Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV22A0A0B4J277 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV22A0A0B4J277 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV22A0A0B4J277 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV22A0A0B4J277 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV22A0A0B4J277 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV22A0A0B4J277 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV22A0A0B4J277 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV22A0A0B4J277 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV22A0A0B4J277 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV22A0A0B4J277 SHF-206ENST00000560471 2499 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV22A0A0B4J277 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV22A0A0B4J277 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV22A0A0B4J277 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 ABCB10P3-201ENST00000561950 2166 ntBASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV22A0A0B4J277 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV22A0A0B4J277 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV22A0A0B4J277 AC145285.7-201ENST00000614819 1539 ntBASIC15.78■□□□□ 0.12
TRAV22A0A0B4J277 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV22A0A0B4J277 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV22A0A0B4J277 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV22A0A0B4J277 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV22A0A0B4J277 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV22A0A0B4J277 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV22A0A0B4J277 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV22A0A0B4J277 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV22A0A0B4J277 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV22A0A0B4J277 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV22A0A0B4J277 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV22A0A0B4J277 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 ABCB10P1-201ENST00000614297 2181 ntBASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV22A0A0B4J277 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV22A0A0B4J277 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV22A0A0B4J277 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV22A0A0B4J277 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV22A0A0B4J277 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV22A0A0B4J277 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV22A0A0B4J277 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV22A0A0B4J277 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV22A0A0B4J277 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV22A0A0B4J277 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV22A0A0B4J277 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV22A0A0B4J277 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV22A0A0B4J277 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV22A0A0B4J277 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV22A0A0B4J277 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV22A0A0B4J277 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV22A0A0B4J277 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV22A0A0B4J277 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV22A0A0B4J277 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV22A0A0B4J277 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV22A0A0B4J277 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV22A0A0B4J277 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV22A0A0B4J277 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV22A0A0B4J277 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV22A0A0B4J277 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV22A0A0B4J277 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV22A0A0B4J277 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV22A0A0B4J277 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV22A0A0B4J277 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV22A0A0B4J277 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV22A0A0B4J277 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV22A0A0B4J277 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV22A0A0B4J277 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV22A0A0B4J277 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV22A0A0B4J277 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV22A0A0B4J277 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV22A0A0B4J277 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV22A0A0B4J277 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV22A0A0B4J277 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV22A0A0B4J277 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV22A0A0B4J277 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV22A0A0B4J277 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV22A0A0B4J277 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV22A0A0B4J277 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV22A0A0B4J277 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV22A0A0B4J277 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV22A0A0B4J277 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV22A0A0B4J277 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TRAV22A0A0B4J277 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV22A0A0B4J277 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV22A0A0B4J277 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV22A0A0B4J277 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV22A0A0B4J277 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV22A0A0B4J277 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms