RNA–Protein interactions for RNA: ENST00000338086.9

PUM2-202, Transcript of pumilio RNA binding family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM2, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM2-202ENST00000338086 NISCHQ9Y2I1 1504 aa10.09□□□□□ -0.79
PUM2-202ENST00000338086 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
PUM2-202ENST00000338086 SUPT5HO00267 1087 aaKnown RBP9.94□□□□□ -0.82
PUM2-202ENST00000338086 SHROOM4Q9ULL8 1493 aa9.77□□□□□ -0.84
PUM2-202ENST00000338086 PELP1Q8IZL8 1130 aaKnown RBP9.71□□□□□ -0.86
PUM2-202ENST00000338086 PCGF6Q9BYE7 350 aa9.62□□□□□ -0.87
PUM2-202ENST00000338086 MYT1Q01538 1121 aa9.54□□□□□ -0.88
PUM2-202ENST00000338086 EHMT2Q96KQ7 1210 aa9.54□□□□□ -0.88
PUM2-202ENST00000338086 ZEB1P37275 1124 aaPredicted RBP9.52□□□□□ -0.89
PUM2-202ENST00000338086 CENPBP07199 599 aaPredicted RBP9.49□□□□□ -0.89
PUM2-202ENST00000338086 HRCP23327 699 aa9.38□□□□□ -0.91
PUM2-202ENST00000338086 FAM9AQ8IZU1 332 aaPredicted RBP9.33□□□□□ -0.92
PUM2-202ENST00000338086 APLP2Q06481 763 aa9.33□□□□□ -0.92
PUM2-202ENST00000338086 CCER1Q8TC90 406 aaPredicted RBP9.32□□□□□ -0.92
PUM2-202ENST00000338086 ERICH6Q7L0X2 663 aa9.32□□□□□ -0.92
PUM2-202ENST00000338086 TTBK1Q5TCY1 1321 aaPredicted RBP9.29□□□□□ -0.92
PUM2-202ENST00000338086 TRIM26Q12899 539 aaPredicted RBP9.24□□□□□ -0.93
PUM2-202ENST00000338086 YTHDC1Q96MU7 727 aaKnown RBP9.23□□□□□ -0.93
PUM2-202ENST00000338086 TRIM41Q8WV44 630 aa9.21□□□□□ -0.93
PUM2-202ENST00000338086 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.94
PUM2-202ENST00000338086 NEFLP07196 543 aa9.13□□□□□ -0.95
PUM2-202ENST00000338086 CHIC1Q5VXU3 224 aa9.04□□□□□ -0.96
PUM2-202ENST00000338086 RANGAP1P46060 587 aaPredicted RBP9.02□□□□□ -0.97
PUM2-202ENST00000338086 UBTFP17480 764 aaKnown RBP9.01□□□□□ -0.97
PUM2-202ENST00000338086 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
PUM2-202ENST00000338086 DIEXFQ68CQ4 756 aaKnown RBP8.96□□□□□ -0.98
PUM2-202ENST00000338086 GTF3C3Q9Y5Q9 886 aa8.91□□□□□ -0.98
PUM2-202ENST00000338086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.88□□□□□ -0.99
PUM2-202ENST00000338086 ATP1B4Q9UN42 357 aaPredicted RBP8.87□□□□□ -0.99
PUM2-202ENST00000338086 ACIN1Q9UKV3 1341 aaKnown RBP8.84□□□□□ -1
PUM2-202ENST00000338086 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
PUM2-202ENST00000338086 DAXXQ9UER7 740 aaPredicted RBP8.79□□□□□ -1
PUM2-202ENST00000338086 RTL5Q5HYW3 569 aaPredicted RBP8.76□□□□□ -1.01
PUM2-202ENST00000338086 ITGAEP38570 1179 aa8.75□□□□□ -1.01
PUM2-202ENST00000338086 DCAF1Q9Y4B6 1507 aa8.73□□□□□ -1.01
PUM2-202ENST00000338086 ZNF316A6NFI3 1004 aaPredicted RBP8.73□□□□□ -1.01
PUM2-202ENST00000338086 BCANQ96GW7 911 aa8.72□□□□□ -1.01
PUM2-202ENST00000338086 SCAF1Q9H7N4 1312 aaKnown RBP8.68□□□□□ -1.02
PUM2-202ENST00000338086 CDK11AQ9UQ88 783 aaPredicted RBP8.66□□□□□ -1.02
PUM2-202ENST00000338086 POLR3GLQ9BT43 218 aa8.65□□□□□ -1.02
PUM2-202ENST00000338086 CLSPNQ9HAW4 1339 aa8.65□□□□□ -1.03
PUM2-202ENST00000338086 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
PUM2-202ENST00000338086 ANP32CO43423 234 aa8.6□□□□□ -1.03
PUM2-202ENST00000338086 CNGB1Q14028 1251 aaPredicted RBP8.58□□□□□ -1.04
PUM2-202ENST00000338086 FAM50AQ14320 339 aaKnown RBP8.55□□□□□ -1.04
PUM2-202ENST00000338086 CCDC180Q9P1Z9 1646 aa8.55□□□□□ -1.04
PUM2-202ENST00000338086 MYO15BQ96JP2 1530 aa8.54□□□□□ -1.04
PUM2-202ENST00000338086 FKBP8Q14318 412 aa8.51□□□□□ -1.05
PUM2-202ENST00000338086 ANP32AP39687 249 aaKnown RBP8.51□□□□□ -1.05
PUM2-202ENST00000338086 MYT1LQ9UL68 1186 aa8.5□□□□□ -1.05
PUM2-202ENST00000338086 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
PUM2-202ENST00000338086 ZCCHC6Q5VYS8 1495 aaKnown RBP8.44□□□□□ -1.06
PUM2-202ENST00000338086 MIER1Q8N108 512 aa8.42□□□□□ -1.06
PUM2-202ENST00000338086 ANP32EQ9BTT0 268 aa8.42□□□□□ -1.06
PUM2-202ENST00000338086 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
PUM2-202ENST00000338086 CSRNP3Q8WYN3 585 aa8.4□□□□□ -1.06
PUM2-202ENST00000338086 EIF5BO60841 1220 aaKnown RBP8.38□□□□□ -1.07
PUM2-202ENST00000338086 NBR1Q14596 966 aa8.37□□□□□ -1.07
PUM2-202ENST00000338086 HNRNPUQ00839 825 aaKnown RBP eCLIP8.36□□□□□ -1.07
PUM2-202ENST00000338086 SLC4A1APQ9BWU0 796 aaKnown RBP8.36□□□□□ -1.07
PUM2-202ENST00000338086 ZNF326Q5BKZ1 582 aaKnown RBP8.35□□□□□ -1.07
PUM2-202ENST00000338086 DDX10Q13206 875 aaKnown RBP8.35□□□□□ -1.07
PUM2-202ENST00000338086 GLIPR1L2Q4G1C9 344 aa8.33□□□□□ -1.08
PUM2-202ENST00000338086 ZBTB47Q9UFB7 747 aaPredicted RBP8.33□□□□□ -1.08
PUM2-202ENST00000338086 SCRIBQ14160 1630 aa8.32□□□□□ -1.08
PUM2-202ENST00000338086 TONSLQ96HA7 1378 aa8.32□□□□□ -1.08
PUM2-202ENST00000338086 CANXP27824 592 aaKnown RBP8.32□□□□□ -1.08
PUM2-202ENST00000338086 FAM9BQ8IZU0 186 aa8.29□□□□□ -1.08
PUM2-202ENST00000338086 CCDC136Q96JN2 1154 aa8.28□□□□□ -1.08
PUM2-202ENST00000338086 SUPT16HQ9Y5B9 1047 aaKnown RBP8.28□□□□□ -1.08
PUM2-202ENST00000338086 ABCC9O60706 1549 aa8.27□□□□□ -1.09
PUM2-202ENST00000338086 BCL11AQ9H165 835 aa8.27□□□□□ -1.09
PUM2-202ENST00000338086 IRX6P78412 446 aaPredicted RBP8.27□□□□□ -1.09
PUM2-202ENST00000338086 ANP32BQ92688 251 aaKnown RBP8.25□□□□□ -1.09
PUM2-202ENST00000338086 CEP162Q5TB80 1403 aa8.24□□□□□ -1.09
PUM2-202ENST00000338086 PABPN1Q86U42 306 aaKnown RBP eCLIP8.24□□□□□ -1.09
PUM2-202ENST00000338086 P3H3Q8IVL6 736 aa8.23□□□□□ -1.09
PUM2-202ENST00000338086 UPF2Q9HAU5 1272 aaKnown RBP8.22□□□□□ -1.09
PUM2-202ENST00000338086 CLIP1P30622 1438 aa8.22□□□□□ -1.09
PUM2-202ENST00000338086 GOLGA3Q08378 1498 aa8.21□□□□□ -1.1
PUM2-202ENST00000338086 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
PUM2-202ENST00000338086 MRS2Q9HD23 443 aa8.21□□□□□ -1.1
PUM2-202ENST00000338086 EEA1Q15075 1411 aa8.18□□□□□ -1.1
PUM2-202ENST00000338086 NOP58Q9Y2X3 529 aaKnown RBP8.17□□□□□ -1.1
PUM2-202ENST00000338086 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
PUM2-202ENST00000338086 HIRIP3Q9BW71 556 aaPredicted RBP8.17□□□□□ -1.1
PUM2-202ENST00000338086 HSP90AA1P07900 732 aaKnown RBP8.16□□□□□ -1.1
PUM2-202ENST00000338086 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.16□□□□□ -1.1
PUM2-202ENST00000338086 TNIKQ9UKE5 1360 aa8.16□□□□□ -1.1
PUM2-202ENST00000338086 RSF1Q96T23 1441 aaPredicted RBP8.15□□□□□ -1.1
PUM2-202ENST00000338086 ARXQ96QS3 562 aa8.15□□□□□ -1.1
PUM2-202ENST00000338086 SALL2Q9Y467 1007 aaPredicted RBP8.15□□□□□ -1.1
PUM2-202ENST00000338086 PPP4R2Q9NY27 417 aa8.15□□□□□ -1.11
PUM2-202ENST00000338086 PPM1GO15355 546 aaPredicted RBP8.13□□□□□ -1.11
PUM2-202ENST00000338086 RBM19Q9Y4C8 960 aaKnown RBP8.13□□□□□ -1.11
PUM2-202ENST00000338086 ARID3CA6NKF2 412 aa8.13□□□□□ -1.11
PUM2-202ENST00000338086 DEKP35659 375 aaKnown RBP8.13□□□□□ -1.11
PUM2-202ENST00000338086 NEFMP07197 916 aa8.12□□□□□ -1.11
PUM2-202ENST00000338086 RB1CC1Q8TDY2 1594 aa8.12□□□□□ -1.11
PUM2-202ENST00000338086 EIF4G2P78344 907 aaKnown RBP eCLIP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms