Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO1P25800 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO1P25800 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO1P25800 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LMO1P25800 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LMO1P25800 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LMO1P25800 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.78■□□□□ 0.92
LMO1P25800 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LMO1P25800 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LMO1P25800 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LMO1P25800 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.77■□□□□ 0.92
LMO1P25800 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LMO1P25800 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
LMO1P25800 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.76■□□□□ 0.91
LMO1P25800 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LMO1P25800 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LMO1P25800 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LMO1P25800 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LMO1P25800 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LMO1P25800 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LMO1P25800 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LMO1P25800 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.75■□□□□ 0.91
LMO1P25800 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LMO1P25800 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LMO1P25800 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LMO1P25800 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LMO1P25800 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LMO1P25800 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
LMO1P25800 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LMO1P25800 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LMO1P25800 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LMO1P25800 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LMO1P25800 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.74■□□□□ 0.91
LMO1P25800 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LMO1P25800 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LMO1P25800 AP004609.3-201ENST00000610705 1884 ntBASIC20.73■□□□□ 0.91
LMO1P25800 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LMO1P25800 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LMO1P25800 CR559946.2-201ENST00000623684 991 ntBASIC20.73■□□□□ 0.91
LMO1P25800 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LMO1P25800 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LMO1P25800 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LMO1P25800 MIR219A2-201ENST00000608502 1504 ntBASIC20.73■□□□□ 0.91
LMO1P25800 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LMO1P25800 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LMO1P25800 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LMO1P25800 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.72■□□□□ 0.91
LMO1P25800 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LMO1P25800 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LMO1P25800 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.72■□□□□ 0.91
LMO1P25800 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.72■□□□□ 0.91
LMO1P25800 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.72■□□□□ 0.91
LMO1P25800 AC142472.1-201ENST00000612013 1741 ntBASIC20.72■□□□□ 0.91
LMO1P25800 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.71■□□□□ 0.91
LMO1P25800 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO1P25800 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LMO1P25800 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO1P25800 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LMO1P25800 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMO1P25800 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LMO1P25800 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LMO1P25800 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.7■□□□□ 0.9
LMO1P25800 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO1P25800 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
LMO1P25800 MIR3648-2-201ENST00000581792 180 ntBASIC20.7■□□□□ 0.9
LMO1P25800 MIR3648-1-201ENST00000615959 180 ntBASIC20.7■□□□□ 0.9
LMO1P25800 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO1P25800 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.7■□□□□ 0.9
LMO1P25800 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMO1P25800 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LMO1P25800 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMO1P25800 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LMO1P25800 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMO1P25800 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMO1P25800 HLA-V-202ENST00000446817 847 ntBASIC20.69■□□□□ 0.9
LMO1P25800 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.69■□□□□ 0.9
LMO1P25800 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.69■□□□□ 0.9
LMO1P25800 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.68■□□□□ 0.9
LMO1P25800 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.68■□□□□ 0.9
LMO1P25800 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.68■□□□□ 0.9
LMO1P25800 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO1P25800 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMO1P25800 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.67■□□□□ 0.9
LMO1P25800 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMO1P25800 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO1P25800 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMO1P25800 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.66■□□□□ 0.9
LMO1P25800 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.66■□□□□ 0.9
LMO1P25800 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMO1P25800 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMO1P25800 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.65■□□□□ 0.9
LMO1P25800 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.65■□□□□ 0.9
LMO1P25800 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.64■□□□□ 0.9
LMO1P25800 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.64■□□□□ 0.9
LMO1P25800 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMO1P25800 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMO1P25800 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMO1P25800 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMO1P25800 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LMO1P25800 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms