Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.32■■■■□ 3.4
BEST1O76090 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
BEST1O76090 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.25■■■■□ 3.23
BEST1O76090 AL356512.1-201ENST00000607453 1739 ntBASIC35.23■■■■□ 3.23
BEST1O76090 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
BEST1O76090 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
BEST1O76090 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.97■■■■□ 3.19
BEST1O76090 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.5■■■■□ 3.11
BEST1O76090 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.35■■■■□ 3.09
BEST1O76090 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.28■■■■□ 3.08
BEST1O76090 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.28■■■■□ 3.08
BEST1O76090 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.97■■■■□ 3.03
BEST1O76090 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.89■■■■□ 3.02
BEST1O76090 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.86■■■■□ 3.01
BEST1O76090 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.74■■■□□ 2.99
BEST1O76090 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
BEST1O76090 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.65■■■□□ 2.98
BEST1O76090 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.55■■■□□ 2.96
BEST1O76090 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.51■■■□□ 2.95
BEST1O76090 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.36■■■□□ 2.93
BEST1O76090 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
BEST1O76090 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
BEST1O76090 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
BEST1O76090 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
BEST1O76090 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
BEST1O76090 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
BEST1O76090 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
BEST1O76090 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
BEST1O76090 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.59■■■□□ 2.81
BEST1O76090 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
BEST1O76090 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
BEST1O76090 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.51■■■□□ 2.79
BEST1O76090 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BEST1O76090 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
BEST1O76090 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.44■■■□□ 2.78
BEST1O76090 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.41■■■□□ 2.78
BEST1O76090 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.4■■■□□ 2.78
BEST1O76090 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
BEST1O76090 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
BEST1O76090 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.25■■■□□ 2.75
BEST1O76090 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
BEST1O76090 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
BEST1O76090 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
BEST1O76090 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
BEST1O76090 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.05■■■□□ 2.72
BEST1O76090 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
BEST1O76090 AC015813.7-201ENST00000623294 581 ntBASIC31.99■■■□□ 2.71
BEST1O76090 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
BEST1O76090 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
BEST1O76090 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
BEST1O76090 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.78■■■□□ 2.68
BEST1O76090 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
BEST1O76090 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
BEST1O76090 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.68■■■□□ 2.66
BEST1O76090 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.65■■■□□ 2.66
BEST1O76090 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
BEST1O76090 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.61■■■□□ 2.65
BEST1O76090 AC006077.2-201ENST00000623591 457 ntBASIC31.54■■■□□ 2.64
BEST1O76090 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BEST1O76090 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
BEST1O76090 ZNRF2P1-201ENST00000441407 443 ntBASIC31.42■■■□□ 2.62
BEST1O76090 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
BEST1O76090 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
BEST1O76090 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BEST1O76090 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
BEST1O76090 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
BEST1O76090 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
BEST1O76090 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.24■■■□□ 2.59
BEST1O76090 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
BEST1O76090 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
BEST1O76090 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
BEST1O76090 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
BEST1O76090 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
BEST1O76090 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
BEST1O76090 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
BEST1O76090 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
BEST1O76090 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
BEST1O76090 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.94■■■□□ 2.54
BEST1O76090 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
BEST1O76090 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
BEST1O76090 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
BEST1O76090 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
BEST1O76090 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
BEST1O76090 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
BEST1O76090 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
BEST1O76090 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
BEST1O76090 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
BEST1O76090 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.82■■■□□ 2.52
BEST1O76090 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
BEST1O76090 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.77■■■□□ 2.52
BEST1O76090 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.77■■■□□ 2.52
BEST1O76090 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.73■■■□□ 2.51
BEST1O76090 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
BEST1O76090 AP002365.1-201ENST00000603448 772 ntBASIC30.69■■■□□ 2.5
BEST1O76090 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.69■■■□□ 2.5
BEST1O76090 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
BEST1O76090 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
BEST1O76090 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.63■■■□□ 2.49
BEST1O76090 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
BEST1O76090 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms