RNA–Protein interactions for RNA: ENST00000610705.1

AP004609.3-201, humanhuman

BASIC

Gene AP004609.3, Length 1,884 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.3-201ENST00000610705 NISCHQ9Y2I1 1504 aa55.95■■■■■ 6.55
AP004609.3-201ENST00000610705 CCDC180Q9P1Z9 1646 aa48.81■■■■■ 5.4
AP004609.3-201ENST00000610705 ZCCHC6Q5VYS8 1495 aaKnown RBP46.98■■■■■ 5.11
AP004609.3-201ENST00000610705 DCAF8L2P0C7V8 631 aa46.39■■■■■ 5.02
AP004609.3-201ENST00000610705 ABCC9O60706 1549 aa46.32■■■■■ 5.01
AP004609.3-201ENST00000610705 DCAF1Q9Y4B6 1507 aa46.22■■■■■ 4.99
AP004609.3-201ENST00000610705 SHROOM4Q9ULL8 1493 aa45.71■■■■■ 4.91
AP004609.3-201ENST00000610705 MYO15BQ96JP2 1530 aa45.69■■■■■ 4.91
AP004609.3-201ENST00000610705 NACADO15069 1562 aa45.5■■■■■ 4.87
AP004609.3-201ENST00000610705 RB1CC1Q8TDY2 1594 aa45.15■■■■■ 4.82
AP004609.3-201ENST00000610705 SCRIBQ14160 1630 aa44.96■■■■■ 4.79
AP004609.3-201ENST00000610705 UNC13AQ9UPW8 1703 aa44.2■■■■■ 4.67
AP004609.3-201ENST00000610705 SUPT5HO00267 1087 aaKnown RBP43.94■■■■■ 4.62
AP004609.3-201ENST00000610705 BICRAQ9NZM4 1560 aa43.76■■■■■ 4.6
AP004609.3-201ENST00000610705 PABPN1Q86U42 306 aaKnown RBP eCLIP43.69■■■■■ 4.58
AP004609.3-201ENST00000610705 CECR2Q9BXF3 1484 aa43.51■■■■■ 4.56
AP004609.3-201ENST00000610705 RSF1Q96T23 1441 aaPredicted RBP43.39■■■■■ 4.54
AP004609.3-201ENST00000610705 MROH2BQ7Z745 1585 aa43.25■■■■■ 4.51
AP004609.3-201ENST00000610705 BAZ1AQ9NRL2 1556 aaPredicted RBP43.23■■■■■ 4.51
AP004609.3-201ENST00000610705 SMARCA4P51532 1647 aa43.05■■■■■ 4.48
AP004609.3-201ENST00000610705 WIZO95785 1651 aa42.9■■■■■ 4.46
AP004609.3-201ENST00000610705 EIF4G1Q04637 1599 aaKnown RBP42.47■■■■■ 4.39
AP004609.3-201ENST00000610705 PEG3Q9GZU2 1588 aa42.47■■■■■ 4.39
AP004609.3-201ENST00000610705 TOP2AP11388 1531 aaKnown RBP42.44■■■■■ 4.38
AP004609.3-201ENST00000610705 ATAD2BQ9ULI0 1458 aa42.36■■■■■ 4.37
AP004609.3-201ENST00000610705 SMARCA2P51531 1590 aa42.34■■■■■ 4.37
AP004609.3-201ENST00000610705 BAZ1BQ9UIG0 1483 aaKnown RBP42.15■■■■■ 4.34
AP004609.3-201ENST00000610705 CCDC88BA6NC98 1476 aa42.02■■■■■ 4.32
AP004609.3-201ENST00000610705 NCAPD3P42695 1498 aa41.99■■■■■ 4.31
AP004609.3-201ENST00000610705 CHIC1Q5VXU3 224 aa41.96■■■■■ 4.31
AP004609.3-201ENST00000610705 HMGXB3Q12766 1538 aa41.92■■■■■ 4.3
AP004609.3-201ENST00000610705 CC2D2AQ9P2K1 1620 aa41.88■■■■■ 4.29
AP004609.3-201ENST00000610705 TRIM41Q8WV44 630 aa41.3■■■■■ 4.2
AP004609.3-201ENST00000610705 ABCC8Q09428 1581 aa41.13■■■■■ 4.18
AP004609.3-201ENST00000610705 CFTRP13569 1480 aa41.04■■■■■ 4.16
AP004609.3-201ENST00000610705 CADPSQ9ULU8 1353 aa40.94■■■■■ 4.14
AP004609.3-201ENST00000610705 DNAJC5BQ9UF47 199 aa40.88■■■■■ 4.14
AP004609.3-201ENST00000610705 WRNQ14191 1432 aaPredicted RBP eCLIP40.87■■■■■ 4.13
AP004609.3-201ENST00000610705 PRDM2Q13029 1718 aa40.81■■■■■ 4.12
AP004609.3-201ENST00000610705 SYNJ1O43426 1573 aa40.69■■■■■ 4.1
AP004609.3-201ENST00000610705 NESP48681 1621 aa40.62■■■■■ 4.09
AP004609.3-201ENST00000610705 FAM9AQ8IZU1 332 aaPredicted RBP40.59■■■■■ 4.09
AP004609.3-201ENST00000610705 LAMC3Q9Y6N6 1575 aa40.59■■■■■ 4.09
AP004609.3-201ENST00000610705 TOP2BQ02880 1626 aa40.52■■■■■ 4.08
AP004609.3-201ENST00000610705 FANCD2Q9BXW9 1451 aa40.5■■■■■ 4.07
AP004609.3-201ENST00000610705 BIVM-ERCC5R4GMW8 1640 aa40.47■■■■■ 4.07
AP004609.3-201ENST00000610705 CUX1P39880 1505 aa40.44■■■■■ 4.06
AP004609.3-201ENST00000610705 LOC105371045A0A1W2PR82 267 aa40.38■■■■■ 4.05
AP004609.3-201ENST00000610705 SOGA1O94964 1423 aa40.34■■■■■ 4.05
AP004609.3-201ENST00000610705 PDS5BQ9NTI5 1447 aa40.31■■■■■ 4.04
AP004609.3-201ENST00000610705 CEP164Q9UPV0 1460 aa40.26■■■■■ 4.04
AP004609.3-201ENST00000610705 EEA1Q15075 1411 aa40.22■■■■■ 4.03
AP004609.3-201ENST00000610705 RUSC2Q8N2Y8 1516 aa40.19■■■■■ 4.02
AP004609.3-201ENST00000610705 KIF21AQ7Z4S6 1674 aa40.11■■■■■ 4.01
AP004609.3-201ENST00000610705 DNMBPQ6XZF7 1577 aa40.11■■■■■ 4.01
AP004609.3-201ENST00000610705 EHMT2Q96KQ7 1210 aa40.07■■■■■ 4
AP004609.3-201ENST00000610705 CSRNP3Q8WYN3 585 aa40.05■■■■■ 4
AP004609.3-201ENST00000610705 TOPBP1Q92547 1522 aa40.04■■■■■ 4
AP004609.3-201ENST00000610705 FGD5Q6ZNL6 1462 aa40.03■■■■■ 4
AP004609.3-201ENST00000610705 URB2Q14146 1524 aaKnown RBP39.98■■■■□ 3.99
AP004609.3-201ENST00000610705 KIF27Q86VH2 1401 aa39.85■■■■□ 3.97
AP004609.3-201ENST00000610705 POLA1P09884 1462 aaPredicted RBP39.84■■■■□ 3.97
AP004609.3-201ENST00000610705 MRC2Q9UBG0 1479 aa39.79■■■■□ 3.96
AP004609.3-201ENST00000610705 CUX2O14529 1486 aa39.78■■■■□ 3.96
AP004609.3-201ENST00000610705 ERCC6Q03468 1493 aa39.75■■■■□ 3.95
AP004609.3-201ENST00000610705 RAD54L2Q9Y4B4 1467 aa39.74■■■■□ 3.95
AP004609.3-201ENST00000610705 KIF21BO75037 1637 aa39.7■■■■□ 3.95
AP004609.3-201ENST00000610705 GOLGA3Q08378 1498 aa39.69■■■■□ 3.94
AP004609.3-201ENST00000610705 ABCA10Q8WWZ4 1543 aa39.65■■■■□ 3.94
AP004609.3-201ENST00000610705 UBTFP17480 764 aaKnown RBP39.58■■■■□ 3.93
AP004609.3-201ENST00000610705 WDR62O43379 1518 aa39.56■■■■□ 3.92
AP004609.3-201ENST00000610705 TNIKQ9UKE5 1360 aa39.53■■■■□ 3.92
AP004609.3-201ENST00000610705 PRXQ9BXM0 1461 aa39.52■■■■□ 3.92
AP004609.3-201ENST00000610705 RAPGEF2Q9Y4G8 1499 aa39.52■■■■□ 3.92
AP004609.3-201ENST00000610705 WDR97A6NE52 1622 aa39.51■■■■□ 3.92
AP004609.3-201ENST00000610705 IGF1RP08069 1367 aa39.48■■■■□ 3.91
AP004609.3-201ENST00000610705 THOC2Q8NI27 1593 aaKnown RBP39.46■■■■□ 3.91
AP004609.3-201ENST00000610705 ERICH3Q5RHP9 1530 aa39.44■■■■□ 3.9
AP004609.3-201ENST00000610705 TARBP1Q13395 1621 aaKnown RBP39.42■■■■□ 3.9
AP004609.3-201ENST00000610705 TDRD9Q8NDG6 1382 aaKnown RBP39.37■■■■□ 3.89
AP004609.3-201ENST00000610705 CEP162Q5TB80 1403 aa39.34■■■■□ 3.89
AP004609.3-201ENST00000610705 ABCA5Q8WWZ7 1642 aa39.33■■■■□ 3.89
AP004609.3-201ENST00000610705 CARMIL1Q5VZK9 1371 aa39.31■■■■□ 3.88
AP004609.3-201ENST00000610705 GAPVD1Q14C86 1478 aa39.29■■■■□ 3.88
AP004609.3-201ENST00000610705 IFT140Q96RY7 1462 aa39.29■■■■□ 3.88
AP004609.3-201ENST00000610705 CUL7Q14999 1698 aa39.19■■■■□ 3.86
AP004609.3-201ENST00000610705 AQRO60306 1485 aaKnown RBP eCLIP39.12■■■■□ 3.85
AP004609.3-201ENST00000610705 ZNF608Q9ULD9 1512 aaPredicted RBP39.08■■■■□ 3.85
AP004609.3-201ENST00000610705 CLIP1P30622 1438 aa39.07■■■■□ 3.84
AP004609.3-201ENST00000610705 PBRM1Q86U86 1689 aa39.06■■■■□ 3.84
AP004609.3-201ENST00000610705 RANGAP1P46060 587 aaPredicted RBP39.02■■■■□ 3.84
AP004609.3-201ENST00000610705 GRIN2BQ13224 1484 aa38.99■■■■□ 3.83
AP004609.3-201ENST00000610705 EIF4G3O43432 1585 aaKnown RBP38.95■■■■□ 3.83
AP004609.3-201ENST00000610705 FHAD1B1AJZ9 1412 aa38.85■■■■□ 3.81
AP004609.3-201ENST00000610705 ADAMTS12P58397 1594 aa38.84■■■■□ 3.81
AP004609.3-201ENST00000610705 SNAPC4Q5SXM2 1469 aa38.76■■■■□ 3.8
AP004609.3-201ENST00000610705 CTTNBP2Q8WZ74 1663 aa38.74■■■■□ 3.79
AP004609.3-201ENST00000610705 VPS8Q8N3P4 1428 aa38.69■■■■□ 3.78
AP004609.3-201ENST00000610705 ARHGAP35Q9NRY4 1499 aa38.68■■■■□ 3.78
AP004609.3-201ENST00000610705 ARAP1Q96P48 1450 aa38.67■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms