RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
DSP-202ENST00000418664 ERICH6Q7L0X2 663 aa19.47■□□□□ 0.71
DSP-202ENST00000418664 MYT1Q01538 1121 aa19.44■□□□□ 0.7
DSP-202ENST00000418664 DCAF8L2P0C7V8 631 aa19.22■□□□□ 0.67
DSP-202ENST00000418664 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
DSP-202ENST00000418664 EHMT2Q96KQ7 1210 aa18.58■□□□□ 0.57
DSP-202ENST00000418664 TTBK1Q5TCY1 1321 aaPredicted RBP18.35■□□□□ 0.53
DSP-202ENST00000418664 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
DSP-202ENST00000418664 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.51
DSP-202ENST00000418664 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
DSP-202ENST00000418664 NEFLP07196 543 aa18.12■□□□□ 0.49
DSP-202ENST00000418664 APLP2Q06481 763 aa18.01■□□□□ 0.47
DSP-202ENST00000418664 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
DSP-202ENST00000418664 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.44
DSP-202ENST00000418664 PCGF6Q9BYE7 350 aa17.75■□□□□ 0.43
DSP-202ENST00000418664 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
DSP-202ENST00000418664 RANGAP1P46060 587 aaPredicted RBP17.7■□□□□ 0.42
DSP-202ENST00000418664 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
DSP-202ENST00000418664 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
DSP-202ENST00000418664 EIF5BO60841 1220 aaKnown RBP17.5■□□□□ 0.39
DSP-202ENST00000418664 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
DSP-202ENST00000418664 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
DSP-202ENST00000418664 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
DSP-202ENST00000418664 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
DSP-202ENST00000418664 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
DSP-202ENST00000418664 GLIPR1L2Q4G1C9 344 aa17.26■□□□□ 0.35
DSP-202ENST00000418664 ZEB1P37275 1124 aaPredicted RBP17.24■□□□□ 0.35
DSP-202ENST00000418664 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
DSP-202ENST00000418664 BCL11AQ9H165 835 aa17.15■□□□□ 0.34
DSP-202ENST00000418664 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
DSP-202ENST00000418664 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
DSP-202ENST00000418664 ZBTB47Q9UFB7 747 aaPredicted RBP16.88■□□□□ 0.29
DSP-202ENST00000418664 BCANQ96GW7 911 aa16.86■□□□□ 0.29
DSP-202ENST00000418664 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
DSP-202ENST00000418664 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.28
DSP-202ENST00000418664 CDK11AQ9UQ88 783 aaPredicted RBP16.7■□□□□ 0.26
DSP-202ENST00000418664 ARXQ96QS3 562 aa16.67■□□□□ 0.26
DSP-202ENST00000418664 PPARGC1BQ86YN6 1023 aaKnown RBP16.64■□□□□ 0.26
DSP-202ENST00000418664 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
DSP-202ENST00000418664 CDK11BP21127 795 aaKnown RBP16.64■□□□□ 0.25
DSP-202ENST00000418664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
DSP-202ENST00000418664 ITGAEP38570 1179 aa16.63■□□□□ 0.25
DSP-202ENST00000418664 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
DSP-202ENST00000418664 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
DSP-202ENST00000418664 TNNT2P45379 298 aaPredicted RBP16.59■□□□□ 0.25
DSP-202ENST00000418664 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
DSP-202ENST00000418664 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
DSP-202ENST00000418664 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
DSP-202ENST00000418664 HRCP23327 699 aa16.5■□□□□ 0.23
DSP-202ENST00000418664 HSP90AA1P07900 732 aaKnown RBP16.49■□□□□ 0.23
DSP-202ENST00000418664 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
DSP-202ENST00000418664 NBR1Q14596 966 aa16.46■□□□□ 0.22
DSP-202ENST00000418664 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
DSP-202ENST00000418664 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
DSP-202ENST00000418664 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
DSP-202ENST00000418664 NEFMP07197 916 aa16.22■□□□□ 0.19
DSP-202ENST00000418664 TRIM44Q96DX7 344 aaPredicted RBP16.17■□□□□ 0.18
DSP-202ENST00000418664 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
DSP-202ENST00000418664 DNTTIP2Q5QJE6 756 aaKnown RBP16.16■□□□□ 0.18
DSP-202ENST00000418664 NAP1L5Q96NT1 182 aaPredicted RBP16.15■□□□□ 0.18
DSP-202ENST00000418664 RTN4Q9NQC3 1192 aaKnown RBP16.14■□□□□ 0.17
DSP-202ENST00000418664 UPF2Q9HAU5 1272 aaKnown RBP16.12■□□□□ 0.17
DSP-202ENST00000418664 A0A0G2JS52 829 aa16.11■□□□□ 0.17
DSP-202ENST00000418664 TRIM26Q12899 539 aaPredicted RBP16.08■□□□□ 0.17
DSP-202ENST00000418664 CALRP27797 417 aaKnown RBP16.07■□□□□ 0.16
DSP-202ENST00000418664 PTMAP06454 111 aaKnown RBP16.03■□□□□ 0.16
DSP-202ENST00000418664 TPRNQ4KMQ1 711 aa16.03■□□□□ 0.16
DSP-202ENST00000418664 PRM3Q9NNZ6 103 aa16.02■□□□□ 0.16
DSP-202ENST00000418664 ANP32CO43423 234 aa16.01■□□□□ 0.15
DSP-202ENST00000418664 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
DSP-202ENST00000418664 TRIM52Q96A61 297 aa15.98■□□□□ 0.15
DSP-202ENST00000418664 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
DSP-202ENST00000418664 NEUROD1Q13562 356 aa15.94■□□□□ 0.14
DSP-202ENST00000418664 TNNT3P45378 269 aaPredicted RBP15.94■□□□□ 0.14
DSP-202ENST00000418664 NCLP19338 710 aaKnown RBP15.93■□□□□ 0.14
DSP-202ENST00000418664 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
DSP-202ENST00000418664 CLSTN1O94985 981 aa15.91■□□□□ 0.14
DSP-202ENST00000418664 TAOK2Q9UL54 1235 aa15.9■□□□□ 0.14
DSP-202ENST00000418664 FKBP8Q14318 412 aa15.88■□□□□ 0.13
DSP-202ENST00000418664 ARID3AQ99856 593 aa15.88■□□□□ 0.13
DSP-202ENST00000418664 ZRSR1Q15695 479 aaKnown RBP15.85■□□□□ 0.13
DSP-202ENST00000418664 PLCB2Q00722 1185 aa15.83■□□□□ 0.12
DSP-202ENST00000418664 FAM50AQ14320 339 aaKnown RBP15.83■□□□□ 0.12
DSP-202ENST00000418664 ERICH6BQ5W0A0 696 aa15.79■□□□□ 0.12
DSP-202ENST00000418664 PLEKHG5O94827 1062 aa15.77■□□□□ 0.12
DSP-202ENST00000418664 FBXO3Q9UK99 471 aa15.76■□□□□ 0.11
DSP-202ENST00000418664 ZBTB7CA1YPR0 619 aa15.75■□□□□ 0.11
DSP-202ENST00000418664 ACIN1Q9UKV3 1341 aaKnown RBP15.73■□□□□ 0.11
DSP-202ENST00000418664 GOLGA6L22H0YM25 854 aa15.71■□□□□ 0.11
DSP-202ENST00000418664 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.71■□□□□ 0.11
DSP-202ENST00000418664 SALL2Q9Y467 1007 aaPredicted RBP15.71■□□□□ 0.11
DSP-202ENST00000418664 CCDC136Q96JN2 1154 aa15.66■□□□□ 0.1
DSP-202ENST00000418664 PDE4CQ08493 712 aa15.66■□□□□ 0.1
DSP-202ENST00000418664 CHAF1AQ13111 956 aaPredicted RBP15.65■□□□□ 0.1
DSP-202ENST00000418664 KRI1Q8N9T8 703 aaKnown RBP15.65■□□□□ 0.1
DSP-202ENST00000418664 ANP32EQ9BTT0 268 aa15.65■□□□□ 0.1
DSP-202ENST00000418664 GOLGA6L6A8MZA4 724 aa15.65■□□□□ 0.1
DSP-202ENST00000418664 NOC3LQ8WTT2 800 aaKnown RBP15.64■□□□□ 0.09
DSP-202ENST00000418664 BECN1Q14457 450 aa15.62■□□□□ 0.09
DSP-202ENST00000418664 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms