RNA–Protein interactions for RNA: ENST00000377759.8

SNX5-201, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,270 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-201ENST00000377759 NISCHQ9Y2I1 1504 aa51.11■■■■■ 5.77
SNX5-201ENST00000377759 CCDC180Q9P1Z9 1646 aa43.68■■■■■ 4.58
SNX5-201ENST00000377759 ZCCHC6Q5VYS8 1495 aaKnown RBP43.18■■■■■ 4.5
SNX5-201ENST00000377759 SHROOM4Q9ULL8 1493 aa43.01■■■■■ 4.48
SNX5-201ENST00000377759 DCAF8L2P0C7V8 631 aa42.12■■■■■ 4.33
SNX5-201ENST00000377759 DCAF1Q9Y4B6 1507 aa42.06■■■■■ 4.32
SNX5-201ENST00000377759 SUPT5HO00267 1087 aaKnown RBP42.02■■■■■ 4.32
SNX5-201ENST00000377759 MYO15BQ96JP2 1530 aa41.01■■■■■ 4.16
SNX5-201ENST00000377759 CHIC1Q5VXU3 224 aa40.85■■■■■ 4.13
SNX5-201ENST00000377759 SCRIBQ14160 1630 aa40.7■■■■■ 4.11
SNX5-201ENST00000377759 ABCC9O60706 1549 aa40.65■■■■■ 4.1
SNX5-201ENST00000377759 NACADO15069 1562 aa40.45■■■■■ 4.07
SNX5-201ENST00000377759 RSF1Q96T23 1441 aaPredicted RBP40.28■■■■■ 4.04
SNX5-201ENST00000377759 CECR2Q9BXF3 1484 aa39.82■■■■□ 3.97
SNX5-201ENST00000377759 RB1CC1Q8TDY2 1594 aa39.81■■■■□ 3.96
SNX5-201ENST00000377759 MROH2BQ7Z745 1585 aa39.67■■■■□ 3.94
SNX5-201ENST00000377759 LOC105371045A0A1W2PR82 267 aa39.51■■■■□ 3.92
SNX5-201ENST00000377759 WIZO95785 1651 aa39.41■■■■□ 3.9
SNX5-201ENST00000377759 BAZ1AQ9NRL2 1556 aaPredicted RBP39.26■■■■□ 3.88
SNX5-201ENST00000377759 TRIM41Q8WV44 630 aa39.24■■■■□ 3.87
SNX5-201ENST00000377759 UNC13AQ9UPW8 1703 aa39.21■■■■□ 3.87
SNX5-201ENST00000377759 PCGF6Q9BYE7 350 aa39.05■■■■□ 3.84
SNX5-201ENST00000377759 SMARCA4P51532 1647 aa38.98■■■■□ 3.83
SNX5-201ENST00000377759 HRCP23327 699 aa38.91■■■■□ 3.82
SNX5-201ENST00000377759 TOP2AP11388 1531 aaKnown RBP38.86■■■■□ 3.81
SNX5-201ENST00000377759 EIF4G1Q04637 1599 aaKnown RBP38.85■■■■□ 3.81
SNX5-201ENST00000377759 BICRAQ9NZM4 1560 aa38.79■■■■□ 3.8
SNX5-201ENST00000377759 FAM9AQ8IZU1 332 aaPredicted RBP38.79■■■■□ 3.8
SNX5-201ENST00000377759 PABPN1Q86U42 306 aaKnown RBP eCLIP38.66■■■■□ 3.78
SNX5-201ENST00000377759 CCDC88BA6NC98 1476 aa38.65■■■■□ 3.78
SNX5-201ENST00000377759 SMARCA2P51531 1590 aa38.62■■■■□ 3.77
SNX5-201ENST00000377759 TRIM26Q12899 539 aaPredicted RBP38.51■■■■□ 3.76
SNX5-201ENST00000377759 PEG3Q9GZU2 1588 aa38.35■■■■□ 3.73
SNX5-201ENST00000377759 ABCC8Q09428 1581 aa38.35■■■■□ 3.73
SNX5-201ENST00000377759 EHMT2Q96KQ7 1210 aa38.34■■■■□ 3.73
SNX5-201ENST00000377759 ATAD2BQ9ULI0 1458 aa38.07■■■■□ 3.69
SNX5-201ENST00000377759 PPARGC1BQ86YN6 1023 aaKnown RBP38.05■■■■□ 3.68
SNX5-201ENST00000377759 SOGA1O94964 1423 aa37.94■■■■□ 3.66
SNX5-201ENST00000377759 BAZ1BQ9UIG0 1483 aaKnown RBP37.89■■■■□ 3.66
SNX5-201ENST00000377759 WRNQ14191 1432 aaPredicted RBP eCLIP37.8■■■■□ 3.646e-6■■■□□ 16.7
SNX5-201ENST00000377759 EEA1Q15075 1411 aa37.78■■■■□ 3.64
SNX5-201ENST00000377759 RUSC2Q8N2Y8 1516 aa37.78■■■■□ 3.64
SNX5-201ENST00000377759 CSRNP3Q8WYN3 585 aa37.7■■■■□ 3.63
SNX5-201ENST00000377759 SYNJ1O43426 1573 aa37.65■■■■□ 3.62
SNX5-201ENST00000377759 TNIKQ9UKE5 1360 aa37.63■■■■□ 3.61
SNX5-201ENST00000377759 CEP162Q5TB80 1403 aa37.6■■■■□ 3.61
SNX5-201ENST00000377759 ZEB1P37275 1124 aaPredicted RBP37.5■■■■□ 3.59
SNX5-201ENST00000377759 NCAPD3P42695 1498 aa37.45■■■■□ 3.59
SNX5-201ENST00000377759 GOLGA3Q08378 1498 aa37.45■■■■□ 3.59
SNX5-201ENST00000377759 HMGXB3Q12766 1538 aa37.41■■■■□ 3.58
SNX5-201ENST00000377759 UBTFP17480 764 aaKnown RBP37.39■■■■□ 3.58
SNX5-201ENST00000377759 KIF21BO75037 1637 aa37.29■■■■□ 3.56
SNX5-201ENST00000377759 CEP164Q9UPV0 1460 aa37.29■■■■□ 3.56
SNX5-201ENST00000377759 TOP2BQ02880 1626 aa37.26■■■■□ 3.56
SNX5-201ENST00000377759 BIVM-ERCC5R4GMW8 1640 aa37.15■■■■□ 3.54
SNX5-201ENST00000377759 RAPGEF2Q9Y4G8 1499 aa37.05■■■■□ 3.52
SNX5-201ENST00000377759 TTBK1Q5TCY1 1321 aaPredicted RBP37.03■■■■□ 3.52
SNX5-201ENST00000377759 CFTRP13569 1480 aa37.02■■■■□ 3.52
SNX5-201ENST00000377759 CLIP1P30622 1438 aa36.98■■■■□ 3.51
SNX5-201ENST00000377759 CUX1P39880 1505 aa36.97■■■■□ 3.51
SNX5-201ENST00000377759 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.96■■■■□ 3.51
SNX5-201ENST00000377759 CCER1Q8TC90 406 aaPredicted RBP36.82■■■■□ 3.48
SNX5-201ENST00000377759 PRXQ9BXM0 1461 aa36.82■■■■□ 3.48
SNX5-201ENST00000377759 VPS8Q8N3P4 1428 aa36.81■■■■□ 3.48
SNX5-201ENST00000377759 ERICH3Q5RHP9 1530 aa36.77■■■■□ 3.48
SNX5-201ENST00000377759 PRDM2Q13029 1718 aa36.7■■■■□ 3.47
SNX5-201ENST00000377759 KIF27Q86VH2 1401 aa36.67■■■■□ 3.46
SNX5-201ENST00000377759 CADPSQ9ULU8 1353 aa36.64■■■■□ 3.46
SNX5-201ENST00000377759 CC2D2AQ9P2K1 1620 aa36.6■■■■□ 3.45
SNX5-201ENST00000377759 RANGAP1P46060 587 aaPredicted RBP36.6■■■■□ 3.45
SNX5-201ENST00000377759 ARAP1Q96P48 1450 aa36.48■■■■□ 3.43
SNX5-201ENST00000377759 APLP2Q06481 763 aa36.46■■■■□ 3.43
SNX5-201ENST00000377759 CUX2O14529 1486 aa36.37■■■■□ 3.41
SNX5-201ENST00000377759 IGF1RP08069 1367 aa36.35■■■■□ 3.41
SNX5-201ENST00000377759 FGD5Q6ZNL6 1462 aa36.33■■■■□ 3.41
SNX5-201ENST00000377759 HNRNPUL2Q1KMD3 747 aaKnown RBP36.32■■■■□ 3.4
SNX5-201ENST00000377759 FANCD2Q9BXW9 1451 aa36.26■■■■□ 3.39
SNX5-201ENST00000377759 ARHGAP35Q9NRY4 1499 aa36.23■■■■□ 3.39
SNX5-201ENST00000377759 KANK4Q5T7N3 995 aaPredicted RBP36.17■■■■□ 3.38
SNX5-201ENST00000377759 CARMIL1Q5VZK9 1371 aa36.14■■■■□ 3.38
SNX5-201ENST00000377759 NESP48681 1621 aa36.08■■■■□ 3.37
SNX5-201ENST00000377759 DNMBPQ6XZF7 1577 aa36.07■■■■□ 3.36
SNX5-201ENST00000377759 TOPBP1Q92547 1522 aa36.01■■■■□ 3.36
SNX5-201ENST00000377759 RAD54L2Q9Y4B4 1467 aa35.98■■■■□ 3.35
SNX5-201ENST00000377759 POLA1P09884 1462 aaPredicted RBP35.97■■■■□ 3.35
SNX5-201ENST00000377759 ABCA10Q8WWZ4 1543 aa35.96■■■■□ 3.35
SNX5-201ENST00000377759 RRBP1Q9P2E9 1410 aaKnown RBP35.93■■■■□ 3.34
SNX5-201ENST00000377759 DIEXFQ68CQ4 756 aaKnown RBP35.92■■■■□ 3.34
SNX5-201ENST00000377759 LAMC3Q9Y6N6 1575 aa35.86■■■■□ 3.33
SNX5-201ENST00000377759 ZNF316A6NFI3 1004 aaPredicted RBP35.81■■■■□ 3.32
SNX5-201ENST00000377759 MAP3K1Q13233 1512 aa35.79■■■■□ 3.32
SNX5-201ENST00000377759 URB2Q14146 1524 aaKnown RBP35.78■■■■□ 3.32
SNX5-201ENST00000377759 TIAM1Q13009 1591 aa35.76■■■■□ 3.32
SNX5-201ENST00000377759 CCNB3Q8WWL7 1395 aa35.74■■■■□ 3.31
SNX5-201ENST00000377759 DHX57Q6P158 1386 aaKnown RBP35.72■■■■□ 3.31
SNX5-201ENST00000377759 DNAJC5BQ9UF47 199 aa35.72■■■■□ 3.31
SNX5-201ENST00000377759 CUL7Q14999 1698 aa35.69■■■■□ 3.3
SNX5-201ENST00000377759 WDR97A6NE52 1622 aa35.67■■■■□ 3.3
SNX5-201ENST00000377759 CLSPNQ9HAW4 1339 aa35.66■■■■□ 3.3
SNX5-201ENST00000377759 FHAD1B1AJZ9 1412 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms