67
HLA-DQA1Q5Y7H0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HLA-DQA1Q5Y7H0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HLA-DQA1Q5Y7H0 AL133380.1-201ENST00000506013 324 ntBASIC25.42■■□□□ 1.66
HLA-DQA1Q5Y7H0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
HLA-DQA1Q5Y7H0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HLA-DQA1Q5Y7H0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.4■■□□□ 1.66
HLA-DQA1Q5Y7H0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
HLA-DQA1Q5Y7H0 AC097358.2-201ENST00000607541 1159 ntBASIC25.4■■□□□ 1.66
HLA-DQA1Q5Y7H0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.39■■□□□ 1.66
HLA-DQA1Q5Y7H0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HLA-DQA1Q5Y7H0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
HLA-DQA1Q5Y7H0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.37■■□□□ 1.65
HLA-DQA1Q5Y7H0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
HLA-DQA1Q5Y7H0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HLA-DQA1Q5Y7H0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HLA-DQA1Q5Y7H0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
HLA-DQA1Q5Y7H0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
HLA-DQA1Q5Y7H0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
HLA-DQA1Q5Y7H0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.33■■□□□ 1.65
HLA-DQA1Q5Y7H0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
HLA-DQA1Q5Y7H0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.33■■□□□ 1.65
HLA-DQA1Q5Y7H0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
HLA-DQA1Q5Y7H0 AC120057.4-201ENST00000624722 1615 ntBASIC25.32■■□□□ 1.64
HLA-DQA1Q5Y7H0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HLA-DQA1Q5Y7H0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HLA-DQA1Q5Y7H0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HLA-DQA1Q5Y7H0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HLA-DQA1Q5Y7H0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.31■■□□□ 1.64
HLA-DQA1Q5Y7H0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HLA-DQA1Q5Y7H0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.3■■□□□ 1.64
HLA-DQA1Q5Y7H0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.29■■□□□ 1.64
HLA-DQA1Q5Y7H0 AC136428.2-201ENST00000563187 214 ntBASIC25.29■■□□□ 1.64
HLA-DQA1Q5Y7H0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
HLA-DQA1Q5Y7H0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
HLA-DQA1Q5Y7H0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.28■■□□□ 1.64
HLA-DQA1Q5Y7H0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
HLA-DQA1Q5Y7H0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
HLA-DQA1Q5Y7H0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.26■■□□□ 1.64
HLA-DQA1Q5Y7H0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HLA-DQA1Q5Y7H0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.26■■□□□ 1.63
HLA-DQA1Q5Y7H0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
HLA-DQA1Q5Y7H0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms