Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 H3F3B-203ENST00000586518 1701 nt30.92■■■□□ 2.549e-76■■■■■ 40.3
FUBP3Q96I24 H3F3B-209ENST00000589949 842 ntTSL 219.28■□□□□ 0.689e-76■■■■■ 40.3
FUBP3Q96I24 H3F3B-213ENST00000593254 894 ntTSL 514.13□□□□□ -0.159e-76■■■■■ 40.3
FUBP3Q96I24 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.339e-76■■■■■ 40.3
FUBP3Q96I24 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC12.63□□□□□ -0.399e-76■■■■■ 40.3
FUBP3Q96I24 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC11.53□□□□□ -0.569e-76■■■■■ 40.3
FUBP3Q96I24 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.691e-75■■■■■ 41.6
FUBP3Q96I24 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.481e-75■■■■■ 41.6
FUBP3Q96I24 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC10.49□□□□□ -0.731e-75■■■■■ 41.6
FUBP3Q96I24 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.623e-46■■■□□ 17.3
FUBP3Q96I24 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.823e-46■■■□□ 17.3
FUBP3Q96I24 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.28■□□□□ 0.048e-45■□□□□ 11.2
FUBP3Q96I24 NEAT1_1.1-201ENST00000620348 120 ntBASIC12.4□□□□□ -0.422e-44■□□□□ 9.6
FUBP3Q96I24 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.66□□□□□ -0.066e-43■□□□□ 9.7
FUBP3Q96I24 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC14.05□□□□□ -0.169e-43■□□□□ 9.5
FUBP3Q96I24 NEAT1_3.1-201ENST00000613347 159 ntBASIC11.93□□□□□ -0.53e-42■□□□□ 10.2
FUBP3Q96I24 HNRNPA2B1-203ENST00000360787 1724 ntTSL 515.2■□□□□ 0.022e-41■□□□□ 9.2
FUBP3Q96I24 HNRNPA2B1-206ENST00000490912 5328 ntTSL 214.9□□□□□ -0.022e-41■□□□□ 9.2
FUBP3Q96I24 HNRNPA2B1-204ENST00000463181 6284 ntTSL 213.6□□□□□ -0.232e-41■□□□□ 9.2
FUBP3Q96I24 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.42e-41■□□□□ 9.2
FUBP3Q96I24 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC10.88□□□□□ -0.672e-41■□□□□ 9.2
FUBP3Q96I24 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.142e-41■□□□□ 9.2
FUBP3Q96I24 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.87■□□□□ 0.291e-40■■■□□ 18.2
FUBP3Q96I24 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.7□□□□□ -1.52e-37■■■□□ 16.6
FUBP3Q96I24 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.25■□□□□ 0.353e-37■■■□□ 18.7
FUBP3Q96I24 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.083e-37■■■□□ 18.7
FUBP3Q96I24 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.386e-36■■■■■ 54.8
FUBP3Q96I24 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.33e-32■■■■■ 52.8
FUBP3Q96I24 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.223e-32■■■■■ 52.8
FUBP3Q96I24 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.09■■□□□ 1.133e-32■■■■■ 52.8
FUBP3Q96I24 HLF-209ENST00000575307 582 ntTSL 211.15□□□□□ -0.626e-32■□□□□ 8.4
FUBP3Q96I24 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.356e-29■■■■□ 26.1
FUBP3Q96I24 ATP6AP2-223ENST00000637165 534 ntTSL 55.47□□□□□ -1.532e-28■■■■□ 23
FUBP3Q96I24 SDC2-207ENST00000522911 677 ntTSL 3 BASIC10.13□□□□□ -0.794e-28■■■■■ 39.5
FUBP3Q96I24 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.14■□□□□ 0.58e-28■■■■■ 37.6
FUBP3Q96I24 MSL1-201ENST00000339569 3424 ntTSL 25.14□□□□□ -1.598e-28■■■■■ 37.6
FUBP3Q96I24 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.088e-27■■■■■ 46.4
FUBP3Q96I24 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.05□□□□□ -0.328e-27■■■■■ 46.4
FUBP3Q96I24 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC10.05□□□□□ -0.88e-27■■■■■ 46.4
FUBP3Q96I24 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.328e-27■■■■■ 46.4
FUBP3Q96I24 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.39□□□□□ -1.398e-27■■■■■ 46.4
FUBP3Q96I24 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8□□□□□ -1.138e-26■■□□□ 12
FUBP3Q96I24 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.868e-26■■□□□ 12
FUBP3Q96I24 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.9■■□□□ 1.262e-25■□□□□ 10.4
FUBP3Q96I24 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.692e-25■□□□□ 10.4
FUBP3Q96I24 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.65■□□□□ 0.12e-25■■■□□ 18.7
FUBP3Q96I24 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.78■□□□□ 0.282e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.262e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.172e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.162e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.322e-25■□□□□ 8.3
FUBP3Q96I24 STMN1-207ENST00000465604 2947 ntTSL 1 (best)4.21□□□□□ -1.742e-25■□□□□ 8.3
FUBP3Q96I24 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.35■□□□□ 0.214e-25■■■■□ 26.1
FUBP3Q96I24 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.964e-25■■■■■ 107.2
FUBP3Q96I24 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC9.4□□□□□ -0.94e-25■■□□□ 12.8
FUBP3Q96I24 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.994e-25■■□□□ 12.8
FUBP3Q96I24 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.994e-25■■□□□ 12.8
FUBP3Q96I24 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.31□□□□□ -1.084e-25■■□□□ 12.8
FUBP3Q96I24 PEG10-204ENST00000493935 763 ntTSL 413.17□□□□□ -0.34e-25■■□□□ 12.7
FUBP3Q96I24 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.86□□□□□ -0.035e-25■■■■■ 86.6
FUBP3Q96I24 FABP1-204ENST00000495375 2084 ntTSL 314.56□□□□□ -0.085e-25■■■■■ 86.6
FUBP3Q96I24 C10orf10-203ENST00000496638 868 ntTSL 323.12■■□□□ 1.297e-25■■■■■ 46.3
FUBP3Q96I24 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.257e-25■■■■■ 46.3
FUBP3Q96I24 PEG10-201ENST00000465184 788 ntTSL 35.5□□□□□ -1.539e-25■■□□□ 13.7
FUBP3Q96I24 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.481e-24■■□□□ 12.1
FUBP3Q96I24 PCSK9-202ENST00000490692 3891 ntTSL 210.77□□□□□ -0.681e-24■■□□□ 12.1
FUBP3Q96I24 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.673e-24■■■□□ 16.2
FUBP3Q96I24 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.994e-24■□□□□ 9.7
FUBP3Q96I24 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.25■□□□□ 0.517e-24■■■□□ 15.8
FUBP3Q96I24 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.117e-24■■■□□ 15.8
FUBP3Q96I24 HSP90B1-203ENST00000548462 3032 ntTSL 211.53□□□□□ -0.567e-24■■■□□ 15.8
FUBP3Q96I24 HSP90B1-207ENST00000550595 694 ntTSL 26.71□□□□□ -1.347e-24■■■□□ 15.8
FUBP3Q96I24 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.048e-24■■■■■ 29.9
FUBP3Q96I24 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.47□□□□□ -0.091e-23■■■■■ 55.1
FUBP3Q96I24 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.111e-23■■■■■ 55.1
FUBP3Q96I24 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.88□□□□□ -0.351e-23■■■■■ 55.1
FUBP3Q96I24 AL132671.2-201ENST00000467125 930 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.631e-23■■■■■ 55.1
FUBP3Q96I24 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.69■□□□□ 0.263e-23■□□□□ 10.5
FUBP3Q96I24 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.553e-23■■■■■ 37.3
FUBP3Q96I24 AC068547.1-202ENST00000637224 2827 ntAPPRIS ALT2 TSL 58.22□□□□□ -1.093e-23■■■■■ 37.3
FUBP3Q96I24 AC068547.1-201ENST00000636024 1303 ntAPPRIS ALT2 TSL 56.14□□□□□ -1.433e-23■■■■■ 37.3
FUBP3Q96I24 ARL5A-203ENST00000446896 1268 ntTSL 26.09□□□□□ -1.433e-23■■■■■ 37.3
FUBP3Q96I24 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.961e-22■■■■■ 76.1
FUBP3Q96I24 SCARB2-208ENST00000638372 4811 ntTSL 514.31□□□□□ -0.122e-22■■■■■ 55.4
FUBP3Q96I24 ZNF217-204ENST00000437222 746 ntTSL 210.8□□□□□ -0.683e-22■■■■■ 30.1
FUBP3Q96I24 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.243e-22■■■■■ 27.8
FUBP3Q96I24 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.69□□□□□ -1.343e-22■■■■■ 27.8
FUBP3Q96I24 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.924e-22■■□□□ 11.8
FUBP3Q96I24 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.51■□□□□ 0.075e-22■■■□□ 18.8
FUBP3Q96I24 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.15e-22■■■□□ 18.8
FUBP3Q96I24 KDELR2-205ENST00000463747 376 ntTSL 511.31□□□□□ -0.65e-22■■■□□ 18.8
FUBP3Q96I24 KDELR2-203ENST00000454368 2478 ntTSL 210.66□□□□□ -0.75e-22■■■□□ 18.8
FUBP3Q96I24 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.148e-22■■■□□ 18.6
FUBP3Q96I24 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.128e-22■■■□□ 18.6
FUBP3Q96I24 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.171e-21■■□□□ 13.1
FUBP3Q96I24 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.151e-21■■□□□ 13.1
FUBP3Q96I24 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.381e-21■■□□□ 13.1
FUBP3Q96I24 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.381e-21■■□□□ 13.1
FUBP3Q96I24 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.681e-21■■□□□ 13.1
FUBP3Q96I24 CD164-206ENST00000499860 2845 ntTSL 1 (best)1.99□□□□□ -2.092e-21■□□□□ 9.5
Retrieved 100 of 4,568 protein–RNA pairs in 35.2 ms