Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TBC1D28Q2M2D7 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TBC1D28Q2M2D7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.12■■□□□ 1.45
TBC1D28Q2M2D7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
TBC1D28Q2M2D7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.11■■□□□ 1.45
TBC1D28Q2M2D7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TBC1D28Q2M2D7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TBC1D28Q2M2D7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
TBC1D28Q2M2D7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.09■■□□□ 1.45
TBC1D28Q2M2D7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.09■■□□□ 1.45
TBC1D28Q2M2D7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TBC1D28Q2M2D7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.07■■□□□ 1.44
TBC1D28Q2M2D7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.06■■□□□ 1.44
TBC1D28Q2M2D7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TBC1D28Q2M2D7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.05■■□□□ 1.44
TBC1D28Q2M2D7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TBC1D28Q2M2D7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
TBC1D28Q2M2D7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.03■■□□□ 1.44
TBC1D28Q2M2D7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
TBC1D28Q2M2D7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.03■■□□□ 1.44
TBC1D28Q2M2D7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
TBC1D28Q2M2D7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D28Q2M2D7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
TBC1D28Q2M2D7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D28Q2M2D7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24■■□□□ 1.43
TBC1D28Q2M2D7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24■■□□□ 1.43
TBC1D28Q2M2D7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TBC1D28Q2M2D7 RARRES2P7-201ENST00000567349 469 ntBASIC23.99■■□□□ 1.43
TBC1D28Q2M2D7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D28Q2M2D7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.96■■□□□ 1.43
TBC1D28Q2M2D7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC23.95■■□□□ 1.43
TBC1D28Q2M2D7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D28Q2M2D7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.94■■□□□ 1.42
TBC1D28Q2M2D7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.93■■□□□ 1.42
TBC1D28Q2M2D7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TBC1D28Q2M2D7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TBC1D28Q2M2D7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D28Q2M2D7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D28Q2M2D7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D28Q2M2D7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D28Q2M2D7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D28Q2M2D7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D28Q2M2D7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D28Q2M2D7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D28Q2M2D7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D28Q2M2D7 SETD8P1-201ENST00000623146 1180 ntBASIC23.84■■□□□ 1.41
TBC1D28Q2M2D7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.82■■□□□ 1.4
TBC1D28Q2M2D7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D28Q2M2D7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D28Q2M2D7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TBC1D28Q2M2D7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TBC1D28Q2M2D7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.79■■□□□ 1.4
TBC1D28Q2M2D7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.78■■□□□ 1.4
TBC1D28Q2M2D7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TBC1D28Q2M2D7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.78■■□□□ 1.4
TBC1D28Q2M2D7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TBC1D28Q2M2D7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.76■■□□□ 1.39
TBC1D28Q2M2D7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TBC1D28Q2M2D7 AL133380.1-201ENST00000506013 324 ntBASIC23.75■■□□□ 1.39
TBC1D28Q2M2D7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D28Q2M2D7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TBC1D28Q2M2D7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TBC1D28Q2M2D7 AC120057.4-201ENST00000624722 1615 ntBASIC23.73■■□□□ 1.39
TBC1D28Q2M2D7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D28Q2M2D7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TBC1D28Q2M2D7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TBC1D28Q2M2D7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.71■■□□□ 1.39
TBC1D28Q2M2D7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
TBC1D28Q2M2D7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TBC1D28Q2M2D7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TBC1D28Q2M2D7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.69■■□□□ 1.38
TBC1D28Q2M2D7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.68■■□□□ 1.38
TBC1D28Q2M2D7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D28Q2M2D7 AC097358.2-201ENST00000607541 1159 ntBASIC23.68■■□□□ 1.38
TBC1D28Q2M2D7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TBC1D28Q2M2D7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TBC1D28Q2M2D7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TBC1D28Q2M2D7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TBC1D28Q2M2D7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TBC1D28Q2M2D7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TBC1D28Q2M2D7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TBC1D28Q2M2D7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
TBC1D28Q2M2D7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
TBC1D28Q2M2D7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TBC1D28Q2M2D7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.64■■□□□ 1.37
TBC1D28Q2M2D7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TBC1D28Q2M2D7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D28Q2M2D7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D28Q2M2D7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D28Q2M2D7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TBC1D28Q2M2D7 AC136428.2-201ENST00000563187 214 ntBASIC23.62■■□□□ 1.37
TBC1D28Q2M2D7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TBC1D28Q2M2D7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.61■■□□□ 1.37
TBC1D28Q2M2D7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.61■■□□□ 1.37
TBC1D28Q2M2D7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TBC1D28Q2M2D7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TBC1D28Q2M2D7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TBC1D28Q2M2D7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.59■■□□□ 1.37
TBC1D28Q2M2D7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TBC1D28Q2M2D7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms