Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV12-1A0A0B4J245 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRAV12-1A0A0B4J245 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV12-1A0A0B4J245 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TRAV12-1A0A0B4J245 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC20.44■□□□□ 0.86
TRAV12-1A0A0B4J245 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRAV12-1A0A0B4J245 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRAV12-1A0A0B4J245 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRAV12-1A0A0B4J245 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRAV12-1A0A0B4J245 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TRAV12-1A0A0B4J245 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAV12-1A0A0B4J245 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAV12-1A0A0B4J245 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRAV12-1A0A0B4J245 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAV12-1A0A0B4J245 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV12-1A0A0B4J245 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.32■□□□□ 0.84
TRAV12-1A0A0B4J245 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV12-1A0A0B4J245 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRAV12-1A0A0B4J245 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV12-1A0A0B4J245 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV12-1A0A0B4J245 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV12-1A0A0B4J245 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAV12-1A0A0B4J245 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRAV12-1A0A0B4J245 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRAV12-1A0A0B4J245 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV12-1A0A0B4J245 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV12-1A0A0B4J245 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV12-1A0A0B4J245 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV12-1A0A0B4J245 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV12-1A0A0B4J245 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV12-1A0A0B4J245 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV12-1A0A0B4J245 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
TRAV12-1A0A0B4J245 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV12-1A0A0B4J245 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV12-1A0A0B4J245 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV12-1A0A0B4J245 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV12-1A0A0B4J245 AC145285.7-201ENST00000614819 1539 ntBASIC20.17■□□□□ 0.82
TRAV12-1A0A0B4J245 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV12-1A0A0B4J245 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV12-1A0A0B4J245 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV12-1A0A0B4J245 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV12-1A0A0B4J245 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV12-1A0A0B4J245 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV12-1A0A0B4J245 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV12-1A0A0B4J245 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TRAV12-1A0A0B4J245 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.07■□□□□ 0.8
TRAV12-1A0A0B4J245 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV12-1A0A0B4J245 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV12-1A0A0B4J245 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV12-1A0A0B4J245 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV12-1A0A0B4J245 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV12-1A0A0B4J245 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV12-1A0A0B4J245 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV12-1A0A0B4J245 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV12-1A0A0B4J245 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAV12-1A0A0B4J245 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRAV12-1A0A0B4J245 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV12-1A0A0B4J245 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV12-1A0A0B4J245 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV12-1A0A0B4J245 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV12-1A0A0B4J245 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV12-1A0A0B4J245 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV12-1A0A0B4J245 AL161658.1-201ENST00000623641 1967 ntBASIC19.94■□□□□ 0.78
TRAV12-1A0A0B4J245 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV12-1A0A0B4J245 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV12-1A0A0B4J245 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV12-1A0A0B4J245 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV12-1A0A0B4J245 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV12-1A0A0B4J245 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV12-1A0A0B4J245 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV12-1A0A0B4J245 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV12-1A0A0B4J245 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV12-1A0A0B4J245 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV12-1A0A0B4J245 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV12-1A0A0B4J245 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV12-1A0A0B4J245 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV12-1A0A0B4J245 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV12-1A0A0B4J245 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV12-1A0A0B4J245 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV12-1A0A0B4J245 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV12-1A0A0B4J245 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV12-1A0A0B4J245 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV12-1A0A0B4J245 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV12-1A0A0B4J245 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV12-1A0A0B4J245 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV12-1A0A0B4J245 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV12-1A0A0B4J245 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV12-1A0A0B4J245 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV12-1A0A0B4J245 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV12-1A0A0B4J245 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV12-1A0A0B4J245 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV12-1A0A0B4J245 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV12-1A0A0B4J245 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV12-1A0A0B4J245 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV12-1A0A0B4J245 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV12-1A0A0B4J245 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV12-1A0A0B4J245 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV12-1A0A0B4J245 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV12-1A0A0B4J245 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV12-1A0A0B4J245 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms