Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.85■■□□□ 1.89
SNRNP200O75643 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.84■■□□□ 1.89
SNRNP200O75643 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNRNP200O75643 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.83■■□□□ 1.89
SNRNP200O75643 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.82■■□□□ 1.88
SNRNP200O75643 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRNP200O75643 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
SNRNP200O75643 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRNP200O75643 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.8■■□□□ 1.88
SNRNP200O75643 AC136428.2-201ENST00000563187 214 ntBASIC26.78■■□□□ 1.88
SNRNP200O75643 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.77■■□□□ 1.88
SNRNP200O75643 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNRNP200O75643 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNRNP200O75643 SETD8P1-201ENST00000623146 1180 ntBASIC26.75■■□□□ 1.87
SNRNP200O75643 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
SNRNP200O75643 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.74■■□□□ 1.87
SNRNP200O75643 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.74■■□□□ 1.87
SNRNP200O75643 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
SNRNP200O75643 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNRNP200O75643 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRNP200O75643 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNRNP200O75643 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SNRNP200O75643 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.69■■□□□ 1.86
SNRNP200O75643 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRNP200O75643 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC26.69■■□□□ 1.86
SNRNP200O75643 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNRNP200O75643 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
SNRNP200O75643 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNRNP200O75643 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNRNP200O75643 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNRNP200O75643 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.65■■□□□ 1.86
SNRNP200O75643 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.65■■□□□ 1.86
SNRNP200O75643 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNRNP200O75643 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SNRNP200O75643 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNRNP200O75643 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
SNRNP200O75643 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNRNP200O75643 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
SNRNP200O75643 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
SNRNP200O75643 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SNRNP200O75643 AL133380.1-201ENST00000506013 324 ntBASIC26.59■■□□□ 1.85
SNRNP200O75643 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP200O75643 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP200O75643 AC097358.2-201ENST00000607541 1159 ntBASIC26.56■■□□□ 1.84
SNRNP200O75643 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.55■■□□□ 1.84
SNRNP200O75643 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNRNP200O75643 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.54■■□□□ 1.84
SNRNP200O75643 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SNRNP200O75643 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.53■■□□□ 1.84
SNRNP200O75643 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.52■■□□□ 1.84
SNRNP200O75643 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.51■■□□□ 1.83
SNRNP200O75643 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SNRNP200O75643 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNRNP200O75643 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNRNP200O75643 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.49■■□□□ 1.83
SNRNP200O75643 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP200O75643 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP200O75643 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.47■■□□□ 1.83
SNRNP200O75643 SUZ12P1-203ENST00000578195 985 ntBASIC26.47■■□□□ 1.83
SNRNP200O75643 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNRNP200O75643 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.47■■□□□ 1.83
SNRNP200O75643 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRNP200O75643 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRNP200O75643 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SNRNP200O75643 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SNRNP200O75643 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SNRNP200O75643 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.44■■□□□ 1.82
SNRNP200O75643 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.43■■□□□ 1.82
SNRNP200O75643 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNRNP200O75643 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SNRNP200O75643 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
SNRNP200O75643 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNRNP200O75643 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNRNP200O75643 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SNRNP200O75643 AL391121.1-201ENST00000607967 1349 ntBASIC26.37■■□□□ 1.81
SNRNP200O75643 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.37■■□□□ 1.81
SNRNP200O75643 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNRNP200O75643 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNRNP200O75643 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNRNP200O75643 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
SNRNP200O75643 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNRNP200O75643 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.3■■□□□ 1.8
SNRNP200O75643 AC120057.4-201ENST00000624722 1615 ntBASIC26.29■■□□□ 1.8
SNRNP200O75643 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNRNP200O75643 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRNP200O75643 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNRNP200O75643 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
SNRNP200O75643 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.26■■□□□ 1.79
SNRNP200O75643 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
SNRNP200O75643 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP200O75643 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SNRNP200O75643 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.25■■□□□ 1.79
SNRNP200O75643 CAHM-201ENST00000604200 896 ntBASIC26.24■■□□□ 1.79
SNRNP200O75643 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNRNP200O75643 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.24■■□□□ 1.79
SNRNP200O75643 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP200O75643 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.22■■□□□ 1.79
SNRNP200O75643 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SNRNP200O75643 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNRNP200O75643 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms