RNA–Protein interactions for RNA: ENST00000392358.6

GPS1-204, Transcript of G protein pathway suppressor 1, humanhuman

TSL 1 (best) BASIC

Gene GPS1, Length 2,276 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPS1-204ENST00000392358 NISCHQ9Y2I1 1504 aa51.56■■■■■ 5.84
GPS1-204ENST00000392358 CCDC180Q9P1Z9 1646 aa43.99■■■■■ 4.63
GPS1-204ENST00000392358 ZCCHC6Q5VYS8 1495 aaKnown RBP43.57■■■■■ 4.56
GPS1-204ENST00000392358 SHROOM4Q9ULL8 1493 aa43.55■■■■■ 4.56
GPS1-204ENST00000392358 DCAF8L2P0C7V8 631 aa42.63■■■■■ 4.41
GPS1-204ENST00000392358 SUPT5HO00267 1087 aaKnown RBP42.62■■■■■ 4.41
GPS1-204ENST00000392358 DCAF1Q9Y4B6 1507 aa42.4■■■■■ 4.38
GPS1-204ENST00000392358 CHIC1Q5VXU3 224 aa41.42■■■■■ 4.22
GPS1-204ENST00000392358 MYO15BQ96JP2 1530 aa41.3■■■■■ 4.2
GPS1-204ENST00000392358 ABCC9O60706 1549 aa41.11■■■■■ 4.17
GPS1-204ENST00000392358 SCRIBQ14160 1630 aa41.05■■■■■ 4.16
GPS1-204ENST00000392358 NACADO15069 1562 aa40.77■■■■■ 4.12
GPS1-204ENST00000392358 RSF1Q96T23 1441 aaPredicted RBP40.69■■■■■ 4.1
GPS1-204ENST00000392358 RB1CC1Q8TDY2 1594 aa40.23■■■■■ 4.03
GPS1-204ENST00000392358 CECR2Q9BXF3 1484 aa40.18■■■■■ 4.02
GPS1-204ENST00000392358 LOC105371045A0A1W2PR82 267 aa40.1■■■■■ 4.01
GPS1-204ENST00000392358 MROH2BQ7Z745 1585 aa40.03■■■■■ 4
GPS1-204ENST00000392358 TRIM41Q8WV44 630 aa39.8■■■■□ 3.96
GPS1-204ENST00000392358 WIZO95785 1651 aa39.77■■■■□ 3.96
GPS1-204ENST00000392358 PCGF6Q9BYE7 350 aa39.75■■■■□ 3.95
GPS1-204ENST00000392358 UNC13AQ9UPW8 1703 aa39.67■■■■□ 3.94
GPS1-204ENST00000392358 HRCP23327 699 aa39.64■■■■□ 3.94
GPS1-204ENST00000392358 BAZ1AQ9NRL2 1556 aaPredicted RBP39.62■■■■□ 3.93
GPS1-204ENST00000392358 FAM9AQ8IZU1 332 aaPredicted RBP39.35■■■■□ 3.89
GPS1-204ENST00000392358 SMARCA4P51532 1647 aa39.29■■■■□ 3.88
GPS1-204ENST00000392358 TOP2AP11388 1531 aaKnown RBP39.2■■■■□ 3.87
GPS1-204ENST00000392358 EIF4G1Q04637 1599 aaKnown RBP39.19■■■■□ 3.86
GPS1-204ENST00000392358 BICRAQ9NZM4 1560 aa39.19■■■■□ 3.86
GPS1-204ENST00000392358 TRIM26Q12899 539 aaPredicted RBP39.16■■■■□ 3.86
GPS1-204ENST00000392358 PABPN1Q86U42 306 aaKnown RBP eCLIP39.07■■■■□ 3.842e-7■■■□□ 16.2
GPS1-204ENST00000392358 CCDC88BA6NC98 1476 aa39.02■■■■□ 3.84
GPS1-204ENST00000392358 SMARCA2P51531 1590 aa38.97■■■■□ 3.83
GPS1-204ENST00000392358 EHMT2Q96KQ7 1210 aa38.92■■■■□ 3.82
GPS1-204ENST00000392358 PPARGC1BQ86YN6 1023 aaKnown RBP38.76■■■■□ 3.8
GPS1-204ENST00000392358 ABCC8Q09428 1581 aa38.75■■■■□ 3.79
GPS1-204ENST00000392358 PEG3Q9GZU2 1588 aa38.64■■■■□ 3.78
GPS1-204ENST00000392358 ATAD2BQ9ULI0 1458 aa38.38■■■■□ 3.73
GPS1-204ENST00000392358 SOGA1O94964 1423 aa38.38■■■■□ 3.73
GPS1-204ENST00000392358 EEA1Q15075 1411 aa38.23■■■■□ 3.71
GPS1-204ENST00000392358 BAZ1BQ9UIG0 1483 aaKnown RBP38.22■■■■□ 3.71
GPS1-204ENST00000392358 WRNQ14191 1432 aaPredicted RBP eCLIP38.21■■■■□ 3.71
GPS1-204ENST00000392358 ZEB1P37275 1124 aaPredicted RBP38.2■■■■□ 3.71
GPS1-204ENST00000392358 RUSC2Q8N2Y8 1516 aa38.19■■■■□ 3.7
GPS1-204ENST00000392358 CSRNP3Q8WYN3 585 aa38.17■■■■□ 3.7
GPS1-204ENST00000392358 TNIKQ9UKE5 1360 aa38.1■■■■□ 3.69
GPS1-204ENST00000392358 CEP162Q5TB80 1403 aa38.07■■■■□ 3.69
GPS1-204ENST00000392358 SYNJ1O43426 1573 aa38.01■■■■□ 3.67
GPS1-204ENST00000392358 UBTFP17480 764 aaKnown RBP37.91■■■■□ 3.66
GPS1-204ENST00000392358 GOLGA3Q08378 1498 aa37.9■■■■□ 3.66
GPS1-204ENST00000392358 NCAPD3P42695 1498 aa37.72■■■■□ 3.63
GPS1-204ENST00000392358 CEP164Q9UPV0 1460 aa37.72■■■■□ 3.63
GPS1-204ENST00000392358 HMGXB3Q12766 1538 aa37.68■■■■□ 3.62
GPS1-204ENST00000392358 KIF21BO75037 1637 aa37.68■■■■□ 3.62
GPS1-204ENST00000392358 TTBK1Q5TCY1 1321 aaPredicted RBP37.61■■■■□ 3.61
GPS1-204ENST00000392358 TOP2BQ02880 1626 aa37.61■■■■□ 3.61
GPS1-204ENST00000392358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.57■■■■□ 3.61
GPS1-204ENST00000392358 BIVM-ERCC5R4GMW8 1640 aa37.47■■■■□ 3.59
GPS1-204ENST00000392358 CCER1Q8TC90 406 aaPredicted RBP37.47■■■■□ 3.59
GPS1-204ENST00000392358 RAPGEF2Q9Y4G8 1499 aa37.46■■■■□ 3.59
GPS1-204ENST00000392358 CLIP1P30622 1438 aa37.43■■■■□ 3.58
GPS1-204ENST00000392358 CFTRP13569 1480 aa37.33■■■■□ 3.57
GPS1-204ENST00000392358 CUX1P39880 1505 aa37.29■■■■□ 3.56
GPS1-204ENST00000392358 VPS8Q8N3P4 1428 aa37.26■■■■□ 3.56
GPS1-204ENST00000392358 PRXQ9BXM0 1461 aa37.2■■■■□ 3.54
GPS1-204ENST00000392358 ERICH3Q5RHP9 1530 aa37.15■■■■□ 3.54
GPS1-204ENST00000392358 CC2D2AQ9P2K1 1620 aa37.13■■■■□ 3.53
GPS1-204ENST00000392358 RANGAP1P46060 587 aaPredicted RBP37.12■■■■□ 3.53
GPS1-204ENST00000392358 KIF27Q86VH2 1401 aa37.07■■■■□ 3.52
GPS1-204ENST00000392358 APLP2Q06481 763 aa37.01■■■■□ 3.52
GPS1-204ENST00000392358 CADPSQ9ULU8 1353 aa36.95■■■■□ 3.51
GPS1-204ENST00000392358 PRDM2Q13029 1718 aa36.95■■■■□ 3.5
GPS1-204ENST00000392358 ARAP1Q96P48 1450 aa36.88■■■■□ 3.49
GPS1-204ENST00000392358 HNRNPUL2Q1KMD3 747 aaKnown RBP36.87■■■■□ 3.49
GPS1-204ENST00000392358 CUX2O14529 1486 aa36.73■■■■□ 3.47
GPS1-204ENST00000392358 IGF1RP08069 1367 aa36.71■■■■□ 3.47
GPS1-204ENST00000392358 FGD5Q6ZNL6 1462 aa36.65■■■■□ 3.46
GPS1-204ENST00000392358 KANK4Q5T7N3 995 aaPredicted RBP36.62■■■■□ 3.45
GPS1-204ENST00000392358 ARHGAP35Q9NRY4 1499 aa36.62■■■■□ 3.45
GPS1-204ENST00000392358 DIEXFQ68CQ4 756 aaKnown RBP36.59■■■■□ 3.45
GPS1-204ENST00000392358 FANCD2Q9BXW9 1451 aa36.55■■■■□ 3.44
GPS1-204ENST00000392358 CARMIL1Q5VZK9 1371 aa36.52■■■■□ 3.44
GPS1-204ENST00000392358 NESP48681 1621 aa36.44■■■■□ 3.42
GPS1-204ENST00000392358 ZNF316A6NFI3 1004 aaPredicted RBP36.44■■■■□ 3.42
GPS1-204ENST00000392358 RRBP1Q9P2E9 1410 aaKnown RBP36.38■■■■□ 3.41
GPS1-204ENST00000392358 DNMBPQ6XZF7 1577 aa36.35■■■■□ 3.41
GPS1-204ENST00000392358 TOPBP1Q92547 1522 aa36.3■■■■□ 3.4
GPS1-204ENST00000392358 RAD54L2Q9Y4B4 1467 aa36.3■■■■□ 3.4
GPS1-204ENST00000392358 DNAJC5BQ9UF47 199 aa36.28■■■■□ 3.4
GPS1-204ENST00000392358 SCAF1Q9H7N4 1312 aaKnown RBP36.27■■■■□ 3.4
GPS1-204ENST00000392358 ABCA10Q8WWZ4 1543 aa36.27■■■■□ 3.4
GPS1-204ENST00000392358 POLA1P09884 1462 aaPredicted RBP36.27■■■■□ 3.4
GPS1-204ENST00000392358 LAMC3Q9Y6N6 1575 aa36.23■■■■□ 3.39
GPS1-204ENST00000392358 DHX57Q6P158 1386 aaKnown RBP36.22■■■■□ 3.39
GPS1-204ENST00000392358 CCNB3Q8WWL7 1395 aa36.22■■■■□ 3.39
GPS1-204ENST00000392358 MAP3K1Q13233 1512 aa36.19■■■■□ 3.38
GPS1-204ENST00000392358 CLSPNQ9HAW4 1339 aa36.19■■■■□ 3.38
GPS1-204ENST00000392358 TIAM1Q13009 1591 aa36.16■■■■□ 3.38
GPS1-204ENST00000392358 ACIN1Q9UKV3 1341 aaKnown RBP36.09■■■■□ 3.37
GPS1-204ENST00000392358 FHAD1B1AJZ9 1412 aa36.07■■■■□ 3.37
GPS1-204ENST00000392358 NEUROD1Q13562 356 aa36.05■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms