Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRAV16A0A0A6YYK6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV16A0A0A6YYK6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV16A0A0A6YYK6 AC006077.2-201ENST00000623591 457 ntBASIC19.13■□□□□ 0.65
TRAV16A0A0A6YYK6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV16A0A0A6YYK6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV16A0A0A6YYK6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV16A0A0A6YYK6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV16A0A0A6YYK6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV16A0A0A6YYK6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV16A0A0A6YYK6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV16A0A0A6YYK6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV16A0A0A6YYK6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV16A0A0A6YYK6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV16A0A0A6YYK6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV16A0A0A6YYK6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV16A0A0A6YYK6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV16A0A0A6YYK6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV16A0A0A6YYK6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV16A0A0A6YYK6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV16A0A0A6YYK6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV16A0A0A6YYK6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV16A0A0A6YYK6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV16A0A0A6YYK6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV16A0A0A6YYK6 ZNRF2P1-201ENST00000441407 443 ntBASIC19■□□□□ 0.63
TRAV16A0A0A6YYK6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV16A0A0A6YYK6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV16A0A0A6YYK6 AC145285.7-201ENST00000614819 1539 ntBASIC19■□□□□ 0.63
TRAV16A0A0A6YYK6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV16A0A0A6YYK6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV16A0A0A6YYK6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV16A0A0A6YYK6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TRAV16A0A0A6YYK6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV16A0A0A6YYK6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV16A0A0A6YYK6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV16A0A0A6YYK6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV16A0A0A6YYK6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV16A0A0A6YYK6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV16A0A0A6YYK6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV16A0A0A6YYK6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 AC139426.1-201ENST00000568218 2529 ntBASIC18.94■□□□□ 0.62
TRAV16A0A0A6YYK6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV16A0A0A6YYK6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV16A0A0A6YYK6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV16A0A0A6YYK6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV16A0A0A6YYK6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV16A0A0A6YYK6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV16A0A0A6YYK6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV16A0A0A6YYK6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV16A0A0A6YYK6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRAV16A0A0A6YYK6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV16A0A0A6YYK6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV16A0A0A6YYK6 ABCB10P3-201ENST00000561950 2166 ntBASIC18.88■□□□□ 0.61
TRAV16A0A0A6YYK6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV16A0A0A6YYK6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV16A0A0A6YYK6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV16A0A0A6YYK6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAV16A0A0A6YYK6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV16A0A0A6YYK6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV16A0A0A6YYK6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRAV16A0A0A6YYK6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV16A0A0A6YYK6 ABCB10P1-201ENST00000614297 2181 ntBASIC18.83■□□□□ 0.6
TRAV16A0A0A6YYK6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.82■□□□□ 0.6
TRAV16A0A0A6YYK6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV16A0A0A6YYK6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV16A0A0A6YYK6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV16A0A0A6YYK6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV16A0A0A6YYK6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV16A0A0A6YYK6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV16A0A0A6YYK6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV16A0A0A6YYK6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV16A0A0A6YYK6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV16A0A0A6YYK6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV16A0A0A6YYK6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRAV16A0A0A6YYK6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV16A0A0A6YYK6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV16A0A0A6YYK6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV16A0A0A6YYK6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV16A0A0A6YYK6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV16A0A0A6YYK6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV16A0A0A6YYK6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV16A0A0A6YYK6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRAV16A0A0A6YYK6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV16A0A0A6YYK6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAV16A0A0A6YYK6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV16A0A0A6YYK6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV16A0A0A6YYK6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV16A0A0A6YYK6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV16A0A0A6YYK6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms