Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRBV10-1A0A0K0K1A3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TRBV10-1A0A0K0K1A3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.3■■□□□ 1.32
TRBV10-1A0A0K0K1A3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.3■■□□□ 1.32
TRBV10-1A0A0K0K1A3 AL356512.1-201ENST00000607453 1739 ntBASIC23.28■■□□□ 1.32
TRBV10-1A0A0K0K1A3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRBV10-1A0A0K0K1A3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TRBV10-1A0A0K0K1A3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.99■■□□□ 1.27
TRBV10-1A0A0K0K1A3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TRBV10-1A0A0K0K1A3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.8■■□□□ 1.24
TRBV10-1A0A0K0K1A3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRBV10-1A0A0K0K1A3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
TRBV10-1A0A0K0K1A3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRBV10-1A0A0K0K1A3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRBV10-1A0A0K0K1A3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.31■■□□□ 1.16
TRBV10-1A0A0K0K1A3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TRBV10-1A0A0K0K1A3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.25■■□□□ 1.15
TRBV10-1A0A0K0K1A3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
TRBV10-1A0A0K0K1A3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBV10-1A0A0K0K1A3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TRBV10-1A0A0K0K1A3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
TRBV10-1A0A0K0K1A3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV10-1A0A0K0K1A3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRBV10-1A0A0K0K1A3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRBV10-1A0A0K0K1A3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRBV10-1A0A0K0K1A3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRBV10-1A0A0K0K1A3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRBV10-1A0A0K0K1A3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRBV10-1A0A0K0K1A3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
TRBV10-1A0A0K0K1A3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBV10-1A0A0K0K1A3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV10-1A0A0K0K1A3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRBV10-1A0A0K0K1A3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV10-1A0A0K0K1A3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
TRBV10-1A0A0K0K1A3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.54■■□□□ 1.04
TRBV10-1A0A0K0K1A3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV10-1A0A0K0K1A3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.52■■□□□ 1.04
TRBV10-1A0A0K0K1A3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV10-1A0A0K0K1A3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.46■■□□□ 1.03
TRBV10-1A0A0K0K1A3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRBV10-1A0A0K0K1A3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TRBV10-1A0A0K0K1A3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV10-1A0A0K0K1A3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.29■■□□□ 1
TRBV10-1A0A0K0K1A3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV10-1A0A0K0K1A3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV10-1A0A0K0K1A3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.23■□□□□ 0.99
TRBV10-1A0A0K0K1A3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.21■□□□□ 0.99
TRBV10-1A0A0K0K1A3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TRBV10-1A0A0K0K1A3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV10-1A0A0K0K1A3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBV10-1A0A0K0K1A3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV10-1A0A0K0K1A3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV10-1A0A0K0K1A3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.06■□□□□ 0.96
TRBV10-1A0A0K0K1A3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV10-1A0A0K0K1A3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC21.04■□□□□ 0.96
TRBV10-1A0A0K0K1A3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV10-1A0A0K0K1A3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV10-1A0A0K0K1A3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV10-1A0A0K0K1A3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV10-1A0A0K0K1A3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV10-1A0A0K0K1A3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV10-1A0A0K0K1A3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRBV10-1A0A0K0K1A3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRBV10-1A0A0K0K1A3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV10-1A0A0K0K1A3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRBV10-1A0A0K0K1A3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV10-1A0A0K0K1A3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV10-1A0A0K0K1A3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV10-1A0A0K0K1A3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV10-1A0A0K0K1A3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV10-1A0A0K0K1A3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV10-1A0A0K0K1A3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV10-1A0A0K0K1A3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV10-1A0A0K0K1A3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV10-1A0A0K0K1A3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV10-1A0A0K0K1A3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.59■□□□□ 0.89
TRBV10-1A0A0K0K1A3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.58■□□□□ 0.89
TRBV10-1A0A0K0K1A3 AC145285.7-201ENST00000614819 1539 ntBASIC20.57■□□□□ 0.88
TRBV10-1A0A0K0K1A3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV10-1A0A0K0K1A3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV10-1A0A0K0K1A3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV10-1A0A0K0K1A3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.5■□□□□ 0.87
TRBV10-1A0A0K0K1A3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.48■□□□□ 0.87
TRBV10-1A0A0K0K1A3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRBV10-1A0A0K0K1A3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV10-1A0A0K0K1A3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRBV10-1A0A0K0K1A3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV10-1A0A0K0K1A3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRBV10-1A0A0K0K1A3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRBV10-1A0A0K0K1A3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV10-1A0A0K0K1A3 AC015813.7-201ENST00000623294 581 ntBASIC20.39■□□□□ 0.85
TRBV10-1A0A0K0K1A3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRBV10-1A0A0K0K1A3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRBV10-1A0A0K0K1A3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRBV10-1A0A0K0K1A3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV10-1A0A0K0K1A3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.34■□□□□ 0.85
TRBV10-1A0A0K0K1A3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV10-1A0A0K0K1A3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV10-1A0A0K0K1A3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV10-1A0A0K0K1A3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms