Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BCKDHAP12694 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BCKDHAP12694 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.61■■□□□ 1.85
BCKDHAP12694 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
BCKDHAP12694 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
BCKDHAP12694 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.59■■□□□ 1.85
BCKDHAP12694 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.59■■□□□ 1.85
BCKDHAP12694 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.58■■□□□ 1.85
BCKDHAP12694 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BCKDHAP12694 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BCKDHAP12694 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BCKDHAP12694 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
BCKDHAP12694 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
BCKDHAP12694 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
BCKDHAP12694 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.55■■□□□ 1.84
BCKDHAP12694 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
BCKDHAP12694 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BCKDHAP12694 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
BCKDHAP12694 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
BCKDHAP12694 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
BCKDHAP12694 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.53■■□□□ 1.84
BCKDHAP12694 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BCKDHAP12694 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BCKDHAP12694 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BCKDHAP12694 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
BCKDHAP12694 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.51■■□□□ 1.83
BCKDHAP12694 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
BCKDHAP12694 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
BCKDHAP12694 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.49■■□□□ 1.83
BCKDHAP12694 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
BCKDHAP12694 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
BCKDHAP12694 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BCKDHAP12694 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.47■■□□□ 1.83
BCKDHAP12694 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.47■■□□□ 1.83
BCKDHAP12694 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BCKDHAP12694 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
BCKDHAP12694 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
BCKDHAP12694 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
BCKDHAP12694 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.43■■□□□ 1.82
BCKDHAP12694 AC120057.4-201ENST00000624722 1615 ntBASIC26.43■■□□□ 1.82
BCKDHAP12694 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
BCKDHAP12694 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.4■■□□□ 1.82
BCKDHAP12694 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.4■■□□□ 1.82
BCKDHAP12694 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
BCKDHAP12694 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
BCKDHAP12694 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
BCKDHAP12694 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
BCKDHAP12694 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
BCKDHAP12694 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
BCKDHAP12694 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.35■■□□□ 1.81
BCKDHAP12694 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
BCKDHAP12694 DYNLL1-208ENST00000550178 581 ntBASIC26.35■■□□□ 1.81
BCKDHAP12694 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.33■■□□□ 1.81
BCKDHAP12694 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BCKDHAP12694 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.3■■□□□ 1.8
BCKDHAP12694 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.3■■□□□ 1.8
BCKDHAP12694 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
BCKDHAP12694 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
BCKDHAP12694 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.26■■□□□ 1.79
BCKDHAP12694 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
BCKDHAP12694 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
BCKDHAP12694 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
BCKDHAP12694 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
BCKDHAP12694 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
BCKDHAP12694 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
BCKDHAP12694 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
BCKDHAP12694 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
BCKDHAP12694 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
BCKDHAP12694 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.19■■□□□ 1.78
BCKDHAP12694 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.19■■□□□ 1.78
BCKDHAP12694 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.18■■□□□ 1.78
BCKDHAP12694 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
BCKDHAP12694 AL031258.1-201ENST00000623562 325 ntBASIC26.17■■□□□ 1.78
BCKDHAP12694 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
BCKDHAP12694 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
BCKDHAP12694 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
BCKDHAP12694 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.14■■□□□ 1.78
BCKDHAP12694 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
BCKDHAP12694 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
BCKDHAP12694 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.12■■□□□ 1.77
BCKDHAP12694 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
BCKDHAP12694 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
BCKDHAP12694 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.11■■□□□ 1.77
BCKDHAP12694 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.1■■□□□ 1.77
BCKDHAP12694 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
BCKDHAP12694 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
BCKDHAP12694 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
BCKDHAP12694 AP002365.1-201ENST00000603448 772 ntBASIC26.08■■□□□ 1.77
BCKDHAP12694 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
BCKDHAP12694 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BCKDHAP12694 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
BCKDHAP12694 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
BCKDHAP12694 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
BCKDHAP12694 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
BCKDHAP12694 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
BCKDHAP12694 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.03■■□□□ 1.76
BCKDHAP12694 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
BCKDHAP12694 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
BCKDHAP12694 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
BCKDHAP12694 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms