RNA–Protein interactions for RNA: ENST00000392035.6

C19orf47-202, Transcript of chromosome 19 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C19orf47, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-202ENST00000392035 NISCHQ9Y2I1 1504 aa55.12■■■■■ 6.41
C19orf47-202ENST00000392035 CCDC180Q9P1Z9 1646 aa47.9■■■■■ 5.26
C19orf47-202ENST00000392035 ZCCHC6Q5VYS8 1495 aaKnown RBP46.36■■■■■ 5.01
C19orf47-202ENST00000392035 DCAF1Q9Y4B6 1507 aa45.53■■■■■ 4.88
C19orf47-202ENST00000392035 DCAF8L2P0C7V8 631 aa45.51■■■■■ 4.88
C19orf47-202ENST00000392035 SHROOM4Q9ULL8 1493 aa45.24■■■■■ 4.83
C19orf47-202ENST00000392035 ABCC9O60706 1549 aa45.14■■■■■ 4.82
C19orf47-202ENST00000392035 MYO15BQ96JP2 1530 aa44.87■■■■■ 4.77
C19orf47-202ENST00000392035 NACADO15069 1562 aa44.55■■■■■ 4.72
C19orf47-202ENST00000392035 SCRIBQ14160 1630 aa44.17■■■■■ 4.66
C19orf47-202ENST00000392035 RB1CC1Q8TDY2 1594 aa44.12■■■■■ 4.65
C19orf47-202ENST00000392035 SUPT5HO00267 1087 aaKnown RBP43.65■■■■■ 4.58
C19orf47-202ENST00000392035 UNC13AQ9UPW8 1703 aa43.32■■■■■ 4.53
C19orf47-202ENST00000392035 RSF1Q96T23 1441 aaPredicted RBP42.88■■■■■ 4.46
C19orf47-202ENST00000392035 CECR2Q9BXF3 1484 aa42.86■■■■■ 4.45
C19orf47-202ENST00000392035 BICRAQ9NZM4 1560 aa42.83■■■■■ 4.45
C19orf47-202ENST00000392035 PABPN1Q86U42 306 aaKnown RBP eCLIP42.65■■■■■ 4.42
C19orf47-202ENST00000392035 MROH2BQ7Z745 1585 aa42.63■■■■■ 4.41
C19orf47-202ENST00000392035 BAZ1AQ9NRL2 1556 aaPredicted RBP42.52■■■■■ 4.4
C19orf47-202ENST00000392035 SMARCA4P51532 1647 aa42.32■■■■■ 4.37
C19orf47-202ENST00000392035 WIZO95785 1651 aa42.31■■■■■ 4.36
C19orf47-202ENST00000392035 CHIC1Q5VXU3 224 aa41.9■■■■■ 4.3
C19orf47-202ENST00000392035 TOP2AP11388 1531 aaKnown RBP41.82■■■■■ 4.29
C19orf47-202ENST00000392035 PEG3Q9GZU2 1588 aa41.76■■■■■ 4.28
C19orf47-202ENST00000392035 ATAD2BQ9ULI0 1458 aa41.56■■■■■ 4.24
C19orf47-202ENST00000392035 SMARCA2P51531 1590 aa41.51■■■■■ 4.24
C19orf47-202ENST00000392035 EIF4G1Q04637 1599 aaKnown RBP41.51■■■■■ 4.24
C19orf47-202ENST00000392035 CCDC88BA6NC98 1476 aa41.43■■■■■ 4.22
C19orf47-202ENST00000392035 BAZ1BQ9UIG0 1483 aaKnown RBP41.34■■■■■ 4.21
C19orf47-202ENST00000392035 NCAPD3P42695 1498 aa41.13■■■■■ 4.17
C19orf47-202ENST00000392035 HMGXB3Q12766 1538 aa41.09■■■■■ 4.17
C19orf47-202ENST00000392035 TRIM41Q8WV44 630 aa40.98■■■■■ 4.15
C19orf47-202ENST00000392035 CC2D2AQ9P2K1 1620 aa40.84■■■■■ 4.13
C19orf47-202ENST00000392035 ABCC8Q09428 1581 aa40.68■■■■■ 4.1
C19orf47-202ENST00000392035 LOC105371045A0A1W2PR82 267 aa40.35■■■■■ 4.05
C19orf47-202ENST00000392035 WRNQ14191 1432 aaPredicted RBP eCLIP40.35■■■■■ 4.05
C19orf47-202ENST00000392035 CFTRP13569 1480 aa40.31■■■■■ 4.04
C19orf47-202ENST00000392035 FAM9AQ8IZU1 332 aaPredicted RBP40.3■■■■■ 4.04
C19orf47-202ENST00000392035 SYNJ1O43426 1573 aa40.2■■■■■ 4.03
C19orf47-202ENST00000392035 PRDM2Q13029 1718 aa40.13■■■■■ 4.01
C19orf47-202ENST00000392035 CADPSQ9ULU8 1353 aa40.11■■■■■ 4.01
C19orf47-202ENST00000392035 TOP2BQ02880 1626 aa39.99■■■■□ 3.99
C19orf47-202ENST00000392035 SOGA1O94964 1423 aa39.96■■■■□ 3.99
C19orf47-202ENST00000392035 BIVM-ERCC5R4GMW8 1640 aa39.94■■■■□ 3.98
C19orf47-202ENST00000392035 EEA1Q15075 1411 aa39.87■■■■□ 3.97
C19orf47-202ENST00000392035 CUX1P39880 1505 aa39.84■■■■□ 3.97
C19orf47-202ENST00000392035 RUSC2Q8N2Y8 1516 aa39.82■■■■□ 3.97
C19orf47-202ENST00000392035 DNAJC5BQ9UF47 199 aa39.8■■■■□ 3.96
C19orf47-202ENST00000392035 EHMT2Q96KQ7 1210 aa39.76■■■■□ 3.95
C19orf47-202ENST00000392035 NESP48681 1621 aa39.73■■■■□ 3.95
C19orf47-202ENST00000392035 LAMC3Q9Y6N6 1575 aa39.69■■■■□ 3.94
C19orf47-202ENST00000392035 FANCD2Q9BXW9 1451 aa39.69■■■■□ 3.94
C19orf47-202ENST00000392035 CSRNP3Q8WYN3 585 aa39.67■■■■□ 3.94
C19orf47-202ENST00000392035 CEP164Q9UPV0 1460 aa39.4■■■■□ 3.9
C19orf47-202ENST00000392035 PDS5BQ9NTI5 1447 aa39.38■■■■□ 3.89
C19orf47-202ENST00000392035 KIF21BO75037 1637 aa39.37■■■■□ 3.89
C19orf47-202ENST00000392035 GOLGA3Q08378 1498 aa39.37■■■■□ 3.89
C19orf47-202ENST00000392035 DNMBPQ6XZF7 1577 aa39.36■■■■□ 3.89
C19orf47-202ENST00000392035 FGD5Q6ZNL6 1462 aa39.35■■■■□ 3.89
C19orf47-202ENST00000392035 TNIKQ9UKE5 1360 aa39.29■■■■□ 3.88
C19orf47-202ENST00000392035 TOPBP1Q92547 1522 aa39.29■■■■□ 3.88
C19orf47-202ENST00000392035 KIF27Q86VH2 1401 aa39.29■■■■□ 3.88
C19orf47-202ENST00000392035 KIF21AQ7Z4S6 1674 aa39.24■■■■□ 3.87
C19orf47-202ENST00000392035 UBTFP17480 764 aaKnown RBP39.21■■■■□ 3.87
C19orf47-202ENST00000392035 URB2Q14146 1524 aaKnown RBP39.19■■■■□ 3.86
C19orf47-202ENST00000392035 CUX2O14529 1486 aa39.15■■■■□ 3.86
C19orf47-202ENST00000392035 RAPGEF2Q9Y4G8 1499 aa39.14■■■■□ 3.86
C19orf47-202ENST00000392035 CEP162Q5TB80 1403 aa39.13■■■■□ 3.85
C19orf47-202ENST00000392035 POLA1P09884 1462 aaPredicted RBP39.13■■■■□ 3.85
C19orf47-202ENST00000392035 PRXQ9BXM0 1461 aa39.1■■■■□ 3.85
C19orf47-202ENST00000392035 ERICH3Q5RHP9 1530 aa39.04■■■■□ 3.84
C19orf47-202ENST00000392035 RAD54L2Q9Y4B4 1467 aa39.02■■■■□ 3.84
C19orf47-202ENST00000392035 ABCA10Q8WWZ4 1543 aa38.99■■■■□ 3.83
C19orf47-202ENST00000392035 IGF1RP08069 1367 aa38.93■■■■□ 3.82
C19orf47-202ENST00000392035 MRC2Q9UBG0 1479 aa38.86■■■■□ 3.81
C19orf47-202ENST00000392035 WDR97A6NE52 1622 aa38.85■■■■□ 3.81
C19orf47-202ENST00000392035 PCGF6Q9BYE7 350 aa38.77■■■■□ 3.8
C19orf47-202ENST00000392035 CLIP1P30622 1438 aa38.75■■■■□ 3.79
C19orf47-202ENST00000392035 CARMIL1Q5VZK9 1371 aa38.74■■■■□ 3.79
C19orf47-202ENST00000392035 TARBP1Q13395 1621 aaKnown RBP38.68■■■■□ 3.78
C19orf47-202ENST00000392035 ABCA5Q8WWZ7 1642 aa38.66■■■■□ 3.78
C19orf47-202ENST00000392035 TRIM26Q12899 539 aaPredicted RBP38.65■■■■□ 3.78
C19orf47-202ENST00000392035 ERCC6Q03468 1493 aa38.65■■■■□ 3.78
C19orf47-202ENST00000392035 WDR62O43379 1518 aa38.65■■■■□ 3.78
C19orf47-202ENST00000392035 TDRD9Q8NDG6 1382 aaKnown RBP38.62■■■■□ 3.77
C19orf47-202ENST00000392035 CUL7Q14999 1698 aa38.59■■■■□ 3.77
C19orf47-202ENST00000392035 GAPVD1Q14C86 1478 aa38.57■■■■□ 3.77
C19orf47-202ENST00000392035 RANGAP1P46060 587 aaPredicted RBP38.55■■■■□ 3.76
C19orf47-202ENST00000392035 THOC2Q8NI27 1593 aaKnown RBP38.49■■■■□ 3.75
C19orf47-202ENST00000392035 PPARGC1BQ86YN6 1023 aaKnown RBP38.46■■■■□ 3.75
C19orf47-202ENST00000392035 VPS8Q8N3P4 1428 aa38.45■■■■□ 3.75
C19orf47-202ENST00000392035 IFT140Q96RY7 1462 aa38.43■■■■□ 3.74
C19orf47-202ENST00000392035 ARAP1Q96P48 1450 aa38.36■■■■□ 3.73
C19orf47-202ENST00000392035 PBRM1Q86U86 1689 aa38.35■■■■□ 3.73
C19orf47-202ENST00000392035 AQRO60306 1485 aaKnown RBP eCLIP38.33■■■■□ 3.732e-6■■■■■ 30.8
C19orf47-202ENST00000392035 ARHGAP35Q9NRY4 1499 aa38.3■■■■□ 3.72
C19orf47-202ENST00000392035 ZNF608Q9ULD9 1512 aaPredicted RBP38.27■■■■□ 3.72
C19orf47-202ENST00000392035 CTTNBP2Q8WZ74 1663 aa38.22■■■■□ 3.71
C19orf47-202ENST00000392035 GRIN2BQ13224 1484 aa38.21■■■■□ 3.71
C19orf47-202ENST00000392035 FHAD1B1AJZ9 1412 aa38.14■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms