Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.41■■■□□ 2.78
CCDC196A0A1B0GTZ2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
CCDC196A0A1B0GTZ2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.41■■■□□ 2.78
CCDC196A0A1B0GTZ2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CCDC196A0A1B0GTZ2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
CCDC196A0A1B0GTZ2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCDC196A0A1B0GTZ2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCDC196A0A1B0GTZ2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CCDC196A0A1B0GTZ2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
CCDC196A0A1B0GTZ2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CCDC196A0A1B0GTZ2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.37■■■□□ 2.77
CCDC196A0A1B0GTZ2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
CCDC196A0A1B0GTZ2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CCDC196A0A1B0GTZ2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CCDC196A0A1B0GTZ2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
CCDC196A0A1B0GTZ2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.33■■■□□ 2.77
CCDC196A0A1B0GTZ2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CCDC196A0A1B0GTZ2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.32■■■□□ 2.76
CCDC196A0A1B0GTZ2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC196A0A1B0GTZ2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC196A0A1B0GTZ2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.28■■■□□ 2.76
CCDC196A0A1B0GTZ2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.26■■■□□ 2.76
CCDC196A0A1B0GTZ2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.26■■■□□ 2.76
CCDC196A0A1B0GTZ2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC196A0A1B0GTZ2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.25■■■□□ 2.75
CCDC196A0A1B0GTZ2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.25■■■□□ 2.75
CCDC196A0A1B0GTZ2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
CCDC196A0A1B0GTZ2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.2■■■□□ 2.75
CCDC196A0A1B0GTZ2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
CCDC196A0A1B0GTZ2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CCDC196A0A1B0GTZ2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.17■■■□□ 2.74
CCDC196A0A1B0GTZ2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.17■■■□□ 2.74
CCDC196A0A1B0GTZ2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CCDC196A0A1B0GTZ2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
CCDC196A0A1B0GTZ2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.12■■■□□ 2.73
CCDC196A0A1B0GTZ2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.12■■■□□ 2.73
CCDC196A0A1B0GTZ2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.11■■■□□ 2.73
CCDC196A0A1B0GTZ2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CCDC196A0A1B0GTZ2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.09■■■□□ 2.73
CCDC196A0A1B0GTZ2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.08■■■□□ 2.73
CCDC196A0A1B0GTZ2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CCDC196A0A1B0GTZ2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CCDC196A0A1B0GTZ2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.05■■■□□ 2.72
CCDC196A0A1B0GTZ2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC32.04■■■□□ 2.72
CCDC196A0A1B0GTZ2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CCDC196A0A1B0GTZ2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.03■■■□□ 2.72
CCDC196A0A1B0GTZ2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC196A0A1B0GTZ2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC196A0A1B0GTZ2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CCDC196A0A1B0GTZ2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.01■■■□□ 2.71
CCDC196A0A1B0GTZ2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
CCDC196A0A1B0GTZ2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32■■■□□ 2.71
CCDC196A0A1B0GTZ2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
CCDC196A0A1B0GTZ2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC196A0A1B0GTZ2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC196A0A1B0GTZ2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC196A0A1B0GTZ2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
CCDC196A0A1B0GTZ2 AC120057.4-201ENST00000624722 1615 ntBASIC31.97■■■□□ 2.71
CCDC196A0A1B0GTZ2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC196A0A1B0GTZ2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
CCDC196A0A1B0GTZ2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
CCDC196A0A1B0GTZ2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.96■■■□□ 2.71
CCDC196A0A1B0GTZ2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC196A0A1B0GTZ2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC196A0A1B0GTZ2 RARRES2P7-201ENST00000567349 469 ntBASIC31.94■■■□□ 2.7
CCDC196A0A1B0GTZ2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CCDC196A0A1B0GTZ2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.91■■■□□ 2.7
CCDC196A0A1B0GTZ2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC196A0A1B0GTZ2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC196A0A1B0GTZ2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC196A0A1B0GTZ2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC196A0A1B0GTZ2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC196A0A1B0GTZ2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC196A0A1B0GTZ2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC196A0A1B0GTZ2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC196A0A1B0GTZ2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC196A0A1B0GTZ2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC196A0A1B0GTZ2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC196A0A1B0GTZ2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.83■■■□□ 2.69
CCDC196A0A1B0GTZ2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC196A0A1B0GTZ2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.81■■■□□ 2.68
CCDC196A0A1B0GTZ2 AL133380.1-201ENST00000506013 324 ntBASIC31.8■■■□□ 2.68
CCDC196A0A1B0GTZ2 SETD8P1-201ENST00000623146 1180 ntBASIC31.78■■■□□ 2.68
CCDC196A0A1B0GTZ2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC196A0A1B0GTZ2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC196A0A1B0GTZ2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC196A0A1B0GTZ2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC196A0A1B0GTZ2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
CCDC196A0A1B0GTZ2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.73■■■□□ 2.67
CCDC196A0A1B0GTZ2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC196A0A1B0GTZ2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC196A0A1B0GTZ2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CCDC196A0A1B0GTZ2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC196A0A1B0GTZ2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC196A0A1B0GTZ2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC196A0A1B0GTZ2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC196A0A1B0GTZ2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
CCDC196A0A1B0GTZ2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CCDC196A0A1B0GTZ2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC196A0A1B0GTZ2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms