Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.58■■■□□ 2.49
BEST1O76090 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
BEST1O76090 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
BEST1O76090 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
BEST1O76090 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
BEST1O76090 AC145285.7-201ENST00000614819 1539 ntBASIC30.52■■■□□ 2.48
BEST1O76090 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
BEST1O76090 DYNLL1-208ENST00000550178 581 ntBASIC30.52■■■□□ 2.48
BEST1O76090 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
BEST1O76090 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
BEST1O76090 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
BEST1O76090 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
BEST1O76090 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
BEST1O76090 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
BEST1O76090 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.47■■■□□ 2.47
BEST1O76090 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
BEST1O76090 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.46■■■□□ 2.47
BEST1O76090 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.41■■■□□ 2.46
BEST1O76090 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.39■■■□□ 2.46
BEST1O76090 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.39■■■□□ 2.46
BEST1O76090 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
BEST1O76090 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
BEST1O76090 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
BEST1O76090 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
BEST1O76090 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.36■■■□□ 2.45
BEST1O76090 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
BEST1O76090 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.33■■■□□ 2.45
BEST1O76090 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.32■■■□□ 2.44
BEST1O76090 AL031258.1-201ENST00000623562 325 ntBASIC30.32■■■□□ 2.44
BEST1O76090 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
BEST1O76090 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.31■■■□□ 2.44
BEST1O76090 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
BEST1O76090 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.3■■■□□ 2.44
BEST1O76090 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
BEST1O76090 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.26■■■□□ 2.44
BEST1O76090 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
BEST1O76090 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
BEST1O76090 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
BEST1O76090 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
BEST1O76090 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
BEST1O76090 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
BEST1O76090 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
BEST1O76090 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
BEST1O76090 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
BEST1O76090 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
BEST1O76090 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
BEST1O76090 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.04■■■□□ 2.4
BEST1O76090 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
BEST1O76090 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
BEST1O76090 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.98■■■□□ 2.39
BEST1O76090 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.97■■■□□ 2.39
BEST1O76090 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.97■■■□□ 2.39
BEST1O76090 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
BEST1O76090 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
BEST1O76090 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.93■■■□□ 2.38
BEST1O76090 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.91■■■□□ 2.38
BEST1O76090 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
BEST1O76090 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
BEST1O76090 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
BEST1O76090 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.87■■■□□ 2.37
BEST1O76090 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.87■■■□□ 2.37
BEST1O76090 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
BEST1O76090 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
BEST1O76090 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
BEST1O76090 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.85■■■□□ 2.37
BEST1O76090 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
BEST1O76090 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.84■■■□□ 2.37
BEST1O76090 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.82■■■□□ 2.36
BEST1O76090 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
BEST1O76090 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
BEST1O76090 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
BEST1O76090 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
BEST1O76090 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.73■■■□□ 2.35
BEST1O76090 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
BEST1O76090 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.72■■■□□ 2.35
BEST1O76090 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
BEST1O76090 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BEST1O76090 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BEST1O76090 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.67■■■□□ 2.34
BEST1O76090 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.66■■■□□ 2.34
BEST1O76090 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.65■■■□□ 2.34
BEST1O76090 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.65■■■□□ 2.34
BEST1O76090 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.62■■■□□ 2.33
BEST1O76090 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.61■■■□□ 2.33
BEST1O76090 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
BEST1O76090 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
BEST1O76090 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
BEST1O76090 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BEST1O76090 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BEST1O76090 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
BEST1O76090 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.54■■■□□ 2.32
BEST1O76090 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
BEST1O76090 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
BEST1O76090 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
BEST1O76090 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
BEST1O76090 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.52■■■□□ 2.32
BEST1O76090 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
BEST1O76090 RARRES2P7-201ENST00000567349 469 ntBASIC29.51■■■□□ 2.31
BEST1O76090 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.5■■■□□ 2.31
BEST1O76090 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms