Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV10-1A0A0K0K1A3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV10-1A0A0K0K1A3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV10-1A0A0K0K1A3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV10-1A0A0K0K1A3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRBV10-1A0A0K0K1A3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
TRBV10-1A0A0K0K1A3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV10-1A0A0K0K1A3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV10-1A0A0K0K1A3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV10-1A0A0K0K1A3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV10-1A0A0K0K1A3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV10-1A0A0K0K1A3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV10-1A0A0K0K1A3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV10-1A0A0K0K1A3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV10-1A0A0K0K1A3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV10-1A0A0K0K1A3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBV10-1A0A0K0K1A3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TRBV10-1A0A0K0K1A3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV10-1A0A0K0K1A3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.09■□□□□ 0.81
TRBV10-1A0A0K0K1A3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.09■□□□□ 0.81
TRBV10-1A0A0K0K1A3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRBV10-1A0A0K0K1A3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV10-1A0A0K0K1A3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV10-1A0A0K0K1A3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV10-1A0A0K0K1A3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV10-1A0A0K0K1A3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRBV10-1A0A0K0K1A3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRBV10-1A0A0K0K1A3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV10-1A0A0K0K1A3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV10-1A0A0K0K1A3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV10-1A0A0K0K1A3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV10-1A0A0K0K1A3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV10-1A0A0K0K1A3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRBV10-1A0A0K0K1A3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV10-1A0A0K0K1A3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV10-1A0A0K0K1A3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV10-1A0A0K0K1A3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV10-1A0A0K0K1A3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV10-1A0A0K0K1A3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV10-1A0A0K0K1A3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV10-1A0A0K0K1A3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV10-1A0A0K0K1A3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV10-1A0A0K0K1A3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRBV10-1A0A0K0K1A3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV10-1A0A0K0K1A3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV10-1A0A0K0K1A3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV10-1A0A0K0K1A3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TRBV10-1A0A0K0K1A3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV10-1A0A0K0K1A3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.87■□□□□ 0.77
TRBV10-1A0A0K0K1A3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV10-1A0A0K0K1A3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV10-1A0A0K0K1A3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV10-1A0A0K0K1A3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.84■□□□□ 0.77
TRBV10-1A0A0K0K1A3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV10-1A0A0K0K1A3 AC006077.2-201ENST00000623591 457 ntBASIC19.84■□□□□ 0.77
TRBV10-1A0A0K0K1A3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV10-1A0A0K0K1A3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV10-1A0A0K0K1A3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV10-1A0A0K0K1A3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV10-1A0A0K0K1A3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV10-1A0A0K0K1A3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV10-1A0A0K0K1A3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV10-1A0A0K0K1A3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV10-1A0A0K0K1A3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRBV10-1A0A0K0K1A3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV10-1A0A0K0K1A3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRBV10-1A0A0K0K1A3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV10-1A0A0K0K1A3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV10-1A0A0K0K1A3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV10-1A0A0K0K1A3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRBV10-1A0A0K0K1A3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV10-1A0A0K0K1A3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV10-1A0A0K0K1A3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRBV10-1A0A0K0K1A3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV10-1A0A0K0K1A3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV10-1A0A0K0K1A3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.72■□□□□ 0.75
TRBV10-1A0A0K0K1A3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.72■□□□□ 0.75
TRBV10-1A0A0K0K1A3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.72■□□□□ 0.75
TRBV10-1A0A0K0K1A3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRBV10-1A0A0K0K1A3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV10-1A0A0K0K1A3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
TRBV10-1A0A0K0K1A3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV10-1A0A0K0K1A3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBV10-1A0A0K0K1A3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV10-1A0A0K0K1A3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV10-1A0A0K0K1A3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV10-1A0A0K0K1A3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV10-1A0A0K0K1A3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV10-1A0A0K0K1A3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV10-1A0A0K0K1A3 ZNRF2P1-201ENST00000441407 443 ntBASIC19.66■□□□□ 0.74
TRBV10-1A0A0K0K1A3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV10-1A0A0K0K1A3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV10-1A0A0K0K1A3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV10-1A0A0K0K1A3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.63■□□□□ 0.73
TRBV10-1A0A0K0K1A3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV10-1A0A0K0K1A3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV10-1A0A0K0K1A3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV10-1A0A0K0K1A3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV10-1A0A0K0K1A3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.61■□□□□ 0.73
TRBV10-1A0A0K0K1A3 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms