RNA–Protein interactions for RNA: ENST00000338179.6

LBR-202, Transcript of lamin B receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LBR, Length 3,812 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-202ENST00000338179 CHIC1Q5VXU3 224 aa9.44□□□□□ -0.9
LBR-202ENST00000338179 AEBP2Q6ZN18 517 aaPredicted RBP9.3□□□□□ -0.92
LBR-202ENST00000338179 PHF23Q9BUL5 403 aaPredicted RBP8.52□□□□□ -1.04
LBR-202ENST00000338179 EHMT2Q96KQ7 1210 aa8.33□□□□□ -1.08
LBR-202ENST00000338179 NISCHQ9Y2I1 1504 aa8.02□□□□□ -1.13
LBR-202ENST00000338179 PLPPR3Q6T4P5 718 aa7.94□□□□□ -1.14
LBR-202ENST00000338179 KCNA4P22459 653 aa7.85□□□□□ -1.15
LBR-202ENST00000338179 ADRA2BP18089 450 aa7.76□□□□□ -1.17
LBR-202ENST00000338179 SLC24A1O60721 1099 aa7.64□□□□□ -1.19
LBR-202ENST00000338179 CSRNP3Q8WYN3 585 aa7.61□□□□□ -1.19
LBR-202ENST00000338179 SENP3Q9H4L4 574 aaPredicted RBP7.58□□□□□ -1.2
LBR-202ENST00000338179 SLC4A1APQ9BWU0 796 aaKnown RBP7.49□□□□□ -1.21
LBR-202ENST00000338179 RTN4Q9NQC3 1192 aaKnown RBP7.48□□□□□ -1.21
LBR-202ENST00000338179 PPP6R1Q9UPN7 881 aa7.47□□□□□ -1.21
LBR-202ENST00000338179 ZBTB22O15209 634 aa7.23□□□□□ -1.25
LBR-202ENST00000338179 PPP4R3CPQ6ZMV5 832 aa7.16□□□□□ -1.26
LBR-202ENST00000338179 FOXD1Q16676 465 aa7.13□□□□□ -1.27
LBR-202ENST00000338179 AMER1Q5JTC6 1135 aaPredicted RBP7.13□□□□□ -1.27
LBR-202ENST00000338179 CCDC180Q9P1Z9 1646 aa7.09□□□□□ -1.27
LBR-202ENST00000338179 NPM3O75607 178 aaKnown RBP7.08□□□□□ -1.28
LBR-202ENST00000338179 PRKCSHP14314 528 aaPredicted RBP7□□□□□ -1.29
LBR-202ENST00000338179 NCBP3Q53F19 620 aaKnown RBP6.99□□□□□ -1.29
LBR-202ENST00000338179 FKBP8Q14318 412 aa6.97□□□□□ -1.29
LBR-202ENST00000338179 PIAS4Q8N2W9 510 aaPredicted RBP6.97□□□□□ -1.29
LBR-202ENST00000338179 DCAF1Q9Y4B6 1507 aa6.93□□□□□ -1.3
LBR-202ENST00000338179 ZCCHC6Q5VYS8 1495 aaKnown RBP6.9□□□□□ -1.31
LBR-202ENST00000338179 DCAF8L2P0C7V8 631 aa6.85□□□□□ -1.31
LBR-202ENST00000338179 FOXD4L1Q9NU39 408 aa6.85□□□□□ -1.31
LBR-202ENST00000338179 ABCC9O60706 1549 aa6.79□□□□□ -1.32
LBR-202ENST00000338179 HAP1P54257 671 aaPredicted RBP6.77□□□□□ -1.33
LBR-202ENST00000338179 MYO15BQ96JP2 1530 aa6.76□□□□□ -1.33
LBR-202ENST00000338179 MAPK8IP2Q13387 824 aaPredicted RBP6.7□□□□□ -1.34
LBR-202ENST00000338179 CNKSR2Q8WXI2 1034 aa6.69□□□□□ -1.34
LBR-202ENST00000338179 TPRNQ4KMQ1 711 aa6.68□□□□□ -1.34
LBR-202ENST00000338179 PLCB2Q00722 1185 aa6.66□□□□□ -1.34
LBR-202ENST00000338179 POTEDQ86YR6 584 aa6.66□□□□□ -1.34
LBR-202ENST00000338179 TAOK2Q9UL54 1235 aa6.65□□□□□ -1.34
LBR-202ENST00000338179 RB1CC1Q8TDY2 1594 aa6.64□□□□□ -1.35
LBR-202ENST00000338179 NACADO15069 1562 aa6.62□□□□□ -1.35
LBR-202ENST00000338179 BCANQ96GW7 911 aa6.59□□□□□ -1.35
LBR-202ENST00000338179 TULP1O00294 542 aaPredicted RBP6.56□□□□□ -1.36
LBR-202ENST00000338179 TIMELESSQ9UNS1 1208 aa6.55□□□□□ -1.36
LBR-202ENST00000338179 UNC13AQ9UPW8 1703 aa6.54□□□□□ -1.36
LBR-202ENST00000338179 SLC4A2P04920 1241 aa6.53□□□□□ -1.36
LBR-202ENST00000338179 SHROOM4Q9ULL8 1493 aa6.53□□□□□ -1.36
LBR-202ENST00000338179 FBLN2P98095 1184 aa6.53□□□□□ -1.36
LBR-202ENST00000338179 SCAF1Q9H7N4 1312 aaKnown RBP6.52□□□□□ -1.37
LBR-202ENST00000338179 BICRAQ9NZM4 1560 aa6.47□□□□□ -1.37
LBR-202ENST00000338179 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
LBR-202ENST00000338179 EIF4G1Q04637 1599 aaKnown RBP6.47□□□□□ -1.37
LBR-202ENST00000338179 MYT1Q01538 1121 aa6.47□□□□□ -1.37
LBR-202ENST00000338179 KDM2AQ9Y2K7 1162 aa6.45□□□□□ -1.38
LBR-202ENST00000338179 ATF5Q9Y2D1 282 aaPredicted RBP6.44□□□□□ -1.38
LBR-202ENST00000338179 PELP1Q8IZL8 1130 aaKnown RBP6.44□□□□□ -1.38
LBR-202ENST00000338179 PAXIP1Q6ZW49 1069 aaPredicted RBP6.41□□□□□ -1.38
LBR-202ENST00000338179 DNAJC5BQ9UF47 199 aa6.41□□□□□ -1.38
LBR-202ENST00000338179 MYCNP04198 464 aaPredicted RBP6.39□□□□□ -1.39
LBR-202ENST00000338179 RNF216Q9NWF9 866 aaPredicted RBP6.36□□□□□ -1.39
LBR-202ENST00000338179 DAXXQ9UER7 740 aaPredicted RBP6.35□□□□□ -1.39
LBR-202ENST00000338179 DCAF8L1A6NGE4 600 aa6.34□□□□□ -1.39
LBR-202ENST00000338179 HRCP23327 699 aa6.32□□□□□ -1.4
LBR-202ENST00000338179 TSHZ2Q9NRE2 1034 aa6.32□□□□□ -1.4
LBR-202ENST00000338179 VSIG10Q8N0Z9 540 aa6.32□□□□□ -1.4
LBR-202ENST00000338179 IFNLR1Q8IU57 520 aaPredicted RBP6.31□□□□□ -1.4
LBR-202ENST00000338179 TTBK1Q5TCY1 1321 aaPredicted RBP6.31□□□□□ -1.4
LBR-202ENST00000338179 VASPP50552 380 aaPredicted RBP6.3□□□□□ -1.4
LBR-202ENST00000338179 PKD2Q13563 968 aa6.3□□□□□ -1.4
LBR-202ENST00000338179 BAZ1AQ9NRL2 1556 aaPredicted RBP6.29□□□□□ -1.4
LBR-202ENST00000338179 GTF3C3Q9Y5Q9 886 aa6.29□□□□□ -1.4
LBR-202ENST00000338179 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.28□□□□□ -1.4
LBR-202ENST00000338179 NPM1P06748 294 aaKnown RBP eCLIP6.28□□□□□ -1.4
LBR-202ENST00000338179 CC2D2AQ9P2K1 1620 aa6.27□□□□□ -1.41
LBR-202ENST00000338179 ATXN8OSP0DMR3 200 aa6.27□□□□□ -1.41
LBR-202ENST00000338179 PEG3Q9GZU2 1588 aa6.27□□□□□ -1.41
LBR-202ENST00000338179 NBR1Q14596 966 aa6.26□□□□□ -1.41
LBR-202ENST00000338179 RSF1Q96T23 1441 aaPredicted RBP6.26□□□□□ -1.41
LBR-202ENST00000338179 SUPT5HO00267 1087 aaKnown RBP6.25□□□□□ -1.41
LBR-202ENST00000338179 SPDYE4A6NLX3 237 aa6.24□□□□□ -1.41
LBR-202ENST00000338179 KLHL34Q8N239 644 aa6.23□□□□□ -1.41
LBR-202ENST00000338179 FBXO3Q9UK99 471 aa6.23□□□□□ -1.41
LBR-202ENST00000338179 C14orf37Q86TY3 774 aa6.22□□□□□ -1.41
LBR-202ENST00000338179 ECM2O94769 699 aaPredicted RBP6.21□□□□□ -1.41
LBR-202ENST00000338179 PABPN1Q86U42 306 aaKnown RBP eCLIP6.2□□□□□ -1.42
LBR-202ENST00000338179 WRNQ14191 1432 aaPredicted RBP eCLIP6.2□□□□□ -1.42
LBR-202ENST00000338179 CECR2Q9BXF3 1484 aa6.19□□□□□ -1.42
LBR-202ENST00000338179 CHGAP10645 457 aaKnown RBP6.19□□□□□ -1.42
LBR-202ENST00000338179 SCRIBQ14160 1630 aa6.19□□□□□ -1.42
LBR-202ENST00000338179 ARXQ96QS3 562 aa6.18□□□□□ -1.42
LBR-202ENST00000338179 RGL2O15211 777 aa6.18□□□□□ -1.42
LBR-202ENST00000338179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.18□□□□□ -1.428e-6■□□□□ 8.2
LBR-202ENST00000338179 PODXL2Q9NZ53 605 aa6.18□□□□□ -1.42
LBR-202ENST00000338179 SPRYD3Q8NCJ5 442 aa6.16□□□□□ -1.42
LBR-202ENST00000338179 HOMEZQ8IX15 550 aa6.16□□□□□ -1.42
LBR-202ENST00000338179 TOP2AP11388 1531 aaKnown RBP6.16□□□□□ -1.42
LBR-202ENST00000338179 HOXD11P31277 338 aaPredicted RBP6.15□□□□□ -1.42
LBR-202ENST00000338179 TMEM132AQ24JP5 1023 aa6.12□□□□□ -1.43
LBR-202ENST00000338179 BBXQ8WY36 941 aaPredicted RBP6.12□□□□□ -1.43
LBR-202ENST00000338179 SMARCA4P51532 1647 aa6.11□□□□□ -1.43
LBR-202ENST00000338179 MSH5O43196 834 aa6.11□□□□□ -1.43
LBR-202ENST00000338179 DMRT2Q9Y5R5 561 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms