RNA–Protein interactions for RNA: ENST00000519148.5

TOP1MT-208, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2 BASIC

Gene TOP1MT, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-208ENST00000519148 NISCHQ9Y2I1 1504 aa55.51■■■■■ 6.48
TOP1MT-208ENST00000519148 CCDC180Q9P1Z9 1646 aa48.59■■■■■ 5.37
TOP1MT-208ENST00000519148 ZCCHC6Q5VYS8 1495 aaKnown RBP46.62■■■■■ 5.05
TOP1MT-208ENST00000519148 DCAF1Q9Y4B6 1507 aa45.96■■■■■ 4.95
TOP1MT-208ENST00000519148 ABCC9O60706 1549 aa45.94■■■■■ 4.95
TOP1MT-208ENST00000519148 DCAF8L2P0C7V8 631 aa45.7■■■■■ 4.91
TOP1MT-208ENST00000519148 MYO15BQ96JP2 1530 aa45.49■■■■■ 4.87
TOP1MT-208ENST00000519148 NACADO15069 1562 aa45.24■■■■■ 4.83
TOP1MT-208ENST00000519148 SHROOM4Q9ULL8 1493 aa45.01■■■■■ 4.8
TOP1MT-208ENST00000519148 RB1CC1Q8TDY2 1594 aa44.89■■■■■ 4.78
TOP1MT-208ENST00000519148 SCRIBQ14160 1630 aa44.56■■■■■ 4.72
TOP1MT-208ENST00000519148 UNC13AQ9UPW8 1703 aa44.05■■■■■ 4.64
TOP1MT-208ENST00000519148 BICRAQ9NZM4 1560 aa43.54■■■■■ 4.56
TOP1MT-208ENST00000519148 PABPN1Q86U42 306 aaKnown RBP eCLIP43.22■■■■■ 4.51
TOP1MT-208ENST00000519148 SUPT5HO00267 1087 aaKnown RBP43.21■■■■■ 4.51
TOP1MT-208ENST00000519148 CECR2Q9BXF3 1484 aa43.1■■■■■ 4.49
TOP1MT-208ENST00000519148 RSF1Q96T23 1441 aaPredicted RBP42.96■■■■■ 4.47
TOP1MT-208ENST00000519148 BAZ1AQ9NRL2 1556 aaPredicted RBP42.89■■■■■ 4.46
TOP1MT-208ENST00000519148 MROH2BQ7Z745 1585 aa42.86■■■■■ 4.45
TOP1MT-208ENST00000519148 SMARCA4P51532 1647 aa42.75■■■■■ 4.43
TOP1MT-208ENST00000519148 WIZO95785 1651 aa42.53■■■■■ 4.4
TOP1MT-208ENST00000519148 PEG3Q9GZU2 1588 aa42.26■■■■■ 4.36
TOP1MT-208ENST00000519148 EIF4G1Q04637 1599 aaKnown RBP42.22■■■■■ 4.35
TOP1MT-208ENST00000519148 TOP2AP11388 1531 aaKnown RBP42.1■■■■■ 4.33
TOP1MT-208ENST00000519148 SMARCA2P51531 1590 aa42.05■■■■■ 4.32
TOP1MT-208ENST00000519148 ATAD2BQ9ULI0 1458 aa42.03■■■■■ 4.32
TOP1MT-208ENST00000519148 BAZ1BQ9UIG0 1483 aaKnown RBP41.79■■■■■ 4.28
TOP1MT-208ENST00000519148 NCAPD3P42695 1498 aa41.72■■■■■ 4.27
TOP1MT-208ENST00000519148 HMGXB3Q12766 1538 aa41.7■■■■■ 4.27
TOP1MT-208ENST00000519148 CC2D2AQ9P2K1 1620 aa41.64■■■■■ 4.26
TOP1MT-208ENST00000519148 CCDC88BA6NC98 1476 aa41.61■■■■■ 4.25
TOP1MT-208ENST00000519148 CHIC1Q5VXU3 224 aa41.6■■■■■ 4.25
TOP1MT-208ENST00000519148 CFTRP13569 1480 aa40.75■■■■■ 4.11
TOP1MT-208ENST00000519148 ABCC8Q09428 1581 aa40.69■■■■■ 4.1
TOP1MT-208ENST00000519148 TRIM41Q8WV44 630 aa40.67■■■■■ 4.1
TOP1MT-208ENST00000519148 PRDM2Q13029 1718 aa40.66■■■■■ 4.1
TOP1MT-208ENST00000519148 DNAJC5BQ9UF47 199 aa40.62■■■■■ 4.09
TOP1MT-208ENST00000519148 CADPSQ9ULU8 1353 aa40.6■■■■■ 4.09
TOP1MT-208ENST00000519148 WRNQ14191 1432 aaPredicted RBP eCLIP40.44■■■■■ 4.06
TOP1MT-208ENST00000519148 LAMC3Q9Y6N6 1575 aa40.37■■■■■ 4.05
TOP1MT-208ENST00000519148 SYNJ1O43426 1573 aa40.32■■■■■ 4.05
TOP1MT-208ENST00000519148 NESP48681 1621 aa40.3■■■■■ 4.04
TOP1MT-208ENST00000519148 TOP2BQ02880 1626 aa40.2■■■■■ 4.03
TOP1MT-208ENST00000519148 BIVM-ERCC5R4GMW8 1640 aa40.19■■■■■ 4.02
TOP1MT-208ENST00000519148 FANCD2Q9BXW9 1451 aa40.17■■■■■ 4.02
TOP1MT-208ENST00000519148 CUX1P39880 1505 aa40.1■■■■■ 4.01
TOP1MT-208ENST00000519148 LOC105371045A0A1W2PR82 267 aa40.05■■■■■ 4
TOP1MT-208ENST00000519148 PDS5BQ9NTI5 1447 aa40■■■■□ 3.99
TOP1MT-208ENST00000519148 CEP164Q9UPV0 1460 aa39.95■■■■□ 3.99
TOP1MT-208ENST00000519148 KIF21AQ7Z4S6 1674 aa39.9■■■■□ 3.98
TOP1MT-208ENST00000519148 FAM9AQ8IZU1 332 aaPredicted RBP39.87■■■■□ 3.97
TOP1MT-208ENST00000519148 SOGA1O94964 1423 aa39.85■■■■□ 3.97
TOP1MT-208ENST00000519148 DNMBPQ6XZF7 1577 aa39.83■■■■□ 3.97
TOP1MT-208ENST00000519148 EEA1Q15075 1411 aa39.8■■■■□ 3.96
TOP1MT-208ENST00000519148 TOPBP1Q92547 1522 aa39.73■■■■□ 3.95
TOP1MT-208ENST00000519148 RUSC2Q8N2Y8 1516 aa39.71■■■■□ 3.95
TOP1MT-208ENST00000519148 URB2Q14146 1524 aaKnown RBP39.69■■■■□ 3.94
TOP1MT-208ENST00000519148 FGD5Q6ZNL6 1462 aa39.68■■■■□ 3.94
TOP1MT-208ENST00000519148 POLA1P09884 1462 aaPredicted RBP39.52■■■■□ 3.92
TOP1MT-208ENST00000519148 MRC2Q9UBG0 1479 aa39.52■■■■□ 3.92
TOP1MT-208ENST00000519148 CSRNP3Q8WYN3 585 aa39.51■■■■□ 3.92
TOP1MT-208ENST00000519148 KIF27Q86VH2 1401 aa39.44■■■■□ 3.9
TOP1MT-208ENST00000519148 ERCC6Q03468 1493 aa39.42■■■■□ 3.9
TOP1MT-208ENST00000519148 CUX2O14529 1486 aa39.36■■■■□ 3.89
TOP1MT-208ENST00000519148 WDR62O43379 1518 aa39.35■■■■□ 3.89
TOP1MT-208ENST00000519148 ABCA10Q8WWZ4 1543 aa39.35■■■■□ 3.89
TOP1MT-208ENST00000519148 RAD54L2Q9Y4B4 1467 aa39.35■■■■□ 3.89
TOP1MT-208ENST00000519148 KIF21BO75037 1637 aa39.34■■■■□ 3.89
TOP1MT-208ENST00000519148 WDR97A6NE52 1622 aa39.32■■■■□ 3.88
TOP1MT-208ENST00000519148 THOC2Q8NI27 1593 aaKnown RBP39.29■■■■□ 3.88
TOP1MT-208ENST00000519148 EHMT2Q96KQ7 1210 aa39.26■■■■□ 3.88
TOP1MT-208ENST00000519148 GOLGA3Q08378 1498 aa39.22■■■■□ 3.87
TOP1MT-208ENST00000519148 TARBP1Q13395 1621 aaKnown RBP39.2■■■■□ 3.87
TOP1MT-208ENST00000519148 PCGF6Q9BYE7 350 aa39.2■■■■□ 3.87
TOP1MT-208ENST00000519148 PRXQ9BXM0 1461 aa39.15■■■■□ 3.86
TOP1MT-208ENST00000519148 ERICH3Q5RHP9 1530 aa39.1■■■■□ 3.85
TOP1MT-208ENST00000519148 ABCA5Q8WWZ7 1642 aa39.09■■■■□ 3.85
TOP1MT-208ENST00000519148 IGF1RP08069 1367 aa39.08■■■■□ 3.85
TOP1MT-208ENST00000519148 RAPGEF2Q9Y4G8 1499 aa39.07■■■■□ 3.85
TOP1MT-208ENST00000519148 TNIKQ9UKE5 1360 aa39.05■■■■□ 3.84
TOP1MT-208ENST00000519148 IFT140Q96RY7 1462 aa39.01■■■■□ 3.83
TOP1MT-208ENST00000519148 UBTFP17480 764 aaKnown RBP38.96■■■■□ 3.83
TOP1MT-208ENST00000519148 TRIM26Q12899 539 aaPredicted RBP38.96■■■■□ 3.83
TOP1MT-208ENST00000519148 TDRD9Q8NDG6 1382 aaKnown RBP38.96■■■■□ 3.83
TOP1MT-208ENST00000519148 GAPVD1Q14C86 1478 aa38.94■■■■□ 3.82
TOP1MT-208ENST00000519148 CUL7Q14999 1698 aa38.91■■■■□ 3.82
TOP1MT-208ENST00000519148 CARMIL1Q5VZK9 1371 aa38.89■■■■□ 3.82
TOP1MT-208ENST00000519148 PBRM1Q86U86 1689 aa38.83■■■■□ 3.81
TOP1MT-208ENST00000519148 CEP162Q5TB80 1403 aa38.82■■■■□ 3.81
TOP1MT-208ENST00000519148 HRCP23327 699 aa38.81■■■■□ 3.8
TOP1MT-208ENST00000519148 ZNF608Q9ULD9 1512 aaPredicted RBP38.77■■■■□ 3.8
TOP1MT-208ENST00000519148 AQRO60306 1485 aaKnown RBP eCLIP38.75■■■■□ 3.795e-15■■■■■ 69.3
TOP1MT-208ENST00000519148 EIF4G3O43432 1585 aaKnown RBP38.7■■■■□ 3.79
TOP1MT-208ENST00000519148 GRIN2BQ13224 1484 aa38.68■■■■□ 3.78
TOP1MT-208ENST00000519148 ADAMTS12P58397 1594 aa38.58■■■■□ 3.77
TOP1MT-208ENST00000519148 CLIP1P30622 1438 aa38.57■■■■□ 3.76
TOP1MT-208ENST00000519148 FHAD1B1AJZ9 1412 aa38.53■■■■□ 3.76
TOP1MT-208ENST00000519148 CTTNBP2Q8WZ74 1663 aa38.47■■■■□ 3.75
TOP1MT-208ENST00000519148 SNAPC4Q5SXM2 1469 aa38.43■■■■□ 3.74
TOP1MT-208ENST00000519148 MAGI1Q96QZ7 1491 aaPredicted RBP38.39■■■■□ 3.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms