Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
NDUFS4O43181 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.63■■□□□ 1.85
NDUFS4O43181 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.63■■□□□ 1.85
NDUFS4O43181 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
NDUFS4O43181 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NDUFS4O43181 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
NDUFS4O43181 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
NDUFS4O43181 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.6■■□□□ 1.85
NDUFS4O43181 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
NDUFS4O43181 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.59■■□□□ 1.85
NDUFS4O43181 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NDUFS4O43181 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NDUFS4O43181 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NDUFS4O43181 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.58■■□□□ 1.85
NDUFS4O43181 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.57■■□□□ 1.84
NDUFS4O43181 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
NDUFS4O43181 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
NDUFS4O43181 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NDUFS4O43181 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.54■■□□□ 1.84
NDUFS4O43181 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.53■■□□□ 1.84
NDUFS4O43181 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NDUFS4O43181 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.5■■□□□ 1.83
NDUFS4O43181 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.5■■□□□ 1.83
NDUFS4O43181 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.5■■□□□ 1.83
NDUFS4O43181 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
NDUFS4O43181 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NDUFS4O43181 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.48■■□□□ 1.83
NDUFS4O43181 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.47■■□□□ 1.83
NDUFS4O43181 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NDUFS4O43181 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.47■■□□□ 1.83
NDUFS4O43181 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NDUFS4O43181 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NDUFS4O43181 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.45■■□□□ 1.82
NDUFS4O43181 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NDUFS4O43181 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.43■■□□□ 1.82
NDUFS4O43181 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.43■■□□□ 1.82
NDUFS4O43181 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
NDUFS4O43181 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.41■■□□□ 1.82
NDUFS4O43181 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
NDUFS4O43181 RARRES2P7-201ENST00000567349 469 ntBASIC26.37■■□□□ 1.81
NDUFS4O43181 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.35■■□□□ 1.81
NDUFS4O43181 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NDUFS4O43181 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NDUFS4O43181 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NDUFS4O43181 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NDUFS4O43181 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.31■■□□□ 1.8
NDUFS4O43181 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NDUFS4O43181 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
NDUFS4O43181 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NDUFS4O43181 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NDUFS4O43181 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NDUFS4O43181 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.27■■□□□ 1.8
NDUFS4O43181 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS4O43181 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
NDUFS4O43181 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NDUFS4O43181 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.25■■□□□ 1.79
NDUFS4O43181 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.25■■□□□ 1.79
NDUFS4O43181 AC120057.4-201ENST00000624722 1615 ntBASIC26.25■■□□□ 1.79
NDUFS4O43181 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
NDUFS4O43181 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NDUFS4O43181 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NDUFS4O43181 SETD8P1-201ENST00000623146 1180 ntBASIC26.23■■□□□ 1.79
NDUFS4O43181 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NDUFS4O43181 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NDUFS4O43181 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
NDUFS4O43181 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NDUFS4O43181 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NDUFS4O43181 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NDUFS4O43181 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NDUFS4O43181 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.22■■□□□ 1.79
NDUFS4O43181 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NDUFS4O43181 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
NDUFS4O43181 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NDUFS4O43181 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
NDUFS4O43181 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
NDUFS4O43181 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
NDUFS4O43181 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NDUFS4O43181 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NDUFS4O43181 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.18■■□□□ 1.78
NDUFS4O43181 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
NDUFS4O43181 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NDUFS4O43181 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NDUFS4O43181 AL133380.1-201ENST00000506013 324 ntBASIC26.15■■□□□ 1.78
NDUFS4O43181 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NDUFS4O43181 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.14■■□□□ 1.77
NDUFS4O43181 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NDUFS4O43181 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
NDUFS4O43181 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
NDUFS4O43181 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NDUFS4O43181 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NDUFS4O43181 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
NDUFS4O43181 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
NDUFS4O43181 AC097358.2-201ENST00000607541 1159 ntBASIC26.05■■□□□ 1.76
NDUFS4O43181 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NDUFS4O43181 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
NDUFS4O43181 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
NDUFS4O43181 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NDUFS4O43181 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.03■■□□□ 1.76
NDUFS4O43181 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NDUFS4O43181 AC136428.2-201ENST00000563187 214 ntBASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms