RNA–Protein interactions for RNA: ENST00000312960.3

SIAH2-201, Transcript of siah E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIAH2, Length 2,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH2-201ENST00000312960 NISCHQ9Y2I1 1504 aa47.92■■■■■ 5.26
SIAH2-201ENST00000312960 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
SIAH2-201ENST00000312960 ZCCHC6Q5VYS8 1495 aaKnown RBP40.51■■■■■ 4.07
SIAH2-201ENST00000312960 SHROOM4Q9ULL8 1493 aa40.4■■■■■ 4.06
SIAH2-201ENST00000312960 SUPT5HO00267 1087 aaKnown RBP39.55■■■■□ 3.92
SIAH2-201ENST00000312960 DCAF8L2P0C7V8 631 aa39.48■■■■□ 3.91
SIAH2-201ENST00000312960 DCAF1Q9Y4B6 1507 aa39.46■■■■□ 3.91
SIAH2-201ENST00000312960 ABCC9O60706 1549 aa38.98■■■■□ 3.83
SIAH2-201ENST00000312960 MYO15BQ96JP2 1530 aa38.62■■■■□ 3.77
SIAH2-201ENST00000312960 CHIC1Q5VXU3 224 aa38.51■■■■□ 3.76
SIAH2-201ENST00000312960 NACADO15069 1562 aa38.35■■■■□ 3.73
SIAH2-201ENST00000312960 SCRIBQ14160 1630 aa38.11■■■■□ 3.69
SIAH2-201ENST00000312960 RB1CC1Q8TDY2 1594 aa37.96■■■■□ 3.67
SIAH2-201ENST00000312960 RSF1Q96T23 1441 aaPredicted RBP37.81■■■■□ 3.64
SIAH2-201ENST00000312960 CECR2Q9BXF3 1484 aa37.3■■■■□ 3.56
SIAH2-201ENST00000312960 UNC13AQ9UPW8 1703 aa37.25■■■■□ 3.55
SIAH2-201ENST00000312960 LOC105371045A0A1W2PR82 267 aa37.25■■■■□ 3.55
SIAH2-201ENST00000312960 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
SIAH2-201ENST00000312960 TRIM41Q8WV44 630 aa36.97■■■■□ 3.51
SIAH2-201ENST00000312960 PCGF6Q9BYE7 350 aa36.96■■■■□ 3.51
SIAH2-201ENST00000312960 WIZO95785 1651 aa36.95■■■■□ 3.5
SIAH2-201ENST00000312960 PABPN1Q86U42 306 aaKnown RBP eCLIP36.94■■■■□ 3.5
SIAH2-201ENST00000312960 BICRAQ9NZM4 1560 aa36.94■■■■□ 3.5
SIAH2-201ENST00000312960 HRCP23327 699 aa36.94■■■■□ 3.5
SIAH2-201ENST00000312960 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
SIAH2-201ENST00000312960 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
SIAH2-201ENST00000312960 FAM9AQ8IZU1 332 aaPredicted RBP36.5■■■■□ 3.43
SIAH2-201ENST00000312960 TRIM26Q12899 539 aaPredicted RBP36.46■■■■□ 3.43
SIAH2-201ENST00000312960 EIF4G1Q04637 1599 aaKnown RBP36.46■■■■□ 3.43
SIAH2-201ENST00000312960 TOP2AP11388 1531 aaKnown RBP36.45■■■■□ 3.43
SIAH2-201ENST00000312960 CCDC88BA6NC98 1476 aa36.25■■■■□ 3.39
SIAH2-201ENST00000312960 SMARCA2P51531 1590 aa36.22■■■■□ 3.39
SIAH2-201ENST00000312960 EHMT2Q96KQ7 1210 aa36.05■■■■□ 3.36
SIAH2-201ENST00000312960 PPARGC1BQ86YN6 1023 aaKnown RBP36.03■■■■□ 3.36
SIAH2-201ENST00000312960 ABCC8Q09428 1581 aa35.99■■■■□ 3.35
SIAH2-201ENST00000312960 PEG3Q9GZU2 1588 aa35.97■■■■□ 3.35
SIAH2-201ENST00000312960 ATAD2BQ9ULI0 1458 aa35.88■■■■□ 3.33
SIAH2-201ENST00000312960 BAZ1BQ9UIG0 1483 aaKnown RBP35.64■■■■□ 3.3
SIAH2-201ENST00000312960 SOGA1O94964 1423 aa35.64■■■■□ 3.3
SIAH2-201ENST00000312960 ZEB1P37275 1124 aaPredicted RBP35.62■■■■□ 3.29
SIAH2-201ENST00000312960 EEA1Q15075 1411 aa35.59■■■■□ 3.29
SIAH2-201ENST00000312960 WRNQ14191 1432 aaPredicted RBP eCLIP35.5■■■■□ 3.27
SIAH2-201ENST00000312960 NCAPD3P42695 1498 aa35.49■■■■□ 3.27
SIAH2-201ENST00000312960 CSRNP3Q8WYN3 585 aa35.47■■■■□ 3.27
SIAH2-201ENST00000312960 RUSC2Q8N2Y8 1516 aa35.46■■■■□ 3.27
SIAH2-201ENST00000312960 TNIKQ9UKE5 1360 aa35.45■■■■□ 3.27
SIAH2-201ENST00000312960 CEP162Q5TB80 1403 aa35.4■■■■□ 3.26
SIAH2-201ENST00000312960 HMGXB3Q12766 1538 aa35.36■■■■□ 3.25
SIAH2-201ENST00000312960 SYNJ1O43426 1573 aa35.32■■■■□ 3.24
SIAH2-201ENST00000312960 GOLGA3Q08378 1498 aa35.25■■■■□ 3.23
SIAH2-201ENST00000312960 UBTFP17480 764 aaKnown RBP35.21■■■■□ 3.23
SIAH2-201ENST00000312960 CC2D2AQ9P2K1 1620 aa35.19■■■■□ 3.22
SIAH2-201ENST00000312960 CEP164Q9UPV0 1460 aa35.09■■■■□ 3.21
SIAH2-201ENST00000312960 KIF21BO75037 1637 aa35.08■■■■□ 3.21
SIAH2-201ENST00000312960 TOP2BQ02880 1626 aa34.98■■■■□ 3.19
SIAH2-201ENST00000312960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.91■■■■□ 3.18
SIAH2-201ENST00000312960 BIVM-ERCC5R4GMW8 1640 aa34.87■■■■□ 3.17
SIAH2-201ENST00000312960 TTBK1Q5TCY1 1321 aaPredicted RBP34.86■■■■□ 3.17
SIAH2-201ENST00000312960 CCER1Q8TC90 406 aaPredicted RBP34.84■■■■□ 3.17
SIAH2-201ENST00000312960 CLIP1P30622 1438 aa34.8■■■■□ 3.16
SIAH2-201ENST00000312960 RAPGEF2Q9Y4G8 1499 aa34.8■■■■□ 3.16
SIAH2-201ENST00000312960 CFTRP13569 1480 aa34.79■■■■□ 3.16
SIAH2-201ENST00000312960 VPS8Q8N3P4 1428 aa34.66■■■■□ 3.14
SIAH2-201ENST00000312960 CADPSQ9ULU8 1353 aa34.64■■■■□ 3.14
SIAH2-201ENST00000312960 CUX1P39880 1505 aa34.64■■■■□ 3.14
SIAH2-201ENST00000312960 PRXQ9BXM0 1461 aa34.59■■■■□ 3.13
SIAH2-201ENST00000312960 ERICH3Q5RHP9 1530 aa34.58■■■■□ 3.13
SIAH2-201ENST00000312960 DNAJC5BQ9UF47 199 aa34.57■■■■□ 3.12
SIAH2-201ENST00000312960 KIF27Q86VH2 1401 aa34.45■■■■□ 3.1
SIAH2-201ENST00000312960 PRDM2Q13029 1718 aa34.41■■■■□ 3.1
SIAH2-201ENST00000312960 APLP2Q06481 763 aa34.4■■■■□ 3.1
SIAH2-201ENST00000312960 RANGAP1P46060 587 aaPredicted RBP34.38■■■■□ 3.09
SIAH2-201ENST00000312960 NESP48681 1621 aa34.34■■■■□ 3.09
SIAH2-201ENST00000312960 ARAP1Q96P48 1450 aa34.29■■■■□ 3.08
SIAH2-201ENST00000312960 HNRNPUL2Q1KMD3 747 aaKnown RBP34.25■■■■□ 3.07
SIAH2-201ENST00000312960 FANCD2Q9BXW9 1451 aa34.24■■■■□ 3.07
SIAH2-201ENST00000312960 LAMC3Q9Y6N6 1575 aa34.14■■■■□ 3.06
SIAH2-201ENST00000312960 CUX2O14529 1486 aa34.11■■■■□ 3.05
SIAH2-201ENST00000312960 IGF1RP08069 1367 aa34.1■■■■□ 3.05
SIAH2-201ENST00000312960 DIEXFQ68CQ4 756 aaKnown RBP34.06■■■■□ 3.04
SIAH2-201ENST00000312960 FGD5Q6ZNL6 1462 aa34.04■■■■□ 3.04
SIAH2-201ENST00000312960 ARHGAP35Q9NRY4 1499 aa34.04■■■■□ 3.04
SIAH2-201ENST00000312960 KANK4Q5T7N3 995 aaPredicted RBP34.01■■■■□ 3.03
SIAH2-201ENST00000312960 PDS5BQ9NTI5 1447 aa33.94■■■■□ 3.02
SIAH2-201ENST00000312960 ZNF316A6NFI3 1004 aaPredicted RBP33.93■■■■□ 3.02
SIAH2-201ENST00000312960 CARMIL1Q5VZK9 1371 aa33.92■■■■□ 3.02
SIAH2-201ENST00000312960 DNMBPQ6XZF7 1577 aa33.9■■■■□ 3.02
SIAH2-201ENST00000312960 TOPBP1Q92547 1522 aa33.9■■■■□ 3.02
SIAH2-201ENST00000312960 RRBP1Q9P2E9 1410 aaKnown RBP33.86■■■■□ 3.01
SIAH2-201ENST00000312960 URB2Q14146 1524 aaKnown RBP33.83■■■■□ 3.01
SIAH2-201ENST00000312960 SCAF1Q9H7N4 1312 aaKnown RBP33.8■■■■□ 3
SIAH2-201ENST00000312960 KIF21AQ7Z4S6 1674 aa33.77■■■■□ 3
SIAH2-201ENST00000312960 POLA1P09884 1462 aaPredicted RBP33.77■■■■□ 3
SIAH2-201ENST00000312960 RAD54L2Q9Y4B4 1467 aa33.75■■■□□ 2.99
SIAH2-201ENST00000312960 CLSPNQ9HAW4 1339 aa33.74■■■□□ 2.99
SIAH2-201ENST00000312960 MAP3K1Q13233 1512 aa33.71■■■□□ 2.99
SIAH2-201ENST00000312960 ABCA10Q8WWZ4 1543 aa33.71■■■□□ 2.99
SIAH2-201ENST00000312960 DHX57Q6P158 1386 aaKnown RBP33.69■■■□□ 2.98
SIAH2-201ENST00000312960 CCNB3Q8WWL7 1395 aa33.68■■■□□ 2.98
SIAH2-201ENST00000312960 ACIN1Q9UKV3 1341 aaKnown RBP33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms