RNA–Protein interactions for RNA: ENST00000492724.1

FUBP1-213, Transcript of far upstream element binding protein 1, humanhuman

TSL 3

Gene FUBP1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-213ENST00000492724 NISCHQ9Y2I1 1504 aa34.1■■■■□ 3.05
FUBP1-213ENST00000492724 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
FUBP1-213ENST00000492724 ABCC9O60706 1549 aa29.92■■■□□ 2.38
FUBP1-213ENST00000492724 RB1CC1Q8TDY2 1594 aa28.68■■■□□ 2.18
FUBP1-213ENST00000492724 NACADO15069 1562 aa28.62■■■□□ 2.17
FUBP1-213ENST00000492724 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
FUBP1-213ENST00000492724 MYO15BQ96JP2 1530 aa28.41■■■□□ 2.14
FUBP1-213ENST00000492724 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
FUBP1-213ENST00000492724 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
FUBP1-213ENST00000492724 PABPN1Q86U42 306 aaKnown RBP eCLIP27.97■■■□□ 2.07
FUBP1-213ENST00000492724 UNC13AQ9UPW8 1703 aa27.95■■■□□ 2.07
FUBP1-213ENST00000492724 BICRAQ9NZM4 1560 aa27.84■■■□□ 2.05
FUBP1-213ENST00000492724 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
FUBP1-213ENST00000492724 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
FUBP1-213ENST00000492724 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
FUBP1-213ENST00000492724 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
FUBP1-213ENST00000492724 CC2D2AQ9P2K1 1620 aa27.04■■□□□ 1.92
FUBP1-213ENST00000492724 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
FUBP1-213ENST00000492724 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
FUBP1-213ENST00000492724 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
FUBP1-213ENST00000492724 BAZ1AQ9NRL2 1556 aaPredicted RBP26.42■■□□□ 1.82
FUBP1-213ENST00000492724 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
FUBP1-213ENST00000492724 SMARCA2P51531 1590 aa26.35■■□□□ 1.81
FUBP1-213ENST00000492724 MROH2BQ7Z745 1585 aa26.28■■□□□ 1.8
FUBP1-213ENST00000492724 HMGXB3Q12766 1538 aa26.26■■□□□ 1.79
FUBP1-213ENST00000492724 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
FUBP1-213ENST00000492724 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
FUBP1-213ENST00000492724 WIZO95785 1651 aa25.94■■□□□ 1.74
FUBP1-213ENST00000492724 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
FUBP1-213ENST00000492724 NESP48681 1621 aa25.85■■□□□ 1.73
FUBP1-213ENST00000492724 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
FUBP1-213ENST00000492724 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
FUBP1-213ENST00000492724 CADPSQ9ULU8 1353 aa25.68■■□□□ 1.7
FUBP1-213ENST00000492724 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
FUBP1-213ENST00000492724 CUX2O14529 1486 aa25.61■■□□□ 1.69
FUBP1-213ENST00000492724 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
FUBP1-213ENST00000492724 CFTRP13569 1480 aa25.47■■□□□ 1.67
FUBP1-213ENST00000492724 KIF21AQ7Z4S6 1674 aa25.46■■□□□ 1.67
FUBP1-213ENST00000492724 THOC2Q8NI27 1593 aaKnown RBP25.46■■□□□ 1.67
FUBP1-213ENST00000492724 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
FUBP1-213ENST00000492724 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
FUBP1-213ENST00000492724 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
FUBP1-213ENST00000492724 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
FUBP1-213ENST00000492724 WDR62O43379 1518 aa25.25■■□□□ 1.63
FUBP1-213ENST00000492724 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
FUBP1-213ENST00000492724 SUPT5HO00267 1087 aaKnown RBP25.11■■□□□ 1.61
FUBP1-213ENST00000492724 DNAJC5Q9H3Z4 198 aa25.11■■□□□ 1.61
FUBP1-213ENST00000492724 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
FUBP1-213ENST00000492724 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
FUBP1-213ENST00000492724 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
FUBP1-213ENST00000492724 DNMBPQ6XZF7 1577 aa24.85■■□□□ 1.57
FUBP1-213ENST00000492724 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
FUBP1-213ENST00000492724 ZNF608Q9ULD9 1512 aaPredicted RBP24.72■■□□□ 1.55
FUBP1-213ENST00000492724 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.54
FUBP1-213ENST00000492724 CUX1P39880 1505 aa24.66■■□□□ 1.54
FUBP1-213ENST00000492724 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.53
FUBP1-213ENST00000492724 SOGA1O94964 1423 aa24.61■■□□□ 1.53
FUBP1-213ENST00000492724 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
FUBP1-213ENST00000492724 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
FUBP1-213ENST00000492724 AQRO60306 1485 aaKnown RBP eCLIP24.57■■□□□ 1.526e-17■■■■□ 19.6
FUBP1-213ENST00000492724 EIF4G3O43432 1585 aaKnown RBP24.56■■□□□ 1.52
FUBP1-213ENST00000492724 OSCARQ8IYS5 282 aa24.56■■□□□ 1.52
FUBP1-213ENST00000492724 TDRD9Q8NDG6 1382 aaKnown RBP24.5■■□□□ 1.51
FUBP1-213ENST00000492724 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
FUBP1-213ENST00000492724 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
FUBP1-213ENST00000492724 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
FUBP1-213ENST00000492724 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
FUBP1-213ENST00000492724 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
FUBP1-213ENST00000492724 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
FUBP1-213ENST00000492724 GRIN2BQ13224 1484 aa24.33■■□□□ 1.49
FUBP1-213ENST00000492724 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
FUBP1-213ENST00000492724 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
FUBP1-213ENST00000492724 FBLN2P98095 1184 aa24.3■■□□□ 1.48
FUBP1-213ENST00000492724 MAGI1Q96QZ7 1491 aaPredicted RBP24.28■■□□□ 1.48
FUBP1-213ENST00000492724 CHD1O14646 1710 aa24.26■■□□□ 1.47
FUBP1-213ENST00000492724 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
FUBP1-213ENST00000492724 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
FUBP1-213ENST00000492724 SYNJ2O15056 1496 aa24.19■■□□□ 1.46
FUBP1-213ENST00000492724 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
FUBP1-213ENST00000492724 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
FUBP1-213ENST00000492724 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
FUBP1-213ENST00000492724 RIMBP3CA6NJZ7 1639 aa24.11■■□□□ 1.45
FUBP1-213ENST00000492724 RIMBP3BA6NNM3 1639 aa24.11■■□□□ 1.45
FUBP1-213ENST00000492724 RIMBP3Q9UFD9 1639 aa24.11■■□□□ 1.45
FUBP1-213ENST00000492724 CLASP1Q7Z460 1538 aa24.06■■□□□ 1.44
FUBP1-213ENST00000492724 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
FUBP1-213ENST00000492724 ADAMTS12P58397 1594 aa24.03■■□□□ 1.44
FUBP1-213ENST00000492724 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
FUBP1-213ENST00000492724 GRIN2AQ12879 1464 aa24■■□□□ 1.43
FUBP1-213ENST00000492724 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
FUBP1-213ENST00000492724 NUP160Q12769 1436 aa23.93■■□□□ 1.42
FUBP1-213ENST00000492724 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
FUBP1-213ENST00000492724 ARAP1Q96P48 1450 aa23.92■■□□□ 1.42
FUBP1-213ENST00000492724 IGF1RP08069 1367 aa23.91■■□□□ 1.42
FUBP1-213ENST00000492724 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
FUBP1-213ENST00000492724 CUL7Q14999 1698 aa23.76■■□□□ 1.39
FUBP1-213ENST00000492724 CARMIL1Q5VZK9 1371 aa23.74■■□□□ 1.39
FUBP1-213ENST00000492724 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
FUBP1-213ENST00000492724 ERCC6L2Q5T890 1561 aa23.71■■□□□ 1.39
FUBP1-213ENST00000492724 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms