Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC00959A0A1B0GUT2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00959A0A1B0GUT2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00959A0A1B0GUT2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC00959A0A1B0GUT2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00959A0A1B0GUT2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.88■□□□□ 0.61
LINC00959A0A1B0GUT2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC00959A0A1B0GUT2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC00959A0A1B0GUT2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC00959A0A1B0GUT2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.87■□□□□ 0.61
LINC00959A0A1B0GUT2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00959A0A1B0GUT2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LINC00959A0A1B0GUT2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00959A0A1B0GUT2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00959A0A1B0GUT2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00959A0A1B0GUT2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00959A0A1B0GUT2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.85■□□□□ 0.61
LINC00959A0A1B0GUT2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00959A0A1B0GUT2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00959A0A1B0GUT2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00959A0A1B0GUT2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00959A0A1B0GUT2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC00959A0A1B0GUT2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00959A0A1B0GUT2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.8■□□□□ 0.6
LINC00959A0A1B0GUT2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00959A0A1B0GUT2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00959A0A1B0GUT2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LINC00959A0A1B0GUT2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.79■□□□□ 0.6
LINC00959A0A1B0GUT2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00959A0A1B0GUT2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00959A0A1B0GUT2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00959A0A1B0GUT2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
LINC00959A0A1B0GUT2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00959A0A1B0GUT2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00959A0A1B0GUT2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00959A0A1B0GUT2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.77■□□□□ 0.6
LINC00959A0A1B0GUT2 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.77■□□□□ 0.6
LINC00959A0A1B0GUT2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00959A0A1B0GUT2 AC120057.4-201ENST00000624722 1615 ntBASIC18.77■□□□□ 0.6
LINC00959A0A1B0GUT2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LINC00959A0A1B0GUT2 ZNRF2P1-201ENST00000441407 443 ntBASIC18.75■□□□□ 0.59
LINC00959A0A1B0GUT2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00959A0A1B0GUT2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC00959A0A1B0GUT2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00959A0A1B0GUT2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00959A0A1B0GUT2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LINC00959A0A1B0GUT2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC00959A0A1B0GUT2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00959A0A1B0GUT2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00959A0A1B0GUT2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00959A0A1B0GUT2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00959A0A1B0GUT2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC00959A0A1B0GUT2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00959A0A1B0GUT2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.66■□□□□ 0.58
LINC00959A0A1B0GUT2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00959A0A1B0GUT2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00959A0A1B0GUT2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00959A0A1B0GUT2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00959A0A1B0GUT2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC00959A0A1B0GUT2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC00959A0A1B0GUT2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.63■□□□□ 0.57
LINC00959A0A1B0GUT2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC00959A0A1B0GUT2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00959A0A1B0GUT2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00959A0A1B0GUT2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00959A0A1B0GUT2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC00959A0A1B0GUT2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LINC00959A0A1B0GUT2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00959A0A1B0GUT2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC00959A0A1B0GUT2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00959A0A1B0GUT2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00959A0A1B0GUT2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00959A0A1B0GUT2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.58■□□□□ 0.57
LINC00959A0A1B0GUT2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC00959A0A1B0GUT2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00959A0A1B0GUT2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00959A0A1B0GUT2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00959A0A1B0GUT2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00959A0A1B0GUT2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00959A0A1B0GUT2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00959A0A1B0GUT2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00959A0A1B0GUT2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00959A0A1B0GUT2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00959A0A1B0GUT2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC00959A0A1B0GUT2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC00959A0A1B0GUT2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00959A0A1B0GUT2 DYNLL1-208ENST00000550178 581 ntBASIC18.53■□□□□ 0.56
LINC00959A0A1B0GUT2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00959A0A1B0GUT2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC00959A0A1B0GUT2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LINC00959A0A1B0GUT2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00959A0A1B0GUT2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00959A0A1B0GUT2 ABCB10P1-201ENST00000614297 2181 ntBASIC18.5■□□□□ 0.55
LINC00959A0A1B0GUT2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00959A0A1B0GUT2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
LINC00959A0A1B0GUT2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC00959A0A1B0GUT2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00959A0A1B0GUT2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC00959A0A1B0GUT2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00959A0A1B0GUT2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms