RNA–Protein interactions for RNA: ENST00000320895.9

CLPTM1L-201, Transcript of CLPTM1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1L, Length 2,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-201ENST00000320895 NISCHQ9Y2I1 1504 aa51.41■■■■■ 5.82
CLPTM1L-201ENST00000320895 CCDC180Q9P1Z9 1646 aa44.54■■■■■ 4.72
CLPTM1L-201ENST00000320895 SHROOM4Q9ULL8 1493 aa43.59■■■■■ 4.57
CLPTM1L-201ENST00000320895 ZCCHC6Q5VYS8 1495 aaKnown RBP43.15■■■■■ 4.5
CLPTM1L-201ENST00000320895 DCAF8L2P0C7V8 631 aa43.13■■■■■ 4.49
CLPTM1L-201ENST00000320895 ABCC9O60706 1549 aa42.66■■■■■ 4.42
CLPTM1L-201ENST00000320895 SUPT5HO00267 1087 aaKnown RBP42.59■■■■■ 4.41
CLPTM1L-201ENST00000320895 DCAF1Q9Y4B6 1507 aa42.17■■■■■ 4.34
CLPTM1L-201ENST00000320895 MYO15BQ96JP2 1530 aa41.55■■■■■ 4.24
CLPTM1L-201ENST00000320895 NACADO15069 1562 aa41.53■■■■■ 4.24
CLPTM1L-201ENST00000320895 SCRIBQ14160 1630 aa41.48■■■■■ 4.23
CLPTM1L-201ENST00000320895 RB1CC1Q8TDY2 1594 aa41.25■■■■■ 4.19
CLPTM1L-201ENST00000320895 CHIC1Q5VXU3 224 aa41.05■■■■■ 4.16
CLPTM1L-201ENST00000320895 UNC13AQ9UPW8 1703 aa40.61■■■■■ 4.09
CLPTM1L-201ENST00000320895 PABPN1Q86U42 306 aaKnown RBP eCLIP40.43■■■■■ 4.06
CLPTM1L-201ENST00000320895 CECR2Q9BXF3 1484 aa40.21■■■■■ 4.03
CLPTM1L-201ENST00000320895 BICRAQ9NZM4 1560 aa40.14■■■■■ 4.02
CLPTM1L-201ENST00000320895 RSF1Q96T23 1441 aaPredicted RBP40.13■■■■■ 4.02
CLPTM1L-201ENST00000320895 LOC105371045A0A1W2PR82 267 aa40.07■■■■■ 4
CLPTM1L-201ENST00000320895 MROH2BQ7Z745 1585 aa39.9■■■■□ 3.98
CLPTM1L-201ENST00000320895 PCGF6Q9BYE7 350 aa39.68■■■■□ 3.94
CLPTM1L-201ENST00000320895 WIZO95785 1651 aa39.63■■■■□ 3.93
CLPTM1L-201ENST00000320895 BAZ1AQ9NRL2 1556 aaPredicted RBP39.62■■■■□ 3.93
CLPTM1L-201ENST00000320895 SMARCA4P51532 1647 aa39.52■■■■□ 3.92
CLPTM1L-201ENST00000320895 TRIM41Q8WV44 630 aa39.51■■■■□ 3.92
CLPTM1L-201ENST00000320895 FAM9AQ8IZU1 332 aaPredicted RBP39.47■■■■□ 3.91
CLPTM1L-201ENST00000320895 EHMT2Q96KQ7 1210 aa39.37■■■■□ 3.89
CLPTM1L-201ENST00000320895 HRCP23327 699 aa39.23■■■■□ 3.87
CLPTM1L-201ENST00000320895 TOP2AP11388 1531 aaKnown RBP38.96■■■■□ 3.83
CLPTM1L-201ENST00000320895 EIF4G1Q04637 1599 aaKnown RBP38.93■■■■□ 3.82
CLPTM1L-201ENST00000320895 ATAD2BQ9ULI0 1458 aa38.89■■■■□ 3.82
CLPTM1L-201ENST00000320895 PPARGC1BQ86YN6 1023 aaKnown RBP38.84■■■■□ 3.81
CLPTM1L-201ENST00000320895 PEG3Q9GZU2 1588 aa38.8■■■■□ 3.8
CLPTM1L-201ENST00000320895 CCDC88BA6NC98 1476 aa38.74■■■■□ 3.79
CLPTM1L-201ENST00000320895 TRIM26Q12899 539 aaPredicted RBP38.72■■■■□ 3.79
CLPTM1L-201ENST00000320895 SMARCA2P51531 1590 aa38.71■■■■□ 3.79
CLPTM1L-201ENST00000320895 BAZ1BQ9UIG0 1483 aaKnown RBP38.71■■■■□ 3.79
CLPTM1L-201ENST00000320895 ABCC8Q09428 1581 aa38.45■■■■□ 3.75
CLPTM1L-201ENST00000320895 CC2D2AQ9P2K1 1620 aa38.41■■■■□ 3.74
CLPTM1L-201ENST00000320895 NCAPD3P42695 1498 aa38.39■■■■□ 3.74
CLPTM1L-201ENST00000320895 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
CLPTM1L-201ENST00000320895 SOGA1O94964 1423 aa38.06■■■■□ 3.68
CLPTM1L-201ENST00000320895 TTBK1Q5TCY1 1321 aaPredicted RBP37.96■■■■□ 3.67
CLPTM1L-201ENST00000320895 RUSC2Q8N2Y8 1516 aa37.92■■■■□ 3.66
CLPTM1L-201ENST00000320895 DNAJC5BQ9UF47 199 aa37.89■■■■□ 3.66
CLPTM1L-201ENST00000320895 UBTFP17480 764 aaKnown RBP37.76■■■■□ 3.63
CLPTM1L-201ENST00000320895 CSRNP3Q8WYN3 585 aa37.76■■■■□ 3.63
CLPTM1L-201ENST00000320895 WRNQ14191 1432 aaPredicted RBP eCLIP37.7■■■■□ 3.63
CLPTM1L-201ENST00000320895 CEP162Q5TB80 1403 aa37.63■■■■□ 3.62
CLPTM1L-201ENST00000320895 CFTRP13569 1480 aa37.62■■■■□ 3.61
CLPTM1L-201ENST00000320895 SYNJ1O43426 1573 aa37.57■■■■□ 3.61
CLPTM1L-201ENST00000320895 ZEB1P37275 1124 aaPredicted RBP37.55■■■■□ 3.6
CLPTM1L-201ENST00000320895 CADPSQ9ULU8 1353 aa37.55■■■■□ 3.6
CLPTM1L-201ENST00000320895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.52■■■■□ 3.6
CLPTM1L-201ENST00000320895 NESP48681 1621 aa37.49■■■■□ 3.59
CLPTM1L-201ENST00000320895 TNIKQ9UKE5 1360 aa37.49■■■■□ 3.59
CLPTM1L-201ENST00000320895 EEA1Q15075 1411 aa37.41■■■■□ 3.58
CLPTM1L-201ENST00000320895 RANGAP1P46060 587 aaPredicted RBP37.4■■■■□ 3.58
CLPTM1L-201ENST00000320895 PRDM2Q13029 1718 aa37.32■■■■□ 3.57
CLPTM1L-201ENST00000320895 GOLGA3Q08378 1498 aa37.32■■■■□ 3.56
CLPTM1L-201ENST00000320895 CCER1Q8TC90 406 aaPredicted RBP37.29■■■■□ 3.56
CLPTM1L-201ENST00000320895 CUX1P39880 1505 aa37.26■■■■□ 3.56
CLPTM1L-201ENST00000320895 TOP2BQ02880 1626 aa37.23■■■■□ 3.55
CLPTM1L-201ENST00000320895 FANCD2Q9BXW9 1451 aa37.2■■■■□ 3.55
CLPTM1L-201ENST00000320895 BIVM-ERCC5R4GMW8 1640 aa37.14■■■■□ 3.54
CLPTM1L-201ENST00000320895 CEP164Q9UPV0 1460 aa37.11■■■■□ 3.53
CLPTM1L-201ENST00000320895 RAPGEF2Q9Y4G8 1499 aa37.07■■■■□ 3.53
CLPTM1L-201ENST00000320895 LAMC3Q9Y6N6 1575 aa37.06■■■■□ 3.52
CLPTM1L-201ENST00000320895 CLIP1P30622 1438 aa37■■■■□ 3.51
CLPTM1L-201ENST00000320895 KIF21BO75037 1637 aa36.95■■■■□ 3.51
CLPTM1L-201ENST00000320895 KIF21AQ7Z4S6 1674 aa36.88■■■■□ 3.49
CLPTM1L-201ENST00000320895 PDS5BQ9NTI5 1447 aa36.86■■■■□ 3.49
CLPTM1L-201ENST00000320895 FGD5Q6ZNL6 1462 aa36.86■■■■□ 3.49
CLPTM1L-201ENST00000320895 HNRNPUL2Q1KMD3 747 aaKnown RBP36.84■■■■□ 3.49
CLPTM1L-201ENST00000320895 TOPBP1Q92547 1522 aa36.78■■■■□ 3.48
CLPTM1L-201ENST00000320895 URB2Q14146 1524 aaKnown RBP36.76■■■■□ 3.48
CLPTM1L-201ENST00000320895 DNMBPQ6XZF7 1577 aa36.75■■■■□ 3.47
CLPTM1L-201ENST00000320895 APLP2Q06481 763 aa36.73■■■■□ 3.47
CLPTM1L-201ENST00000320895 VPS8Q8N3P4 1428 aa36.71■■■■□ 3.47
CLPTM1L-201ENST00000320895 RAD54L2Q9Y4B4 1467 aa36.7■■■■□ 3.47
CLPTM1L-201ENST00000320895 CUX2O14529 1486 aa36.68■■■■□ 3.46
CLPTM1L-201ENST00000320895 KIF27Q86VH2 1401 aa36.64■■■■□ 3.46
CLPTM1L-201ENST00000320895 POLA1P09884 1462 aaPredicted RBP36.64■■■■□ 3.46
CLPTM1L-201ENST00000320895 PRXQ9BXM0 1461 aa36.57■■■■□ 3.44
CLPTM1L-201ENST00000320895 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
CLPTM1L-201ENST00000320895 KANK4Q5T7N3 995 aaPredicted RBP36.42■■■■□ 3.42
CLPTM1L-201ENST00000320895 MRC2Q9UBG0 1479 aa36.42■■■■□ 3.42
CLPTM1L-201ENST00000320895 ARAP1Q96P48 1450 aa36.39■■■■□ 3.42
CLPTM1L-201ENST00000320895 ERICH3Q5RHP9 1530 aa36.39■■■■□ 3.42
CLPTM1L-201ENST00000320895 IGF1RP08069 1367 aa36.39■■■■□ 3.42
CLPTM1L-201ENST00000320895 TDRD9Q8NDG6 1382 aaKnown RBP36.37■■■■□ 3.41
CLPTM1L-201ENST00000320895 ABCA10Q8WWZ4 1543 aa36.36■■■■□ 3.41
CLPTM1L-201ENST00000320895 DIEXFQ68CQ4 756 aaKnown RBP36.33■■■■□ 3.41
CLPTM1L-201ENST00000320895 WDR97A6NE52 1622 aa36.22■■■■□ 3.39
CLPTM1L-201ENST00000320895 CARMIL1Q5VZK9 1371 aa36.22■■■■□ 3.39
CLPTM1L-201ENST00000320895 TARBP1Q13395 1621 aaKnown RBP36.17■■■■□ 3.38
CLPTM1L-201ENST00000320895 WDR62O43379 1518 aa36.15■■■■□ 3.38
CLPTM1L-201ENST00000320895 ARHGAP35Q9NRY4 1499 aa36.15■■■■□ 3.38
CLPTM1L-201ENST00000320895 THOC2Q8NI27 1593 aaKnown RBP36.11■■■■□ 3.37
CLPTM1L-201ENST00000320895 GAPVD1Q14C86 1478 aa36.11■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms