Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHGB3Q9Y5G1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGB3Q9Y5G1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB3Q9Y5G1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB3Q9Y5G1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB3Q9Y5G1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB3Q9Y5G1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
PCDHGB3Q9Y5G1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGB3Q9Y5G1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB3Q9Y5G1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB3Q9Y5G1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 HSD17B1P1-201ENST00000590052 955 ntBASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGB3Q9Y5G1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB3Q9Y5G1 WHAMMP3-201ENST00000611636 1609 ntBASIC23.09■■□□□ 1.29
PCDHGB3Q9Y5G1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PCDHGB3Q9Y5G1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB3Q9Y5G1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB3Q9Y5G1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB3Q9Y5G1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB3Q9Y5G1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHGB3Q9Y5G1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
PCDHGB3Q9Y5G1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB3Q9Y5G1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB3Q9Y5G1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB3Q9Y5G1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
PCDHGB3Q9Y5G1 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.07■■□□□ 1.28
PCDHGB3Q9Y5G1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHGB3Q9Y5G1 AC148477.6-201ENST00000623746 465 ntBASIC23.07■■□□□ 1.28
PCDHGB3Q9Y5G1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB3Q9Y5G1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB3Q9Y5G1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB3Q9Y5G1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB3Q9Y5G1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB3Q9Y5G1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB3Q9Y5G1 AC020928.2-201ENST00000588717 2197 ntBASIC23.06■■□□□ 1.28
PCDHGB3Q9Y5G1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHGB3Q9Y5G1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB3Q9Y5G1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB3Q9Y5G1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDHGB3Q9Y5G1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHGB3Q9Y5G1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHGB3Q9Y5G1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHGB3Q9Y5G1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
PCDHGB3Q9Y5G1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PCDHGB3Q9Y5G1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB3Q9Y5G1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB3Q9Y5G1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB3Q9Y5G1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGB3Q9Y5G1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGB3Q9Y5G1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PCDHGB3Q9Y5G1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGB3Q9Y5G1 MIR219A2-201ENST00000608502 1504 ntBASIC23.03■■□□□ 1.28
PCDHGB3Q9Y5G1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB3Q9Y5G1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.02■■□□□ 1.28
PCDHGB3Q9Y5G1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.02■■□□□ 1.28
PCDHGB3Q9Y5G1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PCDHGB3Q9Y5G1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PCDHGB3Q9Y5G1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB3Q9Y5G1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHGB3Q9Y5G1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
PCDHGB3Q9Y5G1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHGB3Q9Y5G1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHGB3Q9Y5G1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB3Q9Y5G1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHGB3Q9Y5G1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHGB3Q9Y5G1 DUSP8P4-201ENST00000399538 1761 ntBASIC23.01■■□□□ 1.27
PCDHGB3Q9Y5G1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB3Q9Y5G1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23■■□□□ 1.27
PCDHGB3Q9Y5G1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB3Q9Y5G1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB3Q9Y5G1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23■■□□□ 1.27
PCDHGB3Q9Y5G1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDHGB3Q9Y5G1 AC092803.2-201ENST00000564287 1899 ntBASIC23■■□□□ 1.27
PCDHGB3Q9Y5G1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB3Q9Y5G1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGB3Q9Y5G1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGB3Q9Y5G1 AP004609.3-201ENST00000610705 1884 ntBASIC22.99■■□□□ 1.27
PCDHGB3Q9Y5G1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGB3Q9Y5G1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
PCDHGB3Q9Y5G1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGB3Q9Y5G1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
PCDHGB3Q9Y5G1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.98■■□□□ 1.27
PCDHGB3Q9Y5G1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB3Q9Y5G1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB3Q9Y5G1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB3Q9Y5G1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB3Q9Y5G1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 731.3 ms