Protein–RNA interactions for Protein: A0A0C4DH29

IGHV1-3, Immunoglobulin heavy variable 1-3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-3A0A0C4DH29 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.49■■□□□ 1.19
IGHV1-3A0A0C4DH29 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.49■■□□□ 1.19
IGHV1-3A0A0C4DH29 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.49■■□□□ 1.19
IGHV1-3A0A0C4DH29 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
IGHV1-3A0A0C4DH29 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
IGHV1-3A0A0C4DH29 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
IGHV1-3A0A0C4DH29 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IGHV1-3A0A0C4DH29 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.47■■□□□ 1.19
IGHV1-3A0A0C4DH29 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
IGHV1-3A0A0C4DH29 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
IGHV1-3A0A0C4DH29 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
IGHV1-3A0A0C4DH29 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
IGHV1-3A0A0C4DH29 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
IGHV1-3A0A0C4DH29 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
IGHV1-3A0A0C4DH29 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.42■■□□□ 1.18
IGHV1-3A0A0C4DH29 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.41■■□□□ 1.18
IGHV1-3A0A0C4DH29 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.41■■□□□ 1.18
IGHV1-3A0A0C4DH29 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
IGHV1-3A0A0C4DH29 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
IGHV1-3A0A0C4DH29 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
IGHV1-3A0A0C4DH29 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
IGHV1-3A0A0C4DH29 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.37■■□□□ 1.17
IGHV1-3A0A0C4DH29 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
IGHV1-3A0A0C4DH29 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.36■■□□□ 1.17
IGHV1-3A0A0C4DH29 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.36■■□□□ 1.17
IGHV1-3A0A0C4DH29 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
IGHV1-3A0A0C4DH29 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
IGHV1-3A0A0C4DH29 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.35■■□□□ 1.17
IGHV1-3A0A0C4DH29 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IGHV1-3A0A0C4DH29 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
IGHV1-3A0A0C4DH29 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.33■■□□□ 1.17
IGHV1-3A0A0C4DH29 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.33■■□□□ 1.17
IGHV1-3A0A0C4DH29 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.31■■□□□ 1.16
IGHV1-3A0A0C4DH29 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
IGHV1-3A0A0C4DH29 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.3■■□□□ 1.16
IGHV1-3A0A0C4DH29 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
IGHV1-3A0A0C4DH29 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.26■■□□□ 1.15
IGHV1-3A0A0C4DH29 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.25■■□□□ 1.15
IGHV1-3A0A0C4DH29 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IGHV1-3A0A0C4DH29 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
IGHV1-3A0A0C4DH29 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.24■■□□□ 1.15
IGHV1-3A0A0C4DH29 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IGHV1-3A0A0C4DH29 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.23■■□□□ 1.15
IGHV1-3A0A0C4DH29 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.23■■□□□ 1.15
IGHV1-3A0A0C4DH29 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
IGHV1-3A0A0C4DH29 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.22■■□□□ 1.15
IGHV1-3A0A0C4DH29 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IGHV1-3A0A0C4DH29 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IGHV1-3A0A0C4DH29 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IGHV1-3A0A0C4DH29 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
IGHV1-3A0A0C4DH29 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
IGHV1-3A0A0C4DH29 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IGHV1-3A0A0C4DH29 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IGHV1-3A0A0C4DH29 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
IGHV1-3A0A0C4DH29 AC120057.4-201ENST00000624722 1615 ntBASIC22.19■■□□□ 1.14
IGHV1-3A0A0C4DH29 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IGHV1-3A0A0C4DH29 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
IGHV1-3A0A0C4DH29 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IGHV1-3A0A0C4DH29 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
IGHV1-3A0A0C4DH29 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
IGHV1-3A0A0C4DH29 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.17■■□□□ 1.14
IGHV1-3A0A0C4DH29 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
IGHV1-3A0A0C4DH29 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.17■■□□□ 1.14
IGHV1-3A0A0C4DH29 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
IGHV1-3A0A0C4DH29 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
IGHV1-3A0A0C4DH29 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
IGHV1-3A0A0C4DH29 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
IGHV1-3A0A0C4DH29 RARRES2P7-201ENST00000567349 469 ntBASIC22.14■■□□□ 1.13
IGHV1-3A0A0C4DH29 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
IGHV1-3A0A0C4DH29 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
IGHV1-3A0A0C4DH29 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
IGHV1-3A0A0C4DH29 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
IGHV1-3A0A0C4DH29 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.1■■□□□ 1.13
IGHV1-3A0A0C4DH29 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
IGHV1-3A0A0C4DH29 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
IGHV1-3A0A0C4DH29 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
IGHV1-3A0A0C4DH29 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
IGHV1-3A0A0C4DH29 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
IGHV1-3A0A0C4DH29 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
IGHV1-3A0A0C4DH29 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.04■■□□□ 1.12
IGHV1-3A0A0C4DH29 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
IGHV1-3A0A0C4DH29 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.03■■□□□ 1.12
IGHV1-3A0A0C4DH29 AL133380.1-201ENST00000506013 324 ntBASIC22.03■■□□□ 1.12
IGHV1-3A0A0C4DH29 SETD8P1-201ENST00000623146 1180 ntBASIC22.03■■□□□ 1.12
IGHV1-3A0A0C4DH29 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
IGHV1-3A0A0C4DH29 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
IGHV1-3A0A0C4DH29 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
IGHV1-3A0A0C4DH29 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
IGHV1-3A0A0C4DH29 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IGHV1-3A0A0C4DH29 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IGHV1-3A0A0C4DH29 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
IGHV1-3A0A0C4DH29 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22■■□□□ 1.11
IGHV1-3A0A0C4DH29 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
IGHV1-3A0A0C4DH29 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IGHV1-3A0A0C4DH29 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
IGHV1-3A0A0C4DH29 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.96■■□□□ 1.11
IGHV1-3A0A0C4DH29 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
IGHV1-3A0A0C4DH29 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IGHV1-3A0A0C4DH29 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
IGHV1-3A0A0C4DH29 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms