Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.53□□□□□ -1.21e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-213ENST00000503937 1564 ntTSL 1 (best)7.31□□□□□ -1.241e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.48□□□□□ -1.531e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.78□□□□□ -1.641e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.711e-8■□□□□ 8.3
FUBP3Q96I24 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.62□□□□□ -1.831e-8■□□□□ 8.3
FUBP3Q96I24 AC087190.4-201ENST00000574616 8334 ntBASIC4.16□□□□□ -1.741e-6■□□□□ 8.2
FUBP3Q96I24 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.381e-8■□□□□ 8.2
FUBP3Q96I24 SEC23B-204ENST00000377475 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.621e-8■□□□□ 8.2
FUBP3Q96I24 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.621e-8■□□□□ 8.2
FUBP3Q96I24 SEC23B-202ENST00000336714 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.751e-8■□□□□ 8.2
FUBP3Q96I24 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.2■□□□□ 0.026e-7■□□□□ 8.2
FUBP3Q96I24 SMARCE1-214ENST00000578112 2384 ntTSL 512.13□□□□□ -0.476e-7■□□□□ 8.2
FUBP3Q96I24 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.76e-7■□□□□ 8.2
FUBP3Q96I24 SMARCE1-207ENST00000469334 2128 ntTSL 58.54□□□□□ -1.046e-7■□□□□ 8.2
FUBP3Q96I24 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.25□□□□□ -0.133e-6■□□□□ 8.2
FUBP3Q96I24 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.373e-6■□□□□ 8.2
FUBP3Q96I24 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.583e-6■□□□□ 8.2
FUBP3Q96I24 CELF1-203ENST00000361904 1580 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.63e-6■□□□□ 8.2
FUBP3Q96I24 CELF1-207ENST00000524648 393 ntTSL 29.53□□□□□ -0.883e-6■□□□□ 8.2
FUBP3Q96I24 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.943e-6■□□□□ 8.2
FUBP3Q96I24 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.023e-6■□□□□ 8.2
FUBP3Q96I24 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.47□□□□□ -1.053e-6■□□□□ 8.2
FUBP3Q96I24 HGD-209ENST00000492108 631 ntTSL 27.43□□□□□ -1.223e-6■□□□□ 8.2
FUBP3Q96I24 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.233e-6■□□□□ 8.2
FUBP3Q96I24 PNN-206ENST00000557680 912 ntTSL 35.77□□□□□ -1.493e-6■□□□□ 8.2
FUBP3Q96I24 CELF1-220ENST00000539455 800 ntTSL 55.6□□□□□ -1.513e-6■□□□□ 8.2
FUBP3Q96I24 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.05□□□□□ -1.63e-6■□□□□ 8.2
FUBP3Q96I24 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.07■□□□□ 0.322e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.41□□□□□ -0.12e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC12.55□□□□□ -0.42e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC11.42□□□□□ -0.582e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC9.87□□□□□ -0.832e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC9.68□□□□□ -0.862e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.9□□□□□ -0.982e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.072e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-227ENST00000523897 871 ntTSL 37.97□□□□□ -1.132e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.56□□□□□ -1.22e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-218ENST00000521499 484 ntTSL 37.23□□□□□ -1.252e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-223ENST00000522349 531 ntTSL 56.47□□□□□ -1.372e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-228ENST00000523927 556 ntTSL 45.81□□□□□ -1.482e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-213ENST00000518441 781 ntTSL 25.54□□□□□ -1.522e-9■□□□□ 8.1
FUBP3Q96I24 ASPH-229ENST00000524173 587 ntTSL 44.94□□□□□ -1.622e-9■□□□□ 8.1
FUBP3Q96I24 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.453e-10■□□□□ 8.1
FUBP3Q96I24 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.46e-6■□□□□ 8.1
FUBP3Q96I24 CADM1-218ENST00000545380 2373 ntTSL 1 (best)17.53■□□□□ 0.45e-8■□□□□ 8.1
FUBP3Q96I24 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.335e-8■□□□□ 8.1
FUBP3Q96I24 MT2A-204ENST00000563985 688 ntTSL 214.72□□□□□ -0.053e-10■□□□□ 8.1
FUBP3Q96I24 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.58□□□□□ -0.083e-10■□□□□ 8.1
FUBP3Q96I24 MT2A-203ENST00000562017 903 nt14.4□□□□□ -0.13e-10■□□□□ 8.1
FUBP3Q96I24 MT2A-205ENST00000567300 416 ntTSL 214.02□□□□□ -0.173e-10■□□□□ 8.1
FUBP3Q96I24 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.176e-6■□□□□ 8.1
FUBP3Q96I24 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.336e-6■□□□□ 8.1
FUBP3Q96I24 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.355e-8■□□□□ 8.1
FUBP3Q96I24 ARID1A-212ENST00000636219 7058 ntAPPRIS ALT2 TSL 510.66□□□□□ -0.76e-6■□□□□ 8.1
FUBP3Q96I24 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.756e-6■□□□□ 8.1
FUBP3Q96I24 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.856e-6■□□□□ 8.1
FUBP3Q96I24 TMEM245-203ENST00000472207 3261 ntTSL 28.65□□□□□ -1.025e-8■□□□□ 8.1
FUBP3Q96I24 TMEM245-202ENST00000413712 1973 ntTSL 28.35□□□□□ -1.075e-8■□□□□ 8.1
FUBP3Q96I24 TRIM4-204ENST00000447480 639 ntTSL 37.57□□□□□ -1.26e-6■□□□□ 8.1
FUBP3Q96I24 TMEM245-205ENST00000491854 2435 ntTSL 27.23□□□□□ -1.255e-8■□□□□ 8.1
FUBP3Q96I24 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.25□□□□□ -1.416e-6■□□□□ 8.1
FUBP3Q96I24 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.536e-6■□□□□ 8.1
FUBP3Q96I24 NDFIP1-202ENST00000503388 4164 ntTSL 24.84□□□□□ -1.645e-8■□□□□ 8.1
FUBP3Q96I24 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.17□□□□□ -1.96e-6■□□□□ 8.1
FUBP3Q96I24 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.36□□□□□ -2.196e-6■□□□□ 8.1
FUBP3Q96I24 SNHG14-216ENST00000551938 1108 ntTSL 28.37□□□□□ -1.073e-7■□□□□ 8
FUBP3Q96I24 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.59□□□□□ -1.993e-7■□□□□ 8
Retrieved 68 of 4,568 protein–RNA pairs in 26.9 ms