RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
CHERP-203ENST00000546361 NISCHQ9Y2I1 1504 aa21.43■■□□□ 1.02
CHERP-203ENST00000546361 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
CHERP-203ENST00000546361 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
CHERP-203ENST00000546361 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
CHERP-203ENST00000546361 FAM9AQ8IZU1 332 aaPredicted RBP18.93■□□□□ 0.62
CHERP-203ENST00000546361 APLP2Q06481 763 aa18.81■□□□□ 0.6
CHERP-203ENST00000546361 TRIM41Q8WV44 630 aa18.64■□□□□ 0.58
CHERP-203ENST00000546361 RANGAP1P46060 587 aaPredicted RBP18.59■□□□□ 0.57
CHERP-203ENST00000546361 TTBK1Q5TCY1 1321 aaPredicted RBP18.53■□□□□ 0.56
CHERP-203ENST00000546361 ABCC9O60706 1549 aa18.44■□□□□ 0.54
CHERP-203ENST00000546361 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.54
CHERP-203ENST00000546361 ATP1B4Q9UN42 357 aaPredicted RBP18.39■□□□□ 0.54
CHERP-203ENST00000546361 PCGF6Q9BYE7 350 aa18.25■□□□□ 0.51
CHERP-203ENST00000546361 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHERP-203ENST00000546361 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
CHERP-203ENST00000546361 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
CHERP-203ENST00000546361 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
CHERP-203ENST00000546361 PPARGC1BQ86YN6 1023 aaKnown RBP17.94■□□□□ 0.46
CHERP-203ENST00000546361 CHIC1Q5VXU3 224 aa17.9■□□□□ 0.46
CHERP-203ENST00000546361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
CHERP-203ENST00000546361 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
CHERP-203ENST00000546361 LOC105371045A0A1W2PR82 267 aa17.83■□□□□ 0.44
CHERP-203ENST00000546361 ZEB1P37275 1124 aaPredicted RBP17.73■□□□□ 0.43
CHERP-203ENST00000546361 MYT1LQ9UL68 1186 aa17.72■□□□□ 0.43
CHERP-203ENST00000546361 ITGAEP38570 1179 aa17.7■□□□□ 0.42
CHERP-203ENST00000546361 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
CHERP-203ENST00000546361 TRIM26Q12899 539 aaPredicted RBP17.58■□□□□ 0.4
CHERP-203ENST00000546361 FBLN2P98095 1184 aa17.5■□□□□ 0.39
CHERP-203ENST00000546361 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
CHERP-203ENST00000546361 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
CHERP-203ENST00000546361 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
CHERP-203ENST00000546361 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
CHERP-203ENST00000546361 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
CHERP-203ENST00000546361 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
CHERP-203ENST00000546361 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
CHERP-203ENST00000546361 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
CHERP-203ENST00000546361 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
CHERP-203ENST00000546361 NACADO15069 1562 aa17.17■□□□□ 0.34
CHERP-203ENST00000546361 ARID3CA6NKF2 412 aa17.15■□□□□ 0.34
CHERP-203ENST00000546361 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
CHERP-203ENST00000546361 CNGB1Q14028 1251 aaPredicted RBP17.14■□□□□ 0.33
CHERP-203ENST00000546361 HRCP23327 699 aa17.12■□□□□ 0.33
CHERP-203ENST00000546361 NEFLP07196 543 aa17.1■□□□□ 0.33
CHERP-203ENST00000546361 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
CHERP-203ENST00000546361 SLC4A1APQ9BWU0 796 aaKnown RBP17.03■□□□□ 0.32
CHERP-203ENST00000546361 NEUROD1Q13562 356 aa16.99■□□□□ 0.31
CHERP-203ENST00000546361 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
CHERP-203ENST00000546361 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
CHERP-203ENST00000546361 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
CHERP-203ENST00000546361 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHERP-203ENST00000546361 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
CHERP-203ENST00000546361 ERICH6Q7L0X2 663 aa16.85■□□□□ 0.29
CHERP-203ENST00000546361 CHMP7Q8WUX9 453 aaPredicted RBP16.84■□□□□ 0.29
CHERP-203ENST00000546361 CECR2Q9BXF3 1484 aa16.79■□□□□ 0.28
CHERP-203ENST00000546361 DIEXFQ68CQ4 756 aaKnown RBP16.74■□□□□ 0.27
CHERP-203ENST00000546361 BCANQ96GW7 911 aa16.74■□□□□ 0.27
CHERP-203ENST00000546361 ESF1Q9H501 851 aaKnown RBP16.72■□□□□ 0.27
CHERP-203ENST00000546361 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
CHERP-203ENST00000546361 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
CHERP-203ENST00000546361 CHIC2Q9UKJ5 165 aa16.61■□□□□ 0.25
CHERP-203ENST00000546361 CHGAP10645 457 aaKnown RBP16.6■□□□□ 0.25
CHERP-203ENST00000546361 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
CHERP-203ENST00000546361 MYT1Q01538 1121 aa16.59■□□□□ 0.25
CHERP-203ENST00000546361 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
CHERP-203ENST00000546361 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
CHERP-203ENST00000546361 BAZ1AQ9NRL2 1556 aaPredicted RBP16.59■□□□□ 0.25
CHERP-203ENST00000546361 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
CHERP-203ENST00000546361 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
CHERP-203ENST00000546361 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
CHERP-203ENST00000546361 ANP32CO43423 234 aa16.56■□□□□ 0.24
CHERP-203ENST00000546361 KCNH8Q96L42 1107 aa16.55■□□□□ 0.24
CHERP-203ENST00000546361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
CHERP-203ENST00000546361 CLIP1P30622 1438 aa16.53■□□□□ 0.24
CHERP-203ENST00000546361 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
CHERP-203ENST00000546361 PLEKHD1A6NEE1 506 aa16.5■□□□□ 0.23
CHERP-203ENST00000546361 ZNF316A6NFI3 1004 aaPredicted RBP16.49■□□□□ 0.23
CHERP-203ENST00000546361 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
CHERP-203ENST00000546361 EEA1Q15075 1411 aa16.47■□□□□ 0.23
CHERP-203ENST00000546361 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
CHERP-203ENST00000546361 WIZO95785 1651 aa16.46■□□□□ 0.23
CHERP-203ENST00000546361 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
CHERP-203ENST00000546361 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
CHERP-203ENST00000546361 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
CHERP-203ENST00000546361 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
CHERP-203ENST00000546361 NEFMP07197 916 aa16.38■□□□□ 0.21
CHERP-203ENST00000546361 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
CHERP-203ENST00000546361 RRP7BPQ9NSQ0 103 aa16.37■□□□□ 0.21
CHERP-203ENST00000546361 SMARCA4P51532 1647 aa16.35■□□□□ 0.21
CHERP-203ENST00000546361 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
CHERP-203ENST00000546361 CFDP1Q9UEE9 299 aaPredicted RBP16.33■□□□□ 0.2
CHERP-203ENST00000546361 CEP162Q5TB80 1403 aa16.33■□□□□ 0.2
CHERP-203ENST00000546361 CARMIL1Q5VZK9 1371 aa16.27■□□□□ 0.2
CHERP-203ENST00000546361 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
CHERP-203ENST00000546361 CUX2O14529 1486 aa16.27■□□□□ 0.19
CHERP-203ENST00000546361 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.19
CHERP-203ENST00000546361 TNIKQ9UKE5 1360 aa16.27■□□□□ 0.19
CHERP-203ENST00000546361 TOP2AP11388 1531 aaKnown RBP16.26■□□□□ 0.19
CHERP-203ENST00000546361 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
CHERP-203ENST00000546361 BICRAQ9NZM4 1560 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms