Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.313e-6■■■□□ 17.7
FUBP3Q96I24 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.313e-6■■■□□ 17.7
FUBP3Q96I24 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.563e-7■■■□□ 17.7
FUBP3Q96I24 SMOC1-202ENST00000381280 3666 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.543e-7■■■□□ 17.7
FUBP3Q96I24 DUSP16-202ENST00000298573 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.682e-9■■■□□ 17.7
FUBP3Q96I24 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.012e-7■■■□□ 17.7
FUBP3Q96I24 MFSD14B-202ENST00000428393 2275 ntTSL 5 BASIC9.94□□□□□ -0.822e-7■■■□□ 17.7
FUBP3Q96I24 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.64□□□□□ -1.357e-7■■■□□ 17.7
FUBP3Q96I24 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.755e-8■■■□□ 17.7
FUBP3Q96I24 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.641e-6■■■□□ 17.7
FUBP3Q96I24 SLC35E1-201ENST00000409648 3691 ntTSL 27.75□□□□□ -1.171e-6■■■□□ 17.7
FUBP3Q96I24 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.58■■□□□ 1.052e-8■■■□□ 17.7
FUBP3Q96I24 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.212e-8■■■□□ 17.7
FUBP3Q96I24 HNMT-205ENST00000467390 532 ntTSL 26.88□□□□□ -1.311e-7■■■□□ 17.7
FUBP3Q96I24 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.441e-7■■■□□ 17.7
FUBP3Q96I24 HNMT-208ENST00000485653 675 ntTSL 54.06□□□□□ -1.761e-7■■■□□ 17.7
FUBP3Q96I24 MED28-203ENST00000503945 879 ntTSL 1 (best)12.8□□□□□ -0.361e-7■■■□□ 17.7
FUBP3Q96I24 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.221e-7■■■□□ 17.7
FUBP3Q96I24 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.432e-8■■■□□ 17.6
FUBP3Q96I24 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.491e-6■■■□□ 17.6
FUBP3Q96I24 CASD1-206ENST00000489196 2199 ntTSL 33.3□□□□□ -1.881e-6■■■□□ 17.6
FUBP3Q96I24 CASD1-205ENST00000471944 2263 ntTSL 22.49□□□□□ -2.011e-6■■■□□ 17.6
FUBP3Q96I24 MTX2-202ENST00000420864 1592 ntTSL 1 (best)23.41■■□□□ 1.341e-10■■■□□ 17.6
FUBP3Q96I24 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.291e-10■■■□□ 17.6
FUBP3Q96I24 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC9.19□□□□□ -0.945e-6■■■□□ 17.6
FUBP3Q96I24 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.94■□□□□ 0.625e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.18■□□□□ 0.185e-8■■■□□ 17.6
FUBP3Q96I24 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.045e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-201ENST00000223084 1295 ntTSL 213.51□□□□□ -0.255e-8■■■□□ 17.6
FUBP3Q96I24 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.365e-8■■■□□ 17.6
FUBP3Q96I24 DPM1-202ENST00000371584 1073 ntTSL 512.71□□□□□ -0.375e-8■■■□□ 17.6
FUBP3Q96I24 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC11.56□□□□□ -0.565e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-210ENST00000480956 1736 ntTSL 39.71□□□□□ -0.855e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-202ENST00000409292 538 ntTSL 2 BASIC8.31□□□□□ -1.085e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.125e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.54□□□□□ -1.25e-8■■■□□ 17.6
FUBP3Q96I24 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.235e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-209ENST00000468872 636 ntTSL 26.82□□□□□ -1.325e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.82□□□□□ -1.325e-8■■■□□ 17.6
FUBP3Q96I24 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.18□□□□□ -1.425e-8■■■□□ 17.6
FUBP3Q96I24 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.595e-8■■■□□ 17.6
FUBP3Q96I24 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.531e-6■■■□□ 17.6
FUBP3Q96I24 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.153e-10■■■□□ 17.5
FUBP3Q96I24 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.423e-10■■■□□ 17.5
FUBP3Q96I24 PUS10-206ENST00000602599 6366 ntTSL 1 (best)4.69□□□□□ -1.663e-10■■■□□ 17.5
FUBP3Q96I24 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.23□□□□□ -0.454e-7■■■□□ 17.5
FUBP3Q96I24 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.61□□□□□ -1.354e-7■■■□□ 17.5
FUBP3Q96I24 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.474e-7■■■□□ 17.5
FUBP3Q96I24 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.69□□□□□ -0.385e-6■■■□□ 17.5
FUBP3Q96I24 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.16□□□□□ -0.625e-6■■■□□ 17.5
FUBP3Q96I24 SON-205ENST00000421541 1151 ntTSL 1 (best)5.3□□□□□ -1.565e-6■■■□□ 17.5
FUBP3Q96I24 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.79■■□□□ 1.49e-7■■■□□ 17.5
FUBP3Q96I24 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.169e-7■■■□□ 17.5
FUBP3Q96I24 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.179e-8■■■□□ 17.4
FUBP3Q96I24 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.299e-8■■■□□ 17.4
FUBP3Q96I24 RIF1-207ENST00000454583 3552 ntTSL 25.25□□□□□ -1.579e-8■■■□□ 17.4
FUBP3Q96I24 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.251e-6■■■□□ 17.4
FUBP3Q96I24 CHERP-203ENST00000546361 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.493e-8■■■□□ 17.3
FUBP3Q96I24 CHERP-201ENST00000198939 4084 ntTSL 5 BASIC10.03□□□□□ -0.83e-8■■■□□ 17.3
FUBP3Q96I24 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.623e-46■■■□□ 17.3
FUBP3Q96I24 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.823e-46■■■□□ 17.3
FUBP3Q96I24 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.095e-19■■■□□ 17.3
FUBP3Q96I24 BNIP3-202ENST00000540159 3066 ntTSL 1 (best)13.5□□□□□ -0.253e-9■■■□□ 17.3
FUBP3Q96I24 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.634e-7■■■□□ 17.3
FUBP3Q96I24 FUBP1-213ENST00000492724 583 ntTSL 314.87□□□□□ -0.033e-10■■■□□ 17.3
FUBP3Q96I24 FUBP1-212ENST00000492405 668 ntTSL 314.87□□□□□ -0.033e-10■■■□□ 17.3
FUBP3Q96I24 FUBP1-201ENST00000294623 2201 ntTSL 1 (best)13.58□□□□□ -0.243e-10■■■□□ 17.3
FUBP3Q96I24 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.323e-10■■■□□ 17.3
FUBP3Q96I24 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC11.7□□□□□ -0.543e-10■■■□□ 17.3
FUBP3Q96I24 FUBP1-210ENST00000488814 612 ntTSL 36.81□□□□□ -1.323e-10■■■□□ 17.3
FUBP3Q96I24 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.161e-6■■■□□ 17.2
FUBP3Q96I24 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.11e-11■■■□□ 17.2
FUBP3Q96I24 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.821e-11■■■□□ 17.2
FUBP3Q96I24 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.691e-11■■■□□ 17.2
FUBP3Q96I24 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)12.86□□□□□ -0.351e-11■■■□□ 17.2
FUBP3Q96I24 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)9.38□□□□□ -0.911e-11■■■□□ 17.2
FUBP3Q96I24 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.951e-11■■■□□ 17.2
FUBP3Q96I24 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.971e-11■■■□□ 17.2
FUBP3Q96I24 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.24e-6■■■□□ 17.2
FUBP3Q96I24 SIAH1-207ENST00000568007 2683 ntTSL 1 (best)12.39□□□□□ -0.434e-6■■■□□ 17.2
FUBP3Q96I24 SIAH1-201ENST00000356721 2415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -14e-6■■■□□ 17.2
FUBP3Q96I24 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.83□□□□□ -1.484e-6■■■□□ 17.2
FUBP3Q96I24 SIAH1-205ENST00000565620 477 ntTSL 24.91□□□□□ -1.624e-6■■■□□ 17.2
FUBP3Q96I24 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.012e-6■■■□□ 17.2
FUBP3Q96I24 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.762e-6■■■□□ 17.2
FUBP3Q96I24 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.56□□□□□ -0.084e-7■■■□□ 17.1
FUBP3Q96I24 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.55□□□□□ -1.524e-7■■■□□ 17.1
FUBP3Q96I24 MACF1-223ENST00000496360 2080 ntTSL 214.22□□□□□ -0.136e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-207ENST00000442046 2299 ntTSL 514.2□□□□□ -0.146e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-202ENST00000360115 2824 ntTSL 513.03□□□□□ -0.326e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-208ENST00000446276 2559 ntTSL 512.5□□□□□ -0.416e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-225ENST00000497807 2689 ntTSL 1 (best)11.1□□□□□ -0.636e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-205ENST00000372925 14496 ntTSL 55.77□□□□□ -1.496e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.56e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.72□□□□□ -1.656e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.766e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.86e-18■■■□□ 17.1
FUBP3Q96I24 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.886e-18■■■□□ 17.1
FUBP3Q96I24 PUM2-209ENST00000440577 4352 ntTSL 1 (best)6.29□□□□□ -1.45e-7■■■□□ 17.1
FUBP3Q96I24 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.16■□□□□ 0.662e-6■■■□□ 17.1
Retrieved 100 of 4,568 protein–RNA pairs in 354.2 ms