RNA–Protein interactions for RNA: ENST00000629319.2

ZIM2-208, Transcript of zinc finger imprinted 2, human

APPRIS P1 TSL 5 BASIC

Gene ZIM2, Length 2,253 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZIM2-208	ENST00000629319	NISCH	Q9Y2I1	1504 aa		39.77	■■■■□ 3.96
ZIM2-208	ENST00000629319	SHROOM4	Q9ULL8	1493 aa		34.49	■■■■□ 3.11
ZIM2-208	ENST00000629319	SUPT5H	O00267	1087 aa	Known RBP	34.03	■■■■□ 3.04
ZIM2-208	ENST00000629319	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.75	■■■□□ 2.99
ZIM2-208	ENST00000629319	CCDC180	Q9P1Z9	1646 aa		33.54	■■■□□ 2.96
ZIM2-208	ENST00000629319	MYO15B	Q96JP2	1530 aa		33.44	■■■□□ 2.94
ZIM2-208	ENST00000629319	CHIC1	Q5VXU3	224 aa		33.29	■■■□□ 2.92
ZIM2-208	ENST00000629319	HRC	P23327	699 aa		33.24	■■■□□ 2.91
ZIM2-208	ENST00000629319	DCAF8L2	P0C7V8	631 aa		32.93	■■■□□ 2.86
ZIM2-208	ENST00000629319	PCGF6	Q9BYE7	350 aa		32.9	■■■□□ 2.86
ZIM2-208	ENST00000629319	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.58	■■■□□ 2.81
ZIM2-208	ENST00000629319	DCAF1	Q9Y4B6	1507 aa		32.55	■■■□□ 2.8
ZIM2-208	ENST00000629319	LOC105371045	A0A1W2PR82	267 aa		32.4	■■■□□ 2.78
ZIM2-208	ENST00000629319	TRIM26	Q12899	539 aa	Predicted RBP	32.05	■■■□□ 2.72
ZIM2-208	ENST00000629319	ABCC9	O60706	1549 aa		32.01	■■■□□ 2.71
ZIM2-208	ENST00000629319	RSF1	Q96T23	1441 aa	Predicted RBP	31.7	■■■□□ 2.66
ZIM2-208	ENST00000629319	SCRIB	Q14160	1630 aa		31.67	■■■□□ 2.66
ZIM2-208	ENST00000629319	TRIM41	Q8WV44	630 aa		31.58	■■■□□ 2.65
ZIM2-208	ENST00000629319	RB1CC1	Q8TDY2	1594 aa		31.57	■■■□□ 2.64
ZIM2-208	ENST00000629319	ZEB1	P37275	1124 aa	Predicted RBP	31.54	■■■□□ 2.64
ZIM2-208	ENST00000629319	FAM9A	Q8IZU1	332 aa	Predicted RBP	31.46	■■■□□ 2.63
ZIM2-208	ENST00000629319	EHMT2	Q96KQ7	1210 aa		31.27	■■■□□ 2.6
ZIM2-208	ENST00000629319	CECR2	Q9BXF3	1484 aa		31.06	■■■□□ 2.56
ZIM2-208	ENST00000629319	SCAF1	Q9H7N4	1312 aa	Known RBP	31.05	■■■□□ 2.56
ZIM2-208	ENST00000629319	MROH2B	Q7Z745	1585 aa		31.01	■■■□□ 2.55
ZIM2-208	ENST00000629319	WIZ	O95785	1651 aa		30.94	■■■□□ 2.54
ZIM2-208	ENST00000629319	PELP1	Q8IZL8	1130 aa	Known RBP	30.93	■■■□□ 2.54
ZIM2-208	ENST00000629319	NACAD	O15069	1562 aa		30.84	■■■□□ 2.53
ZIM2-208	ENST00000629319	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	30.76	■■■□□ 2.51
ZIM2-208	ENST00000629319	EIF4G1	Q04637	1599 aa	Known RBP	30.72	■■■□□ 2.51
ZIM2-208	ENST00000629319	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.72	■■■□□ 2.51
ZIM2-208	ENST00000629319	CCER1	Q8TC90	406 aa	Predicted RBP	30.67	■■■□□ 2.5
ZIM2-208	ENST00000629319	ACIN1	Q9UKV3	1341 aa	Known RBP	30.51	■■■□□ 2.47
ZIM2-208	ENST00000629319	ABCC8	Q09428	1581 aa		30.47	■■■□□ 2.47
ZIM2-208	ENST00000629319	NEUROD1	Q13562	356 aa		30.45	■■■□□ 2.47
ZIM2-208	ENST00000629319	TTBK1	Q5TCY1	1321 aa	Predicted RBP	30.41	■■■□□ 2.46
ZIM2-208	ENST00000629319	CCDC88B	A6NC98	1476 aa		30.39	■■■□□ 2.46
ZIM2-208	ENST00000629319	WRN	Q14191	1432 aa	Predicted RBP eCLIP	30.39	■■■□□ 2.46
ZIM2-208	ENST00000629319	DIEXF	Q68CQ4	756 aa	Known RBP	30.38	■■■□□ 2.45
ZIM2-208	ENST00000629319	TOP2A	P11388	1531 aa	Known RBP	30.35	■■■□□ 2.45
ZIM2-208	ENST00000629319	CEP162	Q5TB80	1403 aa		30.34	■■■□□ 2.45
ZIM2-208	ENST00000629319	SMARCA2	P51531	1590 aa		30.25	■■■□□ 2.43
ZIM2-208	ENST00000629319	SOGA1	O94964	1423 aa		30.23	■■■□□ 2.43
ZIM2-208	ENST00000629319	SMARCA4	P51532	1647 aa		30.22	■■■□□ 2.43
ZIM2-208	ENST00000629319	GTF3C3	Q9Y5Q9	886 aa		30.21	■■■□□ 2.43
ZIM2-208	ENST00000629319	CENPB	P07199	599 aa	Predicted RBP	30.2	■■■□□ 2.43
ZIM2-208	ENST00000629319	TNIK	Q9UKE5	1360 aa		30.18	■■■□□ 2.42
ZIM2-208	ENST00000629319	RUSC2	Q8N2Y8	1516 aa		30.09	■■■□□ 2.41
ZIM2-208	ENST00000629319	CSRNP3	Q8WYN3	585 aa		30.03	■■■□□ 2.4
ZIM2-208	ENST00000629319	EEA1	Q15075	1411 aa		30.03	■■■□□ 2.4
ZIM2-208	ENST00000629319	UBTF	P17480	764 aa	Known RBP	30.02	■■■□□ 2.4
ZIM2-208	ENST00000629319	UNC13A	Q9UPW8	1703 aa		30.02	■■■□□ 2.4
ZIM2-208	ENST00000629319	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.98	■■■□□ 2.39
ZIM2-208	ENST00000629319	GOLGA3	Q08378	1498 aa		29.94	■■■□□ 2.38
ZIM2-208	ENST00000629319	YTHDC1	Q96MU7	727 aa	Known RBP	29.79	■■■□□ 2.36
ZIM2-208	ENST00000629319	HNRNPUL2	Q1KMD3	747 aa	Known RBP	29.74	■■■□□ 2.35
ZIM2-208	ENST00000629319	KIF21B	O75037	1637 aa		29.7	■■■□□ 2.34
ZIM2-208	ENST00000629319	CEP164	Q9UPV0	1460 aa		29.69	■■■□□ 2.34
ZIM2-208	ENST00000629319	SYNJ1	O43426	1573 aa		29.68	■■■□□ 2.34
ZIM2-208	ENST00000629319	MIER1	Q8N108	512 aa		29.68	■■■□□ 2.34
ZIM2-208	ENST00000629319	CLIP1	P30622	1438 aa		29.64	■■■□□ 2.33
ZIM2-208	ENST00000629319	VPS8	Q8N3P4	1428 aa		29.57	■■■□□ 2.32
ZIM2-208	ENST00000629319	PEG3	Q9GZU2	1588 aa		29.52	■■■□□ 2.32
ZIM2-208	ENST00000629319	BICRA	Q9NZM4	1560 aa		29.49	■■■□□ 2.31
ZIM2-208	ENST00000629319	PABPN1	Q86U42	306 aa	Known RBP eCLIP	29.48	■■■□□ 2.31	8e-10	■□□□□ 10
ZIM2-208	ENST00000629319	MYT1	Q01538	1121 aa		29.47	■■■□□ 2.31
ZIM2-208	ENST00000629319	BAZ1B	Q9UIG0	1483 aa	Known RBP	29.46	■■■□□ 2.31
ZIM2-208	ENST00000629319	RAPGEF2	Q9Y4G8	1499 aa		29.46	■■■□□ 2.31
ZIM2-208	ENST00000629319	APLP2	Q06481	763 aa		29.43	■■■□□ 2.3
ZIM2-208	ENST00000629319	RANGAP1	P46060	587 aa	Predicted RBP	29.4	■■■□□ 2.3
ZIM2-208	ENST00000629319	ATAD2B	Q9ULI0	1458 aa		29.26	■■■□□ 2.27
ZIM2-208	ENST00000629319	TOP2B	Q02880	1626 aa		29.21	■■■□□ 2.27
ZIM2-208	ENST00000629319	DHX57	Q6P158	1386 aa	Known RBP	29.2	■■■□□ 2.27
ZIM2-208	ENST00000629319	CLSPN	Q9HAW4	1339 aa		29.14	■■■□□ 2.26
ZIM2-208	ENST00000629319	ARAP1	Q96P48	1450 aa		29.13	■■■□□ 2.25
ZIM2-208	ENST00000629319	BIVM-ERCC5	R4GMW8	1640 aa		29.11	■■■□□ 2.25
ZIM2-208	ENST00000629319	ERICH3	Q5RHP9	1530 aa		29.08	■■■□□ 2.25
ZIM2-208	ENST00000629319	KANK4	Q5T7N3	995 aa	Predicted RBP	29.05	■■■□□ 2.24
ZIM2-208	ENST00000629319	PRX	Q9BXM0	1461 aa		29.03	■■■□□ 2.24
ZIM2-208	ENST00000629319	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.95	■■■□□ 2.23
ZIM2-208	ENST00000629319	RRBP1	Q9P2E9	1410 aa	Known RBP	28.95	■■■□□ 2.22
ZIM2-208	ENST00000629319	CUX2	O14529	1486 aa		28.85	■■■□□ 2.21
ZIM2-208	ENST00000629319	CUX1	P39880	1505 aa		28.83	■■■□□ 2.21
ZIM2-208	ENST00000629319	CCNB3	Q8WWL7	1395 aa		28.81	■■■□□ 2.2
ZIM2-208	ENST00000629319	KIF27	Q86VH2	1401 aa		28.76	■■■□□ 2.2
ZIM2-208	ENST00000629319	ITGAE	P38570	1179 aa		28.76	■■■□□ 2.19
ZIM2-208	ENST00000629319	ARHGAP35	Q9NRY4	1499 aa		28.76	■■■□□ 2.19
ZIM2-208	ENST00000629319	MAPKBP1	O60336	1514 aa		28.67	■■■□□ 2.18
ZIM2-208	ENST00000629319	KCNH8	Q96L42	1107 aa		28.66	■■■□□ 2.18
ZIM2-208	ENST00000629319	RAB3GAP2	Q9H2M9	1393 aa		28.66	■■■□□ 2.18
ZIM2-208	ENST00000629319	TSHZ2	Q9NRE2	1034 aa		28.63	■■■□□ 2.17
ZIM2-208	ENST00000629319	HMGXB3	Q12766	1538 aa		28.6	■■■□□ 2.17
ZIM2-208	ENST00000629319	TIAM1	Q13009	1591 aa		28.57	■■■□□ 2.16
ZIM2-208	ENST00000629319	NCAPD3	P42695	1498 aa		28.52	■■■□□ 2.16
ZIM2-208	ENST00000629319	CFTR	P13569	1480 aa		28.5	■■■□□ 2.15
ZIM2-208	ENST00000629319	WDR97	A6NE52	1622 aa		28.49	■■■□□ 2.15
ZIM2-208	ENST00000629319	SETD5	Q9C0A6	1442 aa		28.48	■■■□□ 2.15
ZIM2-208	ENST00000629319	MAP3K1	Q13233	1512 aa		28.46	■■■□□ 2.15
ZIM2-208	ENST00000629319	LRRC9	Q6ZRR7	1453 aa		28.43	■■■□□ 2.14
ZIM2-208	ENST00000629319	DDX10	Q13206	875 aa	Known RBP	28.43	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms