RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 MYT1Q01538 1121 aa12.9□□□□□ -0.34
LIN7C-202ENST00000524596 PELP1Q8IZL8 1130 aaKnown RBP12.68□□□□□ -0.38
LIN7C-202ENST00000524596 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
LIN7C-202ENST00000524596 SLC24A1O60721 1099 aa12.11□□□□□ -0.47
LIN7C-202ENST00000524596 ERICH6Q7L0X2 663 aa12.05□□□□□ -0.48
LIN7C-202ENST00000524596 RANGAP1P46060 587 aaPredicted RBP11.38□□□□□ -0.59
LIN7C-202ENST00000524596 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
LIN7C-202ENST00000524596 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
LIN7C-202ENST00000524596 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
LIN7C-202ENST00000524596 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
LIN7C-202ENST00000524596 CENPBP07199 599 aaPredicted RBP11□□□□□ -0.65
LIN7C-202ENST00000524596 APLP2Q06481 763 aa10.94□□□□□ -0.66
LIN7C-202ENST00000524596 BCL11AQ9H165 835 aa10.84□□□□□ -0.67
LIN7C-202ENST00000524596 NCBP3Q53F19 620 aaKnown RBP10.64□□□□□ -0.71
LIN7C-202ENST00000524596 GLIPR1L2Q4G1C9 344 aa10.56□□□□□ -0.72
LIN7C-202ENST00000524596 NEFLP07196 543 aa10.55□□□□□ -0.72
LIN7C-202ENST00000524596 ARXQ96QS3 562 aa10.52□□□□□ -0.73
LIN7C-202ENST00000524596 PODXL2Q9NZ53 605 aa10.52□□□□□ -0.73
LIN7C-202ENST00000524596 YTHDC1Q96MU7 727 aaKnown RBP10.51□□□□□ -0.73
LIN7C-202ENST00000524596 DCAF8L2P0C7V8 631 aa10.51□□□□□ -0.73
LIN7C-202ENST00000524596 HOMEZQ8IX15 550 aa10.47□□□□□ -0.73
LIN7C-202ENST00000524596 RTN4Q9NQC3 1192 aaKnown RBP10.45□□□□□ -0.74
LIN7C-202ENST00000524596 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
LIN7C-202ENST00000524596 CCER1Q8TC90 406 aaPredicted RBP10.4□□□□□ -0.75
LIN7C-202ENST00000524596 HRCP23327 699 aa10.38□□□□□ -0.75
LIN7C-202ENST00000524596 TULP1O00294 542 aaPredicted RBP10.33□□□□□ -0.76
LIN7C-202ENST00000524596 FAM9AQ8IZU1 332 aaPredicted RBP10.32□□□□□ -0.76
LIN7C-202ENST00000524596 MYT1LQ9UL68 1186 aa10.3□□□□□ -0.76
LIN7C-202ENST00000524596 PLPPR3Q6T4P5 718 aa10.29□□□□□ -0.76
LIN7C-202ENST00000524596 POLR3GLQ9BT43 218 aa10.29□□□□□ -0.76
LIN7C-202ENST00000524596 CLSPNQ9HAW4 1339 aa10.27□□□□□ -0.77
LIN7C-202ENST00000524596 ANP32EQ9BTT0 268 aa10.23□□□□□ -0.77
LIN7C-202ENST00000524596 PKNOX2Q96KN3 472 aa10.23□□□□□ -0.77
LIN7C-202ENST00000524596 C14orf37Q86TY3 774 aa10.22□□□□□ -0.77
LIN7C-202ENST00000524596 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
LIN7C-202ENST00000524596 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
LIN7C-202ENST00000524596 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
LIN7C-202ENST00000524596 PDE4CQ08493 712 aa10.15□□□□□ -0.78
LIN7C-202ENST00000524596 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
LIN7C-202ENST00000524596 CDK11BP21127 795 aaKnown RBP10.13□□□□□ -0.79
LIN7C-202ENST00000524596 CDK11AQ9UQ88 783 aaPredicted RBP10.13□□□□□ -0.79
LIN7C-202ENST00000524596 SCAF1Q9H7N4 1312 aaKnown RBP10.13□□□□□ -0.79
LIN7C-202ENST00000524596 PDIA4P13667 645 aaKnown RBP10.12□□□□□ -0.79
LIN7C-202ENST00000524596 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
LIN7C-202ENST00000524596 UBE2Q2Q8WVN8 375 aa10.11□□□□□ -0.79
LIN7C-202ENST00000524596 RTL5Q5HYW3 569 aaPredicted RBP10.1□□□□□ -0.79
LIN7C-202ENST00000524596 KLHL34Q8N239 644 aa10.08□□□□□ -0.8
LIN7C-202ENST00000524596 BCANQ96GW7 911 aa10.07□□□□□ -0.8
LIN7C-202ENST00000524596 GTF3C3Q9Y5Q9 886 aa10.06□□□□□ -0.8
LIN7C-202ENST00000524596 TPRNQ4KMQ1 711 aa10.06□□□□□ -0.8
LIN7C-202ENST00000524596 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
LIN7C-202ENST00000524596 ACIN1Q9UKV3 1341 aaKnown RBP10.02□□□□□ -0.81
LIN7C-202ENST00000524596 ERICH6BQ5W0A0 696 aa10□□□□□ -0.81
LIN7C-202ENST00000524596 HMGB1P09429 215 aaKnown RBP10□□□□□ -0.81
LIN7C-202ENST00000524596 TAF7LQ5H9L4 462 aa9.96□□□□□ -0.82
LIN7C-202ENST00000524596 TAOK2Q9UL54 1235 aa9.93□□□□□ -0.82
LIN7C-202ENST00000524596 A0A0U1RQG5 324 aaPredicted RBP9.92□□□□□ -0.82
LIN7C-202ENST00000524596 NAP1L5Q96NT1 182 aaPredicted RBP9.9□□□□□ -0.82
LIN7C-202ENST00000524596 PCGF6Q9BYE7 350 aa9.88□□□□□ -0.83
LIN7C-202ENST00000524596 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
LIN7C-202ENST00000524596 BRD2P25440 801 aaKnown RBP9.86□□□□□ -0.83
LIN7C-202ENST00000524596 NCLP19338 710 aaKnown RBP9.85□□□□□ -0.83
LIN7C-202ENST00000524596 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
LIN7C-202ENST00000524596 CSRNP3Q8WYN3 585 aa9.83□□□□□ -0.84
LIN7C-202ENST00000524596 HSP90B1P14625 803 aaKnown RBP9.82□□□□□ -0.84
LIN7C-202ENST00000524596 PTMSP20962 102 aa9.81□□□□□ -0.84
LIN7C-202ENST00000524596 PPARGC1BQ86YN6 1023 aaKnown RBP9.77□□□□□ -0.84
LIN7C-202ENST00000524596 CCDC136Q96JN2 1154 aa9.76□□□□□ -0.85
LIN7C-202ENST00000524596 VSIG10Q8N0Z9 540 aa9.74□□□□□ -0.85
LIN7C-202ENST00000524596 SUPT5HO00267 1087 aaKnown RBP9.74□□□□□ -0.85
LIN7C-202ENST00000524596 DEKP35659 375 aaKnown RBP9.73□□□□□ -0.85
LIN7C-202ENST00000524596 CCDC9Q9Y3X0 531 aaKnown RBP9.71□□□□□ -0.85
LIN7C-202ENST00000524596 KCNA4P22459 653 aa9.69□□□□□ -0.86
LIN7C-202ENST00000524596 ZNF316A6NFI3 1004 aaPredicted RBP9.69□□□□□ -0.86
LIN7C-202ENST00000524596 CHMP4AQ9BY43 222 aa9.69□□□□□ -0.86
LIN7C-202ENST00000524596 CNGB1Q14028 1251 aaPredicted RBP9.68□□□□□ -0.86
LIN7C-202ENST00000524596 BCL11BQ9C0K0 894 aaPredicted RBP9.68□□□□□ -0.86
LIN7C-202ENST00000524596 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.68□□□□□ -0.86
LIN7C-202ENST00000524596 TNNT2P45379 298 aaPredicted RBP9.65□□□□□ -0.86
LIN7C-202ENST00000524596 CHIC1Q5VXU3 224 aa9.64□□□□□ -0.87
LIN7C-202ENST00000524596 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
LIN7C-202ENST00000524596 NEUROD1Q13562 356 aa9.63□□□□□ -0.87
LIN7C-202ENST00000524596 ARID4BQ4LE39 1312 aaPredicted RBP9.63□□□□□ -0.87
LIN7C-202ENST00000524596 FGD1P98174 961 aa9.6□□□□□ -0.87
LIN7C-202ENST00000524596 SALL2Q9Y467 1007 aaPredicted RBP9.58□□□□□ -0.88
LIN7C-202ENST00000524596 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
LIN7C-202ENST00000524596 BCCIPQ9P287 314 aaKnown RBP eCLIP9.57□□□□□ -0.88
LIN7C-202ENST00000524596 RSPH6AQ9H0K4 717 aa9.57□□□□□ -0.88
LIN7C-202ENST00000524596 PTMAP06454 111 aaKnown RBP9.54□□□□□ -0.88
LIN7C-202ENST00000524596 CANXP27824 592 aaKnown RBP9.54□□□□□ -0.88
LIN7C-202ENST00000524596 ANP32BQ92688 251 aaKnown RBP9.53□□□□□ -0.88
LIN7C-202ENST00000524596 APPP05067 770 aa9.52□□□□□ -0.89
LIN7C-202ENST00000524596 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
LIN7C-202ENST00000524596 SHROOM4Q9ULL8 1493 aa9.5□□□□□ -0.89
LIN7C-202ENST00000524596 RBM10P98175 930 aaKnown RBP9.5□□□□□ -0.89
LIN7C-202ENST00000524596 PSMD1Q99460 953 aa9.49□□□□□ -0.89
LIN7C-202ENST00000524596 TRIM44Q96DX7 344 aaPredicted RBP9.49□□□□□ -0.89
LIN7C-202ENST00000524596 ZMYND15Q9H091 742 aa9.48□□□□□ -0.89
LIN7C-202ENST00000524596 HSP90AA2PQ14568 343 aaPredicted RBP9.46□□□□□ -0.89
LIN7C-202ENST00000524596 DIEXFQ68CQ4 756 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms